RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 FBN3Q75N90 2809 aa5.29□□□□□ -1.56
LDB3-201ENST00000263066 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
LDB3-201ENST00000263066 Q6ZR54 194 aa5.28□□□□□ -1.56
LDB3-201ENST00000263066 NBDYA0A0U1RRE5 68 aa5.28□□□□□ -1.56
LDB3-201ENST00000263066 CRIPTQ9P021 101 aa5.28□□□□□ -1.56
LDB3-201ENST00000263066 SPRR4Q96PI1 79 aa5.27□□□□□ -1.57
LDB3-201ENST00000263066 K7ERS5 55 aa5.27□□□□□ -1.57
LDB3-201ENST00000263066 GVQW2A0A096LPI5 108 aaPredicted RBP5.27□□□□□ -1.57
LDB3-201ENST00000263066 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
LDB3-201ENST00000263066 FAM168BA1KXE4 195 aa5.26□□□□□ -1.57
LDB3-201ENST00000263066 VPS13DQ5THJ4 4388 aa5.25□□□□□ -1.57
LDB3-201ENST00000263066 CNBPP62633 177 aaKnown RBP5.25□□□□□ -1.57
LDB3-201ENST00000263066 LINC01556Q5JQF7 62 aa5.23□□□□□ -1.57
LDB3-201ENST00000263066 HYDINQ4G0P3 5121 aa5.23□□□□□ -1.57
LDB3-201ENST00000263066 ROMO1P60602 79 aa5.23□□□□□ -1.57
LDB3-201ENST00000263066 TNP2Q05952 138 aa5.23□□□□□ -1.57
LDB3-201ENST00000263066 C14orf177Q52M58 125 aa5.22□□□□□ -1.57
LDB3-201ENST00000263066 APLNQ9ULZ1 77 aa5.22□□□□□ -1.57
LDB3-201ENST00000263066 FAT2Q9NYQ8 4349 aa5.22□□□□□ -1.57
LDB3-201ENST00000263066 DNAH6Q9C0G6 4158 aa5.2□□□□□ -1.58
LDB3-201ENST00000263066 ASB16-AS1Q495Z4 193 aa5.2□□□□□ -1.58
LDB3-201ENST00000263066 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
LDB3-201ENST00000263066 KRTAP1-5Q9BYS1 174 aa5.18□□□□□ -1.58
LDB3-201ENST00000263066 IGLV5-37A0A075B6J1 123 aa5.18□□□□□ -1.58
LDB3-201ENST00000263066 RTL8CO15255 209 aa5.18□□□□□ -1.58
LDB3-201ENST00000263066 PLA2G2DQ9UNK4 145 aa5.18□□□□□ -1.58
LDB3-201ENST00000263066 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
LDB3-201ENST00000263066 MRPL34Q9BQ48 92 aaKnown RBP5.17□□□□□ -1.58
LDB3-201ENST00000263066 PKD1P98161 4303 aa5.16□□□□□ -1.58
LDB3-201ENST00000263066 MMP24-AS1A0A0U1RRL7 71 aa5.16□□□□□ -1.58
LDB3-201ENST00000263066 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
LDB3-201ENST00000263066 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.58
LDB3-201ENST00000263066 IGKV2D-30A0A075B6S6 120 aa5.15□□□□□ -1.59
LDB3-201ENST00000263066 IGKV2-30P06310 120 aa5.15□□□□□ -1.59
LDB3-201ENST00000263066 PRR34Q9NV39 138 aa5.15□□□□□ -1.59
LDB3-201ENST00000263066 H3BNG1 76 aa5.14□□□□□ -1.59
LDB3-201ENST00000263066 C15orf56Q8N910 161 aa5.14□□□□□ -1.59
LDB3-201ENST00000263066 FAM229AH3BQW9 127 aa5.14□□□□□ -1.59
LDB3-201ENST00000263066 DNAH8Q96JB1 4490 aa5.14□□□□□ -1.59
LDB3-201ENST00000263066 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
LDB3-201ENST00000263066 MEGF8Q7Z7M0 2845 aa5.13□□□□□ -1.59
LDB3-201ENST00000263066 A0A087WTM6 91 aa5.13□□□□□ -1.59
LDB3-201ENST00000263066 ALMS1Q8TCU4 4167 aa5.12□□□□□ -1.59
LDB3-201ENST00000263066 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
LDB3-201ENST00000263066 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
LDB3-201ENST00000263066 DNAH11Q96DT5 4516 aa5.1□□□□□ -1.59
LDB3-201ENST00000263066 DNAH17Q9UFH2 4485 aa5.1□□□□□ -1.59
LDB3-201ENST00000263066 PLAC8Q9NZF1 115 aa5.09□□□□□ -1.59
LDB3-201ENST00000263066 A0A1B0GVX0 72 aa5.09□□□□□ -1.6
LDB3-201ENST00000263066 LINC00472Q9H8W2 130 aa5.08□□□□□ -1.6
LDB3-201ENST00000263066 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
LDB3-201ENST00000263066 ZNF861PO60384 105 aa5.06□□□□□ -1.6
LDB3-201ENST00000263066 KRTAP10-2P60368 255 aa5.06□□□□□ -1.6
LDB3-201ENST00000263066 DNAH5Q8TE73 4624 aa5.06□□□□□ -1.6
LDB3-201ENST00000263066 A8MUU9 505 aa5.05□□□□□ -1.6
LDB3-201ENST00000263066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.04□□□□□ -1.6
LDB3-201ENST00000263066 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
LDB3-201ENST00000263066 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
LDB3-201ENST00000263066 SPRR1AP35321 89 aa5.02□□□□□ -1.61
LDB3-201ENST00000263066 KRTAP21-3Q3LHN1 58 aa5.02□□□□□ -1.61
LDB3-201ENST00000263066 IGLV7-43P04211 117 aa5.01□□□□□ -1.61
LDB3-201ENST00000263066 DMAC1Q96GE9 116 aa5.01□□□□□ -1.61
LDB3-201ENST00000263066 VPS13BQ7Z7G8 4022 aa5.01□□□□□ -1.61
LDB3-201ENST00000263066 A0A087X002 238 aa5□□□□□ -1.61
LDB3-201ENST00000263066 KRTAP4-16G5E9R7 235 aaPredicted RBP4.99□□□□□ -1.61
LDB3-201ENST00000263066 LINC00483Q53H64 154 aa4.99□□□□□ -1.61
LDB3-201ENST00000263066 PANO1I0J062 215 aa4.99□□□□□ -1.61
LDB3-201ENST00000263066 TLX1NBP0CAT3 122 aa4.99□□□□□ -1.61
LDB3-201ENST00000263066 Q5W150 140 aa4.97□□□□□ -1.61
LDB3-201ENST00000263066 KRTAP26-1Q6PEX3 210 aa4.97□□□□□ -1.61
LDB3-201ENST00000263066 Q8N1X5 172 aa4.97□□□□□ -1.61
LDB3-201ENST00000263066 C20orf166-AS1Q96NR2 134 aa4.97□□□□□ -1.61
LDB3-201ENST00000263066 KRTAP10-1P60331 282 aa4.97□□□□□ -1.61
LDB3-201ENST00000263066 SPACA4Q8TDM5 124 aa4.97□□□□□ -1.61
LDB3-201ENST00000263066 PSORS1C2Q9UIG4 136 aa4.97□□□□□ -1.61
LDB3-201ENST00000263066 NOTCH2NLQ7Z3S9 236 aa4.96□□□□□ -1.62
LDB3-201ENST00000263066 A0A1B0GU33 70 aa4.96□□□□□ -1.62
LDB3-201ENST00000263066 KMT2CQ8NEZ4 4911 aaKnown RBP4.95□□□□□ -1.62
LDB3-201ENST00000263066 SACSQ9NZJ4 4579 aa4.95□□□□□ -1.62
LDB3-201ENST00000263066 P0C880 135 aa4.94□□□□□ -1.62
LDB3-201ENST00000263066 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
LDB3-201ENST00000263066 A0A0D9SG42 100 aa4.93□□□□□ -1.62
LDB3-201ENST00000263066 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.63
LDB3-201ENST00000263066 RYR3Q15413 4870 aa4.88□□□□□ -1.63
LDB3-201ENST00000263066 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
LDB3-201ENST00000263066 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
LDB3-201ENST00000263066 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.63
LDB3-201ENST00000263066 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
LDB3-201ENST00000263066 Q5VSD8 79 aa4.84□□□□□ -1.63
LDB3-201ENST00000263066 SPRR1BP22528 89 aa4.82□□□□□ -1.64
LDB3-201ENST00000263066 C9orf92A6NGG3 77 aa4.82□□□□□ -1.64
LDB3-201ENST00000263066 Q96NJ1 140 aa4.81□□□□□ -1.64
LDB3-201ENST00000263066 H0YAA0 97 aa4.79□□□□□ -1.64
LDB3-201ENST00000263066 Q6ZSA8 131 aa4.79□□□□□ -1.64
LDB3-201ENST00000263066 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
LDB3-201ENST00000263066 H1FX-AS1Q4G0G2 97 aa4.78□□□□□ -1.64
LDB3-201ENST00000263066 RYR2Q92736 4967 aa4.76□□□□□ -1.65
LDB3-201ENST00000263066 PKHD1L1Q86WI1 4243 aa4.75□□□□□ -1.65
LDB3-201ENST00000263066 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
LDB3-201ENST00000263066 APOBP04114 4563 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms