RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 MRPL34Q9BQ48 92 aaKnown RBP2.9□□□□□ -1.94
USP44-201ENST00000258499 A0A1B0GVX0 72 aa2.9□□□□□ -1.95
USP44-201ENST00000258499 CSMD3Q7Z407 3707 aa2.89□□□□□ -1.95
USP44-201ENST00000258499 KRTAP29-1A8MX34 341 aaPredicted RBP2.89□□□□□ -1.95
USP44-201ENST00000258499 ZNF861PO60384 105 aa2.89□□□□□ -1.95
USP44-201ENST00000258499 SPRR1BP22528 89 aa2.89□□□□□ -1.95
USP44-201ENST00000258499 SPANXA2-OT1Q8N9U9 137 aa2.89□□□□□ -1.95
USP44-201ENST00000258499 LCE6AA0A183 80 aa2.88□□□□□ -1.95
USP44-201ENST00000258499 COL7A1Q02388 2944 aa2.88□□□□□ -1.95
USP44-201ENST00000258499 TGP01266 2768 aa2.88□□□□□ -1.95
USP44-201ENST00000258499 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
USP44-201ENST00000258499 IGKV2-30P06310 120 aa2.88□□□□□ -1.95
USP44-201ENST00000258499 Q8N9P0 234 aaPredicted RBP2.88□□□□□ -1.95
USP44-201ENST00000258499 SPACA4Q8TDM5 124 aa2.88□□□□□ -1.95
USP44-201ENST00000258499 CD164Q04900 197 aa2.87□□□□□ -1.95
USP44-201ENST00000258499 PRR26Q8N8Z3 221 aa2.87□□□□□ -1.95
USP44-201ENST00000258499 A8MU10 97 aa2.87□□□□□ -1.95
USP44-201ENST00000258499 Q5VV11 94 aa2.87□□□□□ -1.95
USP44-201ENST00000258499 SPINK1P00995 79 aa2.86□□□□□ -1.95
USP44-201ENST00000258499 IGLV7-46A0A075B6I9 117 aa2.86□□□□□ -1.95
USP44-201ENST00000258499 LOC101927531A0A1B0GV80 90 aa2.86□□□□□ -1.95
USP44-201ENST00000258499 A0A087X002 238 aa2.86□□□□□ -1.95
USP44-201ENST00000258499 NOTCH2NLQ7Z3S9 236 aa2.86□□□□□ -1.95
USP44-201ENST00000258499 LINC00313P59037 77 aa2.85□□□□□ -1.95
USP44-201ENST00000258499 WWC2-AS2Q96NR7 200 aa2.85□□□□□ -1.95
USP44-201ENST00000258499 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
USP44-201ENST00000258499 ACYP2P14621 99 aa2.84□□□□□ -1.95
USP44-201ENST00000258499 A0A1B0GU69 56 aa2.83□□□□□ -1.96
USP44-201ENST00000258499 HRES1P13985 223 aa2.83□□□□□ -1.96
USP44-201ENST00000258499 Q6ZRN7 208 aaPredicted RBP2.83□□□□□ -1.96
USP44-201ENST00000258499 J3QL48 77 aa2.82□□□□□ -1.96
USP44-201ENST00000258499 KRTAP13-1Q8IUC0 172 aa2.82□□□□□ -1.96
USP44-201ENST00000258499 FAM229AH3BQW9 127 aa2.82□□□□□ -1.96
USP44-201ENST00000258499 ATP11AUNQ6ZP68 121 aa2.82□□□□□ -1.96
USP44-201ENST00000258499 C7orf65Q6ZTY9 151 aa2.82□□□□□ -1.96
USP44-201ENST00000258499 PLAC8Q9NZF1 115 aa2.82□□□□□ -1.96
USP44-201ENST00000258499 SSBP3-AS1Q7Z2R9 100 aa2.81□□□□□ -1.96
USP44-201ENST00000258499 Q96NJ1 140 aa2.81□□□□□ -1.96
USP44-201ENST00000258499 Q5W150 140 aa2.81□□□□□ -1.96
USP44-201ENST00000258499 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
USP44-201ENST00000258499 SPINK7P58062 85 aa2.81□□□□□ -1.96
USP44-201ENST00000258499 Q75L30 129 aa2.81□□□□□ -1.96
USP44-201ENST00000258499 PLA2G1BP04054 148 aaKnown RBP2.8□□□□□ -1.96
USP44-201ENST00000258499 LINC00483Q53H64 154 aa2.8□□□□□ -1.96
USP44-201ENST00000258499 LCA10Q71F78 164 aa2.8□□□□□ -1.96
USP44-201ENST00000258499 TYMSOSQ8TAI1 123 aa2.8□□□□□ -1.96
USP44-201ENST00000258499 CDC42SE1Q9NRR8 79 aa2.8□□□□□ -1.96
USP44-201ENST00000258499 FBN3Q75N90 2809 aa2.8□□□□□ -1.96
USP44-201ENST00000258499 Q6ZR54 194 aa2.79□□□□□ -1.96
USP44-201ENST00000258499 LINC01558Q9Y6Z2 57 aa2.79□□□□□ -1.96
USP44-201ENST00000258499 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
USP44-201ENST00000258499 KRTAP10-2P60368 255 aa2.79□□□□□ -1.96
USP44-201ENST00000258499 Q8N1X5 172 aa2.77□□□□□ -1.97
USP44-201ENST00000258499 SMR3BP02814 79 aaPredicted RBP2.77□□□□□ -1.97
USP44-201ENST00000258499 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
USP44-201ENST00000258499 DMBT1Q9UGM3 2413 aaPredicted RBP2.75□□□□□ -1.97
USP44-201ENST00000258499 UQCR11O14957 56 aa2.75□□□□□ -1.97
USP44-201ENST00000258499 MIR22HGQ0VDD5 57 aa2.75□□□□□ -1.97
USP44-201ENST00000258499 RBM12B-AS1Q9P1G2 102 aa2.75□□□□□ -1.97
USP44-201ENST00000258499 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
USP44-201ENST00000258499 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
USP44-201ENST00000258499 PRAC1Q96KF2 57 aa2.75□□□□□ -1.97
USP44-201ENST00000258499 MEGF8Q7Z7M0 2845 aa2.74□□□□□ -1.97
USP44-201ENST00000258499 ANK2Q01484 3957 aa2.74□□□□□ -1.97
USP44-201ENST00000258499 H3BS24 57 aa2.74□□□□□ -1.97
USP44-201ENST00000258499 LCE5AQ5TCM9 118 aa2.74□□□□□ -1.97
USP44-201ENST00000258499 ASB16-AS1Q495Z4 193 aa2.73□□□□□ -1.97
USP44-201ENST00000258499 DNAH10Q8IVF4 4471 aa2.73□□□□□ -1.97
USP44-201ENST00000258499 LINC00304Q8N9R0 145 aa2.73□□□□□ -1.97
USP44-201ENST00000258499 DMAC1Q96GE9 116 aa2.73□□□□□ -1.97
USP44-201ENST00000258499 HUWE1Q7Z6Z7 4374 aaKnown RBP2.73□□□□□ -1.97
USP44-201ENST00000258499 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
USP44-201ENST00000258499 A6NN06 94 aa2.71□□□□□ -1.98
USP44-201ENST00000258499 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.98
USP44-201ENST00000258499 K7ERS5 55 aa2.69□□□□□ -1.98
USP44-201ENST00000258499 ADM2Q7Z4H4 148 aa2.69□□□□□ -1.98
USP44-201ENST00000258499 LYSTQ99698 3801 aa2.67□□□□□ -1.98
USP44-201ENST00000258499 KRTAP13-3Q3SY46 172 aa2.66□□□□□ -1.98
USP44-201ENST00000258499 KRTAP1-4P0C5Y4 121 aa2.65□□□□□ -1.99
USP44-201ENST00000258499 CSAG1Q6PB30 78 aa2.65□□□□□ -1.99
USP44-201ENST00000258499 PLECQ15149 4684 aaKnown RBP2.64□□□□□ -1.99
USP44-201ENST00000258499 SPATA8Q6RVD6 105 aa2.64□□□□□ -1.99
USP44-201ENST00000258499 A0A1B0GU33 70 aa2.64□□□□□ -1.99
USP44-201ENST00000258499 DNAH9Q9NYC9 4486 aa2.63□□□□□ -1.99
USP44-201ENST00000258499 KRTAP16-1A8MUX0 517 aa2.63□□□□□ -1.99
USP44-201ENST00000258499 LINC01554Q52M75 96 aa2.63□□□□□ -1.99
USP44-201ENST00000258499 Q6ZSA8 131 aa2.63□□□□□ -1.99
USP44-201ENST00000258499 CRIPTQ9P021 101 aa2.63□□□□□ -1.99
USP44-201ENST00000258499 A0A0D9SG42 100 aa2.62□□□□□ -1.99
USP44-201ENST00000258499 DNAH1Q9P2D7 4330 aa2.59□□□□□ -2
USP44-201ENST00000258499 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -2
USP44-201ENST00000258499 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
USP44-201ENST00000258499 DNAH7Q8WXX0 4024 aa2.58□□□□□ -2
USP44-201ENST00000258499 CMYA5Q8N3K9 4069 aa2.57□□□□□ -2
USP44-201ENST00000258499 H1FX-AS1Q4G0G2 97 aa2.57□□□□□ -2
USP44-201ENST00000258499 FRAS1Q86XX4 4008 aa2.57□□□□□ -2
USP44-201ENST00000258499 KMT2AQ03164 3969 aa2.57□□□□□ -2
USP44-201ENST00000258499 DNAH11Q96DT5 4516 aa2.56□□□□□ -2
USP44-201ENST00000258499 LCE4AQ5TA78 99 aa2.56□□□□□ -2
USP44-201ENST00000258499 PRKDCP78527 4128 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms