RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 PCOTHQ58A44 107 aa5.76□□□□□ -1.49
RPA1-201ENST00000254719 APOBP04114 4563 aaKnown RBP5.75□□□□□ -1.49
RPA1-201ENST00000254719 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
RPA1-201ENST00000254719 ZNF861PO60384 105 aa5.74□□□□□ -1.49
RPA1-201ENST00000254719 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
RPA1-201ENST00000254719 ACYP2P14621 99 aa5.73□□□□□ -1.49
RPA1-201ENST00000254719 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
RPA1-201ENST00000254719 A0A087WTM6 91 aa5.73□□□□□ -1.49
RPA1-201ENST00000254719 Q6ZRN7 208 aaPredicted RBP5.73□□□□□ -1.49
RPA1-201ENST00000254719 IGLV8-61A0A075B6I0 122 aa5.71□□□□□ -1.49
RPA1-201ENST00000254719 C8orf17Q9NRJ1 99 aa5.71□□□□□ -1.5
RPA1-201ENST00000254719 RYR3Q15413 4870 aa5.71□□□□□ -1.5
RPA1-201ENST00000254719 K7ERS5 55 aa5.71□□□□□ -1.5
RPA1-201ENST00000254719 CYP4F30PQ9H0H9 118 aa5.71□□□□□ -1.5
RPA1-201ENST00000254719 FAT1Q14517 4588 aa5.71□□□□□ -1.5
RPA1-201ENST00000254719 SPRR1BP22528 89 aa5.7□□□□□ -1.5
RPA1-201ENST00000254719 RYR2Q92736 4967 aa5.7□□□□□ -1.5
RPA1-201ENST00000254719 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
RPA1-201ENST00000254719 DYNC1H1Q14204 4646 aaKnown RBP5.7□□□□□ -1.5
RPA1-201ENST00000254719 LINC00313P59037 77 aa5.69□□□□□ -1.5
RPA1-201ENST00000254719 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
RPA1-201ENST00000254719 WWC2-AS2Q96NR7 200 aa5.69□□□□□ -1.5
RPA1-201ENST00000254719 DSCR10P59022 87 aa5.68□□□□□ -1.5
RPA1-201ENST00000254719 CD164Q04900 197 aa5.67□□□□□ -1.5
RPA1-201ENST00000254719 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.51
RPA1-201ENST00000254719 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
RPA1-201ENST00000254719 PSORS1C2Q9UIG4 136 aa5.64□□□□□ -1.51
RPA1-201ENST00000254719 COA5Q86WW8 74 aa5.63□□□□□ -1.51
RPA1-201ENST00000254719 TNXBP22105 4242 aa5.63□□□□□ -1.51
RPA1-201ENST00000254719 SPAG11AQ6PDA7 123 aa5.63□□□□□ -1.51
RPA1-201ENST00000254719 TYMSOSQ8TAI1 123 aa5.62□□□□□ -1.51
RPA1-201ENST00000254719 SPACA4Q8TDM5 124 aa5.62□□□□□ -1.51
RPA1-201ENST00000254719 LCE6AA0A183 80 aa5.6□□□□□ -1.51
RPA1-201ENST00000254719 A0A1B0GU69 56 aa5.6□□□□□ -1.51
RPA1-201ENST00000254719 FLG2Q5D862 2391 aaPredicted RBP5.6□□□□□ -1.51
RPA1-201ENST00000254719 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
RPA1-201ENST00000254719 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
RPA1-201ENST00000254719 Q1T7F1 81 aa5.59□□□□□ -1.51
RPA1-201ENST00000254719 HSPG2P98160 4391 aa5.59□□□□□ -1.51
RPA1-201ENST00000254719 PLAC8Q9NZF1 115 aa5.59□□□□□ -1.52
RPA1-201ENST00000254719 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
RPA1-201ENST00000254719 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
RPA1-201ENST00000254719 LINC00472Q9H8W2 130 aa5.57□□□□□ -1.52
RPA1-201ENST00000254719 IGLV7-46A0A075B6I9 117 aa5.56□□□□□ -1.52
RPA1-201ENST00000254719 Q5VV11 94 aa5.56□□□□□ -1.52
RPA1-201ENST00000254719 PLA2G1BP04054 148 aaKnown RBP5.56□□□□□ -1.52
RPA1-201ENST00000254719 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
RPA1-201ENST00000254719 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.56□□□□□ -1.52
RPA1-201ENST00000254719 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
RPA1-201ENST00000254719 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
RPA1-201ENST00000254719 DMBT1Q9UGM3 2413 aaPredicted RBP5.55□□□□□ -1.52
RPA1-201ENST00000254719 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
RPA1-201ENST00000254719 MMP24-AS1A0A0U1RRL7 71 aa5.54□□□□□ -1.52
RPA1-201ENST00000254719 Q96NJ1 140 aa5.54□□□□□ -1.52
RPA1-201ENST00000254719 LPAP08519 4548 aa5.54□□□□□ -1.52
RPA1-201ENST00000254719 SPINK1P00995 79 aa5.53□□□□□ -1.52
RPA1-201ENST00000254719 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
RPA1-201ENST00000254719 LCA10Q71F78 164 aa5.53□□□□□ -1.52
RPA1-201ENST00000254719 ZCCHC13Q8WW36 166 aaKnown RBP5.52□□□□□ -1.53
RPA1-201ENST00000254719 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
RPA1-201ENST00000254719 RBM12B-AS1Q9P1G2 102 aa5.52□□□□□ -1.53
RPA1-201ENST00000254719 LINC00483Q53H64 154 aa5.51□□□□□ -1.53
RPA1-201ENST00000254719 LINC00304Q8N9R0 145 aa5.51□□□□□ -1.53
RPA1-201ENST00000254719 KRTAP21-3Q3LHN1 58 aa5.51□□□□□ -1.53
RPA1-201ENST00000254719 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
RPA1-201ENST00000254719 Q6ZR54 194 aa5.5□□□□□ -1.53
RPA1-201ENST00000254719 ADM2Q7Z4H4 148 aa5.5□□□□□ -1.53
RPA1-201ENST00000254719 Q8N9P0 234 aaPredicted RBP5.49□□□□□ -1.53
RPA1-201ENST00000254719 UQCR11O14957 56 aa5.49□□□□□ -1.53
RPA1-201ENST00000254719 PRR26Q8N8Z3 221 aa5.48□□□□□ -1.53
RPA1-201ENST00000254719 ANAPC11Q9NYG5 84 aa5.48□□□□□ -1.53
RPA1-201ENST00000254719 ASB16-AS1Q495Z4 193 aa5.47□□□□□ -1.53
RPA1-201ENST00000254719 SPINK7P58062 85 aa5.46□□□□□ -1.54
RPA1-201ENST00000254719 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
RPA1-201ENST00000254719 Q75L30 129 aa5.44□□□□□ -1.54
RPA1-201ENST00000254719 LINC01558Q9Y6Z2 57 aa5.44□□□□□ -1.54
RPA1-201ENST00000254719 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
RPA1-201ENST00000254719 A0A087X002 238 aa5.42□□□□□ -1.54
RPA1-201ENST00000254719 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
RPA1-201ENST00000254719 ABCA13Q86UQ4 5058 aa5.4□□□□□ -1.55
RPA1-201ENST00000254719 MIR22HGQ0VDD5 57 aa5.4□□□□□ -1.55
RPA1-201ENST00000254719 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
RPA1-201ENST00000254719 KRTAP10-2P60368 255 aa5.38□□□□□ -1.55
RPA1-201ENST00000254719 HRES1P13985 223 aa5.38□□□□□ -1.55
RPA1-201ENST00000254719 KRTAP13-3Q3SY46 172 aa5.37□□□□□ -1.55
RPA1-201ENST00000254719 RYR1P21817 5038 aa5.36□□□□□ -1.55
RPA1-201ENST00000254719 Q5W150 140 aa5.34□□□□□ -1.55
RPA1-201ENST00000254719 A6NN06 94 aa5.33□□□□□ -1.56
RPA1-201ENST00000254719 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
RPA1-201ENST00000254719 Q6ZSA8 131 aa5.33□□□□□ -1.56
RPA1-201ENST00000254719 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
RPA1-201ENST00000254719 KRTAP13-2Q52LG2 175 aa5.3□□□□□ -1.56
RPA1-201ENST00000254719 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
RPA1-201ENST00000254719 KRTAP1-4P0C5Y4 121 aa5.29□□□□□ -1.56
RPA1-201ENST00000254719 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
RPA1-201ENST00000254719 KRTAP10-4P60372 401 aaPredicted RBP5.28□□□□□ -1.56
RPA1-201ENST00000254719 KIAA1109Q2LD37 5005 aa5.28□□□□□ -1.56
RPA1-201ENST00000254719 C9orf92A6NGG3 77 aa5.27□□□□□ -1.57
RPA1-201ENST00000254719 KRTAP10-1P60331 282 aa5.27□□□□□ -1.57
RPA1-201ENST00000254719 Q8N1X5 172 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms