RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TRBV7-6A0A0J9YX20 115 aa5.52□□□□□ -1.53
VPS50-201ENST00000251739 ATOX1O00244 68 aa5.52□□□□□ -1.53
VPS50-201ENST00000251739 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
VPS50-201ENST00000251739 Q1RN00 199 aa5.52□□□□□ -1.53
VPS50-201ENST00000251739 ANKRD29Q8N6D5 301 aa5.52□□□□□ -1.53
VPS50-201ENST00000251739 TEX49A0A1B0GTD5 131 aa5.51□□□□□ -1.53
VPS50-201ENST00000251739 ZNF815PA8K554 130 aa5.51□□□□□ -1.53
VPS50-201ENST00000251739 C1orf195Q5TG92 126 aa5.51□□□□□ -1.53
VPS50-201ENST00000251739 COX7CP15954 63 aa5.5□□□□□ -1.53
VPS50-201ENST00000251739 PSMB2P49721 201 aa5.5□□□□□ -1.53
VPS50-201ENST00000251739 FXYD2P54710 66 aa5.5□□□□□ -1.53
VPS50-201ENST00000251739 NAA38Q9BRA0 125 aaKnown RBP5.5□□□□□ -1.53
VPS50-201ENST00000251739 H7C2G1 150 aa5.49□□□□□ -1.53
VPS50-201ENST00000251739 RPL37P61927 97 aaKnown RBP5.49□□□□□ -1.53
VPS50-201ENST00000251739 DEFB105AQ8NG35 78 aa5.48□□□□□ -1.53
VPS50-201ENST00000251739 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
VPS50-201ENST00000251739 H3BT86 120 aa5.47□□□□□ -1.53
VPS50-201ENST00000251739 ATXN8Q156A1 80 aa5.47□□□□□ -1.53
VPS50-201ENST00000251739 LINC00643Q86TS7 51 aa5.47□□□□□ -1.53
VPS50-201ENST00000251739 COX6CP09669 75 aa5.45□□□□□ -1.54
VPS50-201ENST00000251739 MPLKIPQ8TAP9 179 aa5.44□□□□□ -1.54
VPS50-201ENST00000251739 SCGB1D4Q6XE38 83 aa5.43□□□□□ -1.54
VPS50-201ENST00000251739 PCP2Q8IVA1 136 aa5.43□□□□□ -1.54
VPS50-201ENST00000251739 SMIM26A0A096LP01 95 aa5.42□□□□□ -1.54
VPS50-201ENST00000251739 FAM236AA0A1B0GUQ0 79 aa5.42□□□□□ -1.54
VPS50-201ENST00000251739 FAM236BA0A1B0GV22 79 aa5.42□□□□□ -1.54
VPS50-201ENST00000251739 K7ERJ3 54 aa5.42□□□□□ -1.54
VPS50-201ENST00000251739 ATP5EP56381 51 aaPredicted RBP5.42□□□□□ -1.54
VPS50-201ENST00000251739 PRO1854Q9UHT4 67 aa5.42□□□□□ -1.54
VPS50-201ENST00000251739 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
VPS50-201ENST00000251739 MUSTN1Q8IVN3 82 aa5.41□□□□□ -1.54
VPS50-201ENST00000251739 SERP2Q8N6R1 65 aa5.41□□□□□ -1.54
VPS50-201ENST00000251739 SMIM11BQ8TCY0 68 aa5.41□□□□□ -1.54
VPS50-201ENST00000251739 TCL1BO95988 128 aa5.4□□□□□ -1.54
VPS50-201ENST00000251739 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
VPS50-201ENST00000251739 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
VPS50-201ENST00000251739 A0A0B4J2C4 111 aa5.39□□□□□ -1.55
VPS50-201ENST00000251739 M0R2T5 61 aa5.39□□□□□ -1.55
VPS50-201ENST00000251739 Q8N9P0 234 aaPredicted RBP5.39□□□□□ -1.55
VPS50-201ENST00000251739 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
VPS50-201ENST00000251739 USH2AO75445 5202 aa5.37□□□□□ -1.55
VPS50-201ENST00000251739 IGKV2-30P06310 120 aa5.37□□□□□ -1.55
VPS50-201ENST00000251739 C4orf26Q17RF5 130 aa5.37□□□□□ -1.55
VPS50-201ENST00000251739 LINC00575Q6W349 94 aa5.37□□□□□ -1.55
VPS50-201ENST00000251739 CLEC2BQ92478 149 aa5.37□□□□□ -1.55
VPS50-201ENST00000251739 NDUFC1O43677 76 aa5.36□□□□□ -1.55
VPS50-201ENST00000251739 Q6JHZ5 121 aa5.36□□□□□ -1.55
VPS50-201ENST00000251739 IGFL1Q6UW32 110 aa5.36□□□□□ -1.55
VPS50-201ENST00000251739 Q6ZQY7 126 aa5.36□□□□□ -1.55
VPS50-201ENST00000251739 Q75L30 129 aa5.36□□□□□ -1.55
VPS50-201ENST00000251739 F8WEM9 126 aa5.35□□□□□ -1.55
VPS50-201ENST00000251739 CFC1P0CG37 223 aa5.35□□□□□ -1.55
VPS50-201ENST00000251739 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
VPS50-201ENST00000251739 HIST1H4AP62805 103 aaKnown RBP5.34□□□□□ -1.55
VPS50-201ENST00000251739 PMAIP1Q13794 54 aa5.34□□□□□ -1.55
VPS50-201ENST00000251739 OBSCN-AS1Q96MR7 158 aa5.33□□□□□ -1.56
VPS50-201ENST00000251739 FAM236DA0A1B0GTK5 79 aa5.32□□□□□ -1.56
VPS50-201ENST00000251739 hADV29S1A0JD25 119 aa5.32□□□□□ -1.56
VPS50-201ENST00000251739 FAM236CP0DP71 79 aa5.32□□□□□ -1.56
VPS50-201ENST00000251739 ATP5EP2Q5VTU8 51 aa5.32□□□□□ -1.56
VPS50-201ENST00000251739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.3□□□□□ -1.56
VPS50-201ENST00000251739 ATP11AUNQ6ZP68 121 aa5.3□□□□□ -1.56
VPS50-201ENST00000251739 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
VPS50-201ENST00000251739 C20orf166-AS1Q96NR2 134 aa5.28□□□□□ -1.56
VPS50-201ENST00000251739 A8MUU9 505 aa5.27□□□□□ -1.57
VPS50-201ENST00000251739 PRR15Q8IV56 129 aa5.27□□□□□ -1.57
VPS50-201ENST00000251739 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
VPS50-201ENST00000251739 LST1O00453 97 aa5.26□□□□□ -1.57
VPS50-201ENST00000251739 DSCR8Q96T75 97 aa5.26□□□□□ -1.57
VPS50-201ENST00000251739 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
VPS50-201ENST00000251739 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
VPS50-201ENST00000251739 Q96NJ1 140 aa5.25□□□□□ -1.57
VPS50-201ENST00000251739 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
VPS50-201ENST00000251739 DNAL4O96015 105 aa5.22□□□□□ -1.57
VPS50-201ENST00000251739 TRAV7A0A075B6U4 112 aa5.2□□□□□ -1.58
VPS50-201ENST00000251739 A0A087WSZ3 146 aa5.2□□□□□ -1.58
VPS50-201ENST00000251739 KRTAP16-1A8MUX0 517 aa5.2□□□□□ -1.58
VPS50-201ENST00000251739 MT2AP02795 61 aa5.2□□□□□ -1.58
VPS50-201ENST00000251739 FAM218AQ96MZ4 157 aa5.2□□□□□ -1.58
VPS50-201ENST00000251739 NDUFS5O43920 106 aa5.19□□□□□ -1.58
VPS50-201ENST00000251739 KLKP1Q107X0 134 aa5.19□□□□□ -1.58
VPS50-201ENST00000251739 RBM3P98179 157 aaKnown RBP5.18□□□□□ -1.58
VPS50-201ENST00000251739 H0YGX0 51 aa5.17□□□□□ -1.58
VPS50-201ENST00000251739 DSCR10P59022 87 aa5.17□□□□□ -1.58
VPS50-201ENST00000251739 A0A1W2PNM2 257 aa5.16□□□□□ -1.58
VPS50-201ENST00000251739 MT1FP04733 61 aa5.16□□□□□ -1.58
VPS50-201ENST00000251739 CCKP06307 115 aa5.16□□□□□ -1.58
VPS50-201ENST00000251739 HRES1P13985 223 aa5.15□□□□□ -1.59
VPS50-201ENST00000251739 BAALC-AS2P0C853 105 aa5.14□□□□□ -1.59
VPS50-201ENST00000251739 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
VPS50-201ENST00000251739 H3BQ85 93 aa5.12□□□□□ -1.59
VPS50-201ENST00000251739 H7BZZ5 65 aa5.12□□□□□ -1.59
VPS50-201ENST00000251739 C20orf197Q8N268 126 aa5.12□□□□□ -1.59
VPS50-201ENST00000251739 IGKV2D-30A0A075B6S6 120 aa5.11□□□□□ -1.59
VPS50-201ENST00000251739 LINC00313P59037 77 aa5.11□□□□□ -1.59
VPS50-201ENST00000251739 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
VPS50-201ENST00000251739 UBL5Q9BZL1 73 aa5.11□□□□□ -1.59
VPS50-201ENST00000251739 TRBV7-4A0A0J9YYF1 115 aa5.1□□□□□ -1.59
VPS50-201ENST00000251739 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
VPS50-201ENST00000251739 LINC00472Q9H8W2 130 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms