RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 TGP01266 2768 aa11.02□□□□□ -0.65
PTPN12-201ENST00000248594 SPINK1P00995 79 aa11.01□□□□□ -0.65
PTPN12-201ENST00000248594 KRTAP24-1Q3LI83 254 aa11.01□□□□□ -0.65
PTPN12-201ENST00000248594 Q96NJ1 140 aa10.98□□□□□ -0.65
PTPN12-201ENST00000248594 UBE2DNLQ8IWF7 75 aa10.96□□□□□ -0.66
PTPN12-201ENST00000248594 KRTAP1-5Q9BYS1 174 aa10.96□□□□□ -0.66
PTPN12-201ENST00000248594 UQCR11O14957 56 aa10.96□□□□□ -0.66
PTPN12-201ENST00000248594 RTL8CO15255 209 aa10.94□□□□□ -0.66
PTPN12-201ENST00000248594 C1orf134Q5TEV5 83 aa10.92□□□□□ -0.66
PTPN12-201ENST00000248594 PANO1I0J062 215 aa10.89□□□□□ -0.67
PTPN12-201ENST00000248594 SPRR1BP22528 89 aa10.89□□□□□ -0.67
PTPN12-201ENST00000248594 CIRBP-AS1Q8TBR5 109 aa10.88□□□□□ -0.67
PTPN12-201ENST00000248594 CRIPTQ9P021 101 aa10.88□□□□□ -0.67
PTPN12-201ENST00000248594 IGKV2D-30A0A075B6S6 120 aa10.86□□□□□ -0.67
PTPN12-201ENST00000248594 IGKV2-30P06310 120 aa10.86□□□□□ -0.67
PTPN12-201ENST00000248594 SPATA8Q6RVD6 105 aa10.86□□□□□ -0.67
PTPN12-201ENST00000248594 DMBT1Q9UGM3 2413 aaPredicted RBP10.86□□□□□ -0.67
PTPN12-201ENST00000248594 DNAH9Q9NYC9 4486 aa10.84□□□□□ -0.67
PTPN12-201ENST00000248594 FBN3Q75N90 2809 aa10.83□□□□□ -0.68
PTPN12-201ENST00000248594 ASB16-AS1Q495Z4 193 aa10.82□□□□□ -0.68
PTPN12-201ENST00000248594 DNAH7Q8WXX0 4024 aa10.79□□□□□ -0.68
PTPN12-201ENST00000248594 CMYA5Q8N3K9 4069 aa10.78□□□□□ -0.68
PTPN12-201ENST00000248594 DMAC1Q96GE9 116 aa10.75□□□□□ -0.69
PTPN12-201ENST00000248594 HUWE1Q7Z6Z7 4374 aaKnown RBP10.73□□□□□ -0.69
PTPN12-201ENST00000248594 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.71□□□□□ -0.69
PTPN12-201ENST00000248594 FRAS1Q86XX4 4008 aa10.69□□□□□ -0.7
PTPN12-201ENST00000248594 ZNF861PO60384 105 aa10.69□□□□□ -0.7
PTPN12-201ENST00000248594 C14orf177Q52M58 125 aa10.68□□□□□ -0.7
PTPN12-201ENST00000248594 WWC2-AS2Q96NR7 200 aa10.68□□□□□ -0.7
PTPN12-201ENST00000248594 Q8N1X5 172 aa10.66□□□□□ -0.7
PTPN12-201ENST00000248594 PSORS1C2Q9UIG4 136 aa10.63□□□□□ -0.71
PTPN12-201ENST00000248594 KRTAP13-1Q8IUC0 172 aa10.61□□□□□ -0.71
PTPN12-201ENST00000248594 DNAH3Q8TD57 4116 aa10.6□□□□□ -0.71
PTPN12-201ENST00000248594 FAM229AH3BQW9 127 aa10.6□□□□□ -0.71
PTPN12-201ENST00000248594 KRTAP13-3Q3SY46 172 aa10.59□□□□□ -0.71
PTPN12-201ENST00000248594 MEGF8Q7Z7M0 2845 aa10.59□□□□□ -0.71
PTPN12-201ENST00000248594 A0A0A0MQY5 61 aa10.58□□□□□ -0.72
PTPN12-201ENST00000248594 ROMO1P60602 79 aa10.58□□□□□ -0.72
PTPN12-201ENST00000248594 PLECQ15149 4684 aaKnown RBP10.58□□□□□ -0.72
PTPN12-201ENST00000248594 SSBP3-AS1Q7Z2R9 100 aa10.56□□□□□ -0.72
PTPN12-201ENST00000248594 IGLV7-43P04211 117 aa10.52□□□□□ -0.72
PTPN12-201ENST00000248594 DNAH1Q9P2D7 4330 aa10.52□□□□□ -0.73
PTPN12-201ENST00000248594 KRTAP25-1Q3LHN0 102 aa10.52□□□□□ -0.73
PTPN12-201ENST00000248594 LINC00483Q53H64 154 aa10.47□□□□□ -0.73
PTPN12-201ENST00000248594 SPACA4Q8TDM5 124 aa10.47□□□□□ -0.73
PTPN12-201ENST00000248594 ALMS1Q8TCU4 4167 aa10.45□□□□□ -0.74
PTPN12-201ENST00000248594 KRTAP21-3Q3LHN1 58 aa10.45□□□□□ -0.74
PTPN12-201ENST00000248594 LINC00304Q8N9R0 145 aa10.45□□□□□ -0.74
PTPN12-201ENST00000248594 DNHD1Q96M86 4753 aa10.45□□□□□ -0.74
PTPN12-201ENST00000248594 KMT2AQ03164 3969 aa10.44□□□□□ -0.74
PTPN12-201ENST00000248594 A8MUU9 505 aa10.43□□□□□ -0.74
PTPN12-201ENST00000248594 IGLV5-52A0A0A0MRZ9 124 aa10.43□□□□□ -0.74
PTPN12-201ENST00000248594 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
PTPN12-201ENST00000248594 NBDYA0A0U1RRE5 68 aa10.41□□□□□ -0.74
PTPN12-201ENST00000248594 H0YAA0 97 aa10.4□□□□□ -0.75
PTPN12-201ENST00000248594 SPINT4Q6UDR6 99 aa10.39□□□□□ -0.75
PTPN12-201ENST00000248594 Q6ZSA8 131 aa10.38□□□□□ -0.75
PTPN12-201ENST00000248594 TYMSOSQ8TAI1 123 aa10.38□□□□□ -0.75
PTPN12-201ENST00000248594 STARD9Q9P2P6 4700 aa10.35□□□□□ -0.75
PTPN12-201ENST00000248594 P0C880 135 aa10.33□□□□□ -0.76
PTPN12-201ENST00000248594 A0A1B0GU33 70 aa10.33□□□□□ -0.76
PTPN12-201ENST00000248594 DNAH8Q96JB1 4490 aa10.32□□□□□ -0.76
PTPN12-201ENST00000248594 LY6G6CO95867 125 aa10.3□□□□□ -0.76
PTPN12-201ENST00000248594 K7ERS5 55 aa10.27□□□□□ -0.76
PTPN12-201ENST00000248594 A0A087WTM6 91 aa10.26□□□□□ -0.77
PTPN12-201ENST00000248594 DNAH17Q9UFH2 4485 aa10.25□□□□□ -0.77
PTPN12-201ENST00000248594 DNAH6Q9C0G6 4158 aa10.23□□□□□ -0.77
PTPN12-201ENST00000248594 PRKDCP78527 4128 aaKnown RBP10.23□□□□□ -0.77
PTPN12-201ENST00000248594 KRTAP16-1A8MUX0 517 aa10.21□□□□□ -0.78
PTPN12-201ENST00000248594 Q6ZRN7 208 aaPredicted RBP10.21□□□□□ -0.78
PTPN12-201ENST00000248594 DNAH11Q96DT5 4516 aa10.2□□□□□ -0.78
PTPN12-201ENST00000248594 A0A0D9SG42 100 aa10.2□□□□□ -0.78
PTPN12-201ENST00000248594 NDUFAF8A1L188 74 aa10.19□□□□□ -0.78
PTPN12-201ENST00000248594 DNAH2Q9P225 4427 aa10.16□□□□□ -0.78
PTPN12-201ENST00000248594 H1FX-AS1Q4G0G2 97 aa10.14□□□□□ -0.79
PTPN12-201ENST00000248594 HECTD4Q9Y4D8 3996 aa10.13□□□□□ -0.79
PTPN12-201ENST00000248594 VPS13DQ5THJ4 4388 aa10.12□□□□□ -0.79
PTPN12-201ENST00000248594 C10orf95Q9H7T3 257 aa10.11□□□□□ -0.79
PTPN12-201ENST00000248594 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
PTPN12-201ENST00000248594 C9orf92A6NGG3 77 aa10.1□□□□□ -0.79
PTPN12-201ENST00000248594 KRTAP10-2P60368 255 aa10.08□□□□□ -0.8
PTPN12-201ENST00000248594 NUPR2A6NF83 97 aa10.07□□□□□ -0.8
PTPN12-201ENST00000248594 LRP1BQ9NZR2 4599 aa10.03□□□□□ -0.8
PTPN12-201ENST00000248594 DYNC2H1Q8NCM8 4307 aaKnown RBP9.99□□□□□ -0.81
PTPN12-201ENST00000248594 COX6B2Q6YFQ2 88 aa9.98□□□□□ -0.81
PTPN12-201ENST00000248594 C20orf166-AS1Q96NR2 134 aa9.95□□□□□ -0.82
PTPN12-201ENST00000248594 SMR3BP02814 79 aaPredicted RBP9.92□□□□□ -0.82
PTPN12-201ENST00000248594 TPRXLQ17RH7 258 aa9.92□□□□□ -0.82
PTPN12-201ENST00000248594 KRTAP3-1Q9BYR8 98 aa9.86□□□□□ -0.83
PTPN12-201ENST00000248594 KRTAP10-1P60331 282 aa9.85□□□□□ -0.83
PTPN12-201ENST00000248594 FAT2Q9NYQ8 4349 aa9.85□□□□□ -0.83
PTPN12-201ENST00000248594 HYDINQ4G0P3 5121 aa9.85□□□□□ -0.83
PTPN12-201ENST00000248594 RPL37P61927 97 aaKnown RBP9.84□□□□□ -0.83
PTPN12-201ENST00000248594 DNAH5Q8TE73 4624 aa9.82□□□□□ -0.84
PTPN12-201ENST00000248594 VPS13BQ7Z7G8 4022 aa9.81□□□□□ -0.84
PTPN12-201ENST00000248594 FAT1Q14517 4588 aa9.76□□□□□ -0.85
PTPN12-201ENST00000248594 PKHD1P08F94 4074 aa9.74□□□□□ -0.85
PTPN12-201ENST00000248594 LUZP6Q538Z0 58 aa9.72□□□□□ -0.85
PTPN12-201ENST00000248594 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
PTPN12-201ENST00000248594 KRTAP13-4Q3LI77 160 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 263.3 ms