RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
SOX9-201ENST00000245479 RTL8CO15255 209 aa7.11□□□□□ -1.27
SOX9-201ENST00000245479 HRES1P13985 223 aa7.11□□□□□ -1.27
SOX9-201ENST00000245479 LINC01554Q52M75 96 aa7.1□□□□□ -1.27
SOX9-201ENST00000245479 DNAH10Q8IVF4 4471 aa7.1□□□□□ -1.27
SOX9-201ENST00000245479 NUPR2A6NF83 97 aa7.1□□□□□ -1.27
SOX9-201ENST00000245479 C9orf163Q8N9P6 203 aa7.09□□□□□ -1.27
SOX9-201ENST00000245479 LYSTQ99698 3801 aa7.09□□□□□ -1.27
SOX9-201ENST00000245479 LINC00472Q9H8W2 130 aa7.09□□□□□ -1.27
SOX9-201ENST00000245479 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
SOX9-201ENST00000245479 KRTAP29-1A8MX34 341 aaPredicted RBP7.08□□□□□ -1.28
SOX9-201ENST00000245479 C1orf134Q5TEV5 83 aa7.07□□□□□ -1.28
SOX9-201ENST00000245479 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
SOX9-201ENST00000245479 PSORS1C2Q9UIG4 136 aa7.06□□□□□ -1.28
SOX9-201ENST00000245479 MEGF8Q7Z7M0 2845 aa7.05□□□□□ -1.28
SOX9-201ENST00000245479 A6NN06 94 aa7.05□□□□□ -1.28
SOX9-201ENST00000245479 A0A087WTM6 91 aa7.04□□□□□ -1.28
SOX9-201ENST00000245479 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
SOX9-201ENST00000245479 SPACA4Q8TDM5 124 aa7.02□□□□□ -1.29
SOX9-201ENST00000245479 SMR3BP02814 79 aaPredicted RBP7.01□□□□□ -1.29
SOX9-201ENST00000245479 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
SOX9-201ENST00000245479 SPRR1BP22528 89 aa6.96□□□□□ -1.3
SOX9-201ENST00000245479 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
SOX9-201ENST00000245479 ZNF861PO60384 105 aa6.95□□□□□ -1.3
SOX9-201ENST00000245479 SSBP3-AS1Q7Z2R9 100 aa6.94□□□□□ -1.3
SOX9-201ENST00000245479 A0A087X002 238 aa6.93□□□□□ -1.3
SOX9-201ENST00000245479 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
SOX9-201ENST00000245479 ADM2Q7Z4H4 148 aa6.93□□□□□ -1.3
SOX9-201ENST00000245479 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
SOX9-201ENST00000245479 Q6ZR54 194 aa6.91□□□□□ -1.3
SOX9-201ENST00000245479 Q96NJ1 140 aa6.9□□□□□ -1.3
SOX9-201ENST00000245479 SPINT4Q6UDR6 99 aa6.89□□□□□ -1.31
SOX9-201ENST00000245479 Q8N1X5 172 aa6.88□□□□□ -1.31
SOX9-201ENST00000245479 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
SOX9-201ENST00000245479 Q5W150 140 aa6.85□□□□□ -1.31
SOX9-201ENST00000245479 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
SOX9-201ENST00000245479 IGLV7-43P04211 117 aa6.83□□□□□ -1.32
SOX9-201ENST00000245479 DNHD1Q96M86 4753 aa6.83□□□□□ -1.32
SOX9-201ENST00000245479 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
SOX9-201ENST00000245479 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
SOX9-201ENST00000245479 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
SOX9-201ENST00000245479 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
SOX9-201ENST00000245479 DNAH9Q9NYC9 4486 aa6.8□□□□□ -1.32
SOX9-201ENST00000245479 WWC2-AS2Q96NR7 200 aa6.8□□□□□ -1.32
SOX9-201ENST00000245479 SPATA8Q6RVD6 105 aa6.79□□□□□ -1.32
SOX9-201ENST00000245479 TYMSOSQ8TAI1 123 aa6.78□□□□□ -1.32
SOX9-201ENST00000245479 DNAH7Q8WXX0 4024 aa6.77□□□□□ -1.33
SOX9-201ENST00000245479 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
SOX9-201ENST00000245479 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
SOX9-201ENST00000245479 A0A1B0GU33 70 aa6.74□□□□□ -1.33
SOX9-201ENST00000245479 PRKDCP78527 4128 aaKnown RBP6.73□□□□□ -1.33
SOX9-201ENST00000245479 KMT2AQ03164 3969 aa6.73□□□□□ -1.33
SOX9-201ENST00000245479 STARD9Q9P2P6 4700 aa6.71□□□□□ -1.34
SOX9-201ENST00000245479 PLAC8Q9NZF1 115 aa6.7□□□□□ -1.34
SOX9-201ENST00000245479 CMYA5Q8N3K9 4069 aa6.69□□□□□ -1.34
SOX9-201ENST00000245479 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
SOX9-201ENST00000245479 A0A0D9SG42 100 aa6.68□□□□□ -1.34
SOX9-201ENST00000245479 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
SOX9-201ENST00000245479 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
SOX9-201ENST00000245479 FRAS1Q86XX4 4008 aa6.66□□□□□ -1.34
SOX9-201ENST00000245479 DNAH1Q9P2D7 4330 aa6.61□□□□□ -1.35
SOX9-201ENST00000245479 LINC00304Q8N9R0 145 aa6.6□□□□□ -1.35
SOX9-201ENST00000245479 KRTAP13-2Q52LG2 175 aa6.59□□□□□ -1.35
SOX9-201ENST00000245479 DNAH8Q96JB1 4490 aa6.58□□□□□ -1.36
SOX9-201ENST00000245479 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
SOX9-201ENST00000245479 ROMO1P60602 79 aa6.52□□□□□ -1.37
SOX9-201ENST00000245479 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
SOX9-201ENST00000245479 DNAH6Q9C0G6 4158 aa6.5□□□□□ -1.37
SOX9-201ENST00000245479 VPS13DQ5THJ4 4388 aa6.49□□□□□ -1.37
SOX9-201ENST00000245479 FAT1Q14517 4588 aa6.49□□□□□ -1.37
SOX9-201ENST00000245479 LRP1BQ9NZR2 4599 aa6.48□□□□□ -1.37
SOX9-201ENST00000245479 DNAH17Q9UFH2 4485 aa6.47□□□□□ -1.37
SOX9-201ENST00000245479 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
SOX9-201ENST00000245479 DNAH2Q9P225 4427 aa6.45□□□□□ -1.38
SOX9-201ENST00000245479 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
SOX9-201ENST00000245479 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
SOX9-201ENST00000245479 A8MUU9 505 aa6.42□□□□□ -1.38
SOX9-201ENST00000245479 KRTAP21-3Q3LHN1 58 aa6.42□□□□□ -1.38
SOX9-201ENST00000245479 HYDINQ4G0P3 5121 aa6.41□□□□□ -1.38
SOX9-201ENST00000245479 NDUFAF8A1L188 74 aa6.41□□□□□ -1.38
SOX9-201ENST00000245479 Q6ZSA8 131 aa6.41□□□□□ -1.38
SOX9-201ENST00000245479 KRTAP1-4P0C5Y4 121 aa6.38□□□□□ -1.39
SOX9-201ENST00000245479 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
SOX9-201ENST00000245479 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
SOX9-201ENST00000245479 KRTAP13-3Q3SY46 172 aa6.36□□□□□ -1.39
SOX9-201ENST00000245479 H0YAA0 97 aa6.35□□□□□ -1.39
SOX9-201ENST00000245479 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
SOX9-201ENST00000245479 HECTD4Q9Y4D8 3996 aa6.32□□□□□ -1.4
SOX9-201ENST00000245479 COX6B2Q6YFQ2 88 aa6.31□□□□□ -1.4
SOX9-201ENST00000245479 PKHD1P08F94 4074 aa6.31□□□□□ -1.4
SOX9-201ENST00000245479 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
SOX9-201ENST00000245479 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
SOX9-201ENST00000245479 Q5VSD8 79 aa6.25□□□□□ -1.41
SOX9-201ENST00000245479 S4R3F8 94 aa6.25□□□□□ -1.41
SOX9-201ENST00000245479 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
SOX9-201ENST00000245479 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
SOX9-201ENST00000245479 DYNC2H1Q8NCM8 4307 aaKnown RBP6.19□□□□□ -1.42
SOX9-201ENST00000245479 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
SOX9-201ENST00000245479 DYNC1H1Q14204 4646 aaKnown RBP6.19□□□□□ -1.42
SOX9-201ENST00000245479 FAT2Q9NYQ8 4349 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms