RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
USP11-201ENST00000218348 IGKV4-1P06312 121 aa6.15□□□□□ -1.42
USP11-201ENST00000218348 Q8NBF4 154 aa6.15□□□□□ -1.43
USP11-201ENST00000218348 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.43
USP11-201ENST00000218348 TNP2Q05952 138 aa6.14□□□□□ -1.43
USP11-201ENST00000218348 C1orf134Q5TEV5 83 aa6.14□□□□□ -1.43
USP11-201ENST00000218348 LIMD2Q9BT23 127 aa6.14□□□□□ -1.43
USP11-201ENST00000218348 IGLV5-52A0A0A0MRZ9 124 aa6.14□□□□□ -1.43
USP11-201ENST00000218348 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
USP11-201ENST00000218348 RETNLBQ9BQ08 111 aa6.13□□□□□ -1.43
USP11-201ENST00000218348 SPACA4Q8TDM5 124 aa6.11□□□□□ -1.43
USP11-201ENST00000218348 K7EQZ3 153 aa6.1□□□□□ -1.43
USP11-201ENST00000218348 SPINK7P58062 85 aa6.1□□□□□ -1.43
USP11-201ENST00000218348 Q75L30 129 aa6.1□□□□□ -1.43
USP11-201ENST00000218348 PSORS1C2Q9UIG4 136 aa6.1□□□□□ -1.43
USP11-201ENST00000218348 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
USP11-201ENST00000218348 WFDC13Q8IUB5 93 aa6.09□□□□□ -1.43
USP11-201ENST00000218348 LINC00208Q96KT6 92 aa6.09□□□□□ -1.43
USP11-201ENST00000218348 KRTAP10-2P60368 255 aa6.09□□□□□ -1.44
USP11-201ENST00000218348 CYP4F30PQ9H0H9 118 aa6.09□□□□□ -1.44
USP11-201ENST00000218348 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
USP11-201ENST00000218348 DSCR10P59022 87 aa6.07□□□□□ -1.44
USP11-201ENST00000218348 HSPG2P98160 4391 aa6.07□□□□□ -1.44
USP11-201ENST00000218348 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
USP11-201ENST00000218348 RYR1P21817 5038 aa6.06□□□□□ -1.44
USP11-201ENST00000218348 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
USP11-201ENST00000218348 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
USP11-201ENST00000218348 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
USP11-201ENST00000218348 CASC2Q6XLA1 102 aa6.05□□□□□ -1.44
USP11-201ENST00000218348 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
USP11-201ENST00000218348 H0Y9J4 135 aa6.04□□□□□ -1.44
USP11-201ENST00000218348 BIRC6Q9NR09 4857 aa6.02□□□□□ -1.45
USP11-201ENST00000218348 CSAG1Q6PB30 78 aa6.02□□□□□ -1.45
USP11-201ENST00000218348 KRTAP13-1Q8IUC0 172 aa6.01□□□□□ -1.45
USP11-201ENST00000218348 CIRBP-AS1Q8TBR5 109 aa6.01□□□□□ -1.45
USP11-201ENST00000218348 SPINK6Q6UWN8 80 aa5.99□□□□□ -1.45
USP11-201ENST00000218348 PLAC8Q9NZF1 115 aa5.99□□□□□ -1.45
USP11-201ENST00000218348 ZNF861PO60384 105 aa5.98□□□□□ -1.45
USP11-201ENST00000218348 KRTAP10-1P60331 282 aa5.97□□□□□ -1.45
USP11-201ENST00000218348 COA5Q86WW8 74 aa5.97□□□□□ -1.45
USP11-201ENST00000218348 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
USP11-201ENST00000218348 IGLV8-61A0A075B6I0 122 aa5.97□□□□□ -1.45
USP11-201ENST00000218348 SPRR1BP22528 89 aa5.97□□□□□ -1.45
USP11-201ENST00000218348 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
USP11-201ENST00000218348 NDUFB1O75438 58 aa5.96□□□□□ -1.46
USP11-201ENST00000218348 HERC2O95714 4834 aa5.95□□□□□ -1.46
USP11-201ENST00000218348 IGLV7-43P04211 117 aa5.94□□□□□ -1.46
USP11-201ENST00000218348 Q6ZSA8 131 aa5.94□□□□□ -1.46
USP11-201ENST00000218348 A0A1B0GW54 56 aa5.94□□□□□ -1.46
USP11-201ENST00000218348 FAT1Q14517 4588 aa5.93□□□□□ -1.46
USP11-201ENST00000218348 IGHV6-1A0A0B4J1U7 121 aa5.93□□□□□ -1.46
USP11-201ENST00000218348 LINC00472Q9H8W2 130 aa5.93□□□□□ -1.46
USP11-201ENST00000218348 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
USP11-201ENST00000218348 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
USP11-201ENST00000218348 A8MWP4 228 aa5.9□□□□□ -1.47
USP11-201ENST00000218348 A0A087X002 238 aa5.89□□□□□ -1.47
USP11-201ENST00000218348 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
USP11-201ENST00000218348 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
USP11-201ENST00000218348 CDK2AP2O75956 126 aa5.88□□□□□ -1.47
USP11-201ENST00000218348 LINC00483Q53H64 154 aa5.88□□□□□ -1.47
USP11-201ENST00000218348 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
USP11-201ENST00000218348 Q96NJ1 140 aa5.86□□□□□ -1.47
USP11-201ENST00000218348 H0Y9P7 68 aa5.86□□□□□ -1.47
USP11-201ENST00000218348 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
USP11-201ENST00000218348 ROMO1P60602 79 aa5.85□□□□□ -1.47
USP11-201ENST00000218348 MMP24-AS1A0A0U1RRL7 71 aa5.84□□□□□ -1.47
USP11-201ENST00000218348 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
USP11-201ENST00000218348 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
USP11-201ENST00000218348 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
USP11-201ENST00000218348 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
USP11-201ENST00000218348 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
USP11-201ENST00000218348 KRTAP13-2Q52LG2 175 aa5.81□□□□□ -1.48
USP11-201ENST00000218348 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
USP11-201ENST00000218348 FLG2Q5D862 2391 aaPredicted RBP5.8□□□□□ -1.48
USP11-201ENST00000218348 TNXBP22105 4242 aa5.8□□□□□ -1.48
USP11-201ENST00000218348 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
USP11-201ENST00000218348 PCLOQ9Y6V0 5065 aa5.79□□□□□ -1.48
USP11-201ENST00000218348 P0C880 135 aa5.78□□□□□ -1.48
USP11-201ENST00000218348 MYCBP2O75592 4640 aa5.76□□□□□ -1.49
USP11-201ENST00000218348 SSBP3-AS1Q7Z2R9 100 aa5.74□□□□□ -1.49
USP11-201ENST00000218348 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
USP11-201ENST00000218348 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
USP11-201ENST00000218348 KRTAP1-4P0C5Y4 121 aa5.74□□□□□ -1.49
USP11-201ENST00000218348 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
USP11-201ENST00000218348 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
USP11-201ENST00000218348 HRES1P13985 223 aa5.73□□□□□ -1.49
USP11-201ENST00000218348 Q5W150 140 aa5.71□□□□□ -1.49
USP11-201ENST00000218348 CRIPTQ9P021 101 aa5.71□□□□□ -1.5
USP11-201ENST00000218348 DMBT1Q9UGM3 2413 aaPredicted RBP5.7□□□□□ -1.5
USP11-201ENST00000218348 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
USP11-201ENST00000218348 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
USP11-201ENST00000218348 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
USP11-201ENST00000218348 KRTAP16-1A8MUX0 517 aa5.66□□□□□ -1.5
USP11-201ENST00000218348 TP53AIP1Q9HCN2 124 aa5.65□□□□□ -1.51
USP11-201ENST00000218348 A0A1B0GU69 56 aa5.63□□□□□ -1.51
USP11-201ENST00000218348 C9orf92A6NGG3 77 aa5.63□□□□□ -1.51
USP11-201ENST00000218348 H3BPC8 53 aa5.63□□□□□ -1.51
USP11-201ENST00000218348 Q8N1X5 172 aa5.63□□□□□ -1.51
USP11-201ENST00000218348 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
USP11-201ENST00000218348 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms