RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 K7EQZ3 153 aa5.49□□□□□ -1.53
MTHFD1-201ENST00000216605 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
MTHFD1-201ENST00000216605 DYNC2H1Q8NCM8 4307 aaKnown RBP5.48□□□□□ -1.53
MTHFD1-201ENST00000216605 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
MTHFD1-201ENST00000216605 KRTAP10-2P60368 255 aa5.46□□□□□ -1.53
MTHFD1-201ENST00000216605 LINC01558Q9Y6Z2 57 aa5.46□□□□□ -1.54
MTHFD1-201ENST00000216605 IGFL1Q6UW32 110 aa5.45□□□□□ -1.54
MTHFD1-201ENST00000216605 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
MTHFD1-201ENST00000216605 VPS13DQ5THJ4 4388 aa5.45□□□□□ -1.54
MTHFD1-201ENST00000216605 A0A087WSZ3 146 aa5.44□□□□□ -1.54
MTHFD1-201ENST00000216605 PLAC8Q9NZF1 115 aa5.44□□□□□ -1.54
MTHFD1-201ENST00000216605 SRRM2Q9UQ35 2752 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-201ENST00000216605 SPINK7P58062 85 aa5.44□□□□□ -1.54
MTHFD1-201ENST00000216605 DEFB116Q30KQ4 102 aa5.43□□□□□ -1.54
MTHFD1-201ENST00000216605 WFDC13Q8IUB5 93 aa5.43□□□□□ -1.54
MTHFD1-201ENST00000216605 ANAPC11Q9NYG5 84 aa5.43□□□□□ -1.54
MTHFD1-201ENST00000216605 COA5Q86WW8 74 aa5.42□□□□□ -1.54
MTHFD1-201ENST00000216605 CIRBP-AS1Q8TBR5 109 aa5.42□□□□□ -1.54
MTHFD1-201ENST00000216605 H3BPC8 53 aa5.41□□□□□ -1.54
MTHFD1-201ENST00000216605 ZNF861PO60384 105 aa5.41□□□□□ -1.54
MTHFD1-201ENST00000216605 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
MTHFD1-201ENST00000216605 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
MTHFD1-201ENST00000216605 KRTAP10-1P60331 282 aa5.39□□□□□ -1.55
MTHFD1-201ENST00000216605 KRTAP13-1Q8IUC0 172 aa5.39□□□□□ -1.55
MTHFD1-201ENST00000216605 SPRR1BP22528 89 aa5.39□□□□□ -1.55
MTHFD1-201ENST00000216605 H0Y9P7 68 aa5.38□□□□□ -1.55
MTHFD1-201ENST00000216605 IGLV7-43P04211 117 aa5.38□□□□□ -1.55
MTHFD1-201ENST00000216605 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
MTHFD1-201ENST00000216605 ROMO1P60602 79 aa5.37□□□□□ -1.55
MTHFD1-201ENST00000216605 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
MTHFD1-201ENST00000216605 KRTAP29-1A8MX34 341 aaPredicted RBP5.37□□□□□ -1.55
MTHFD1-201ENST00000216605 RPL37AP61513 92 aaKnown RBP5.36□□□□□ -1.55
MTHFD1-201ENST00000216605 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
MTHFD1-201ENST00000216605 DNAH2Q9P225 4427 aa5.34□□□□□ -1.55
MTHFD1-201ENST00000216605 A8MWP4 228 aa5.33□□□□□ -1.56
MTHFD1-201ENST00000216605 HYDINQ4G0P3 5121 aa5.31□□□□□ -1.56
MTHFD1-201ENST00000216605 HECTD4Q9Y4D8 3996 aa5.31□□□□□ -1.56
MTHFD1-201ENST00000216605 LINC00483Q53H64 154 aa5.31□□□□□ -1.56
MTHFD1-201ENST00000216605 SPINK6Q6UWN8 80 aa5.3□□□□□ -1.56
MTHFD1-201ENST00000216605 LINC00472Q9H8W2 130 aa5.3□□□□□ -1.56
MTHFD1-201ENST00000216605 IGLV7-46A0A075B6I9 117 aa5.3□□□□□ -1.56
MTHFD1-201ENST00000216605 SMR3BP02814 79 aaPredicted RBP5.3□□□□□ -1.56
MTHFD1-201ENST00000216605 Q6ZSA8 131 aa5.29□□□□□ -1.56
MTHFD1-201ENST00000216605 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
MTHFD1-201ENST00000216605 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
MTHFD1-201ENST00000216605 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
MTHFD1-201ENST00000216605 ALMS1Q8TCU4 4167 aa5.26□□□□□ -1.57
MTHFD1-201ENST00000216605 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
MTHFD1-201ENST00000216605 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
MTHFD1-201ENST00000216605 DNAH6Q9C0G6 4158 aa5.25□□□□□ -1.57
MTHFD1-201ENST00000216605 DNAH11Q96DT5 4516 aa5.25□□□□□ -1.57
MTHFD1-201ENST00000216605 PCOTHQ58A44 107 aa5.24□□□□□ -1.57
MTHFD1-201ENST00000216605 SSBP3-AS1Q7Z2R9 100 aa5.24□□□□□ -1.57
MTHFD1-201ENST00000216605 C8orf17Q9NRJ1 99 aa5.23□□□□□ -1.57
MTHFD1-201ENST00000216605 FRAS1Q86XX4 4008 aa5.23□□□□□ -1.57
MTHFD1-201ENST00000216605 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
MTHFD1-201ENST00000216605 DNAH8Q96JB1 4490 aa5.21□□□□□ -1.58
MTHFD1-201ENST00000216605 TYMSOSQ8TAI1 123 aa5.21□□□□□ -1.58
MTHFD1-201ENST00000216605 DNAH5Q8TE73 4624 aa5.2□□□□□ -1.58
MTHFD1-201ENST00000216605 P0C880 135 aa5.19□□□□□ -1.58
MTHFD1-201ENST00000216605 KRTAP13-2Q52LG2 175 aa5.19□□□□□ -1.58
MTHFD1-201ENST00000216605 Q96NJ1 140 aa5.18□□□□□ -1.58
MTHFD1-201ENST00000216605 A0A1B0GVX0 72 aa5.18□□□□□ -1.58
MTHFD1-201ENST00000216605 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
MTHFD1-201ENST00000216605 HRES1P13985 223 aa5.16□□□□□ -1.58
MTHFD1-201ENST00000216605 A0A1B0GVY2 172 aa5.16□□□□□ -1.58
MTHFD1-201ENST00000216605 SACSQ9NZJ4 4579 aa5.16□□□□□ -1.58
MTHFD1-201ENST00000216605 FAT2Q9NYQ8 4349 aa5.15□□□□□ -1.58
MTHFD1-201ENST00000216605 KRTAP1-4P0C5Y4 121 aa5.15□□□□□ -1.59
MTHFD1-201ENST00000216605 MRPL34Q9BQ48 92 aaKnown RBP5.15□□□□□ -1.59
MTHFD1-201ENST00000216605 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
MTHFD1-201ENST00000216605 PKD1P98161 4303 aa5.14□□□□□ -1.59
MTHFD1-201ENST00000216605 UQCR11O14957 56 aa5.13□□□□□ -1.59
MTHFD1-201ENST00000216605 A0A1B0GU69 56 aa5.12□□□□□ -1.59
MTHFD1-201ENST00000216605 PKHD1P08F94 4074 aa5.12□□□□□ -1.59
MTHFD1-201ENST00000216605 LINC00304Q8N9R0 145 aa5.11□□□□□ -1.59
MTHFD1-201ENST00000216605 SPINK1P00995 79 aa5.09□□□□□ -1.59
MTHFD1-201ENST00000216605 ACYP2P14621 99 aa5.09□□□□□ -1.59
MTHFD1-201ENST00000216605 VPS13BQ7Z7G8 4022 aa5.09□□□□□ -1.6
MTHFD1-201ENST00000216605 KMT2CQ8NEZ4 4911 aaKnown RBP5.08□□□□□ -1.6
MTHFD1-201ENST00000216605 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
MTHFD1-201ENST00000216605 RYR2Q92736 4967 aa5.07□□□□□ -1.6
MTHFD1-201ENST00000216605 DYNC1H1Q14204 4646 aaKnown RBP5.07□□□□□ -1.6
MTHFD1-201ENST00000216605 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
MTHFD1-201ENST00000216605 A8MUU9 505 aa5.06□□□□□ -1.6
MTHFD1-201ENST00000216605 K7ERS5 55 aa5.03□□□□□ -1.6
MTHFD1-201ENST00000216605 Q5VSD8 79 aa5.03□□□□□ -1.6
MTHFD1-201ENST00000216605 Q5W150 140 aa5.03□□□□□ -1.6
MTHFD1-201ENST00000216605 FAT1Q14517 4588 aa5.01□□□□□ -1.61
MTHFD1-201ENST00000216605 KRTAP13-3Q3SY46 172 aa5.01□□□□□ -1.61
MTHFD1-201ENST00000216605 DMAC1Q96GE9 116 aa5.01□□□□□ -1.61
MTHFD1-201ENST00000216605 FLG2Q5D862 2391 aaPredicted RBP5□□□□□ -1.61
MTHFD1-201ENST00000216605 C9orf92A6NGG3 77 aa5□□□□□ -1.61
MTHFD1-201ENST00000216605 KRTAP10-4P60372 401 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-201ENST00000216605 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
MTHFD1-201ENST00000216605 DMBT1Q9UGM3 2413 aaPredicted RBP4.97□□□□□ -1.61
MTHFD1-201ENST00000216605 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
MTHFD1-201ENST00000216605 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
MTHFD1-201ENST00000216605 APOBP04114 4563 aaKnown RBP4.95□□□□□ -1.62
MTHFD1-201ENST00000216605 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms