RNA–Protein interactions for RNA: ENST00000216420.11

CGRRF1-201, Transcript of cell growth regulator with ring finger domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGRRF1, Length 2,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-201ENST00000216420 SPACA4Q8TDM5 124 aa10.74□□□□□ -0.69
CGRRF1-201ENST00000216420 FLNBO75369 2602 aaKnown RBP10.69□□□□□ -0.7
CGRRF1-201ENST00000216420 ZNF861PO60384 105 aa10.69□□□□□ -0.7
CGRRF1-201ENST00000216420 SPINK6Q6UWN8 80 aa10.68□□□□□ -0.7
CGRRF1-201ENST00000216420 LYSTQ99698 3801 aa10.68□□□□□ -0.7
CGRRF1-201ENST00000216420 FASNP49327 2511 aaKnown RBP10.67□□□□□ -0.7
CGRRF1-201ENST00000216420 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.67□□□□□ -0.7
CGRRF1-201ENST00000216420 HECTD1Q9ULT8 2610 aa10.67□□□□□ -0.7
CGRRF1-201ENST00000216420 IGLV5-52A0A0A0MRZ9 124 aa10.66□□□□□ -0.7
CGRRF1-201ENST00000216420 MAST4O15021 2626 aa10.66□□□□□ -0.7
CGRRF1-201ENST00000216420 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.7
CGRRF1-201ENST00000216420 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
CGRRF1-201ENST00000216420 CMYA5Q8N3K9 4069 aa10.64□□□□□ -0.71
CGRRF1-201ENST00000216420 ANAPC11Q9NYG5 84 aa10.63□□□□□ -0.71
CGRRF1-201ENST00000216420 DNAH9Q9NYC9 4486 aa10.63□□□□□ -0.71
CGRRF1-201ENST00000216420 PSORS1C2Q9UIG4 136 aa10.62□□□□□ -0.71
CGRRF1-201ENST00000216420 APLNQ9ULZ1 77 aa10.62□□□□□ -0.71
CGRRF1-201ENST00000216420 HELZ2Q9BYK8 2649 aaKnown RBP10.62□□□□□ -0.71
CGRRF1-201ENST00000216420 FBN1P35555 2871 aaKnown RBP10.62□□□□□ -0.71
CGRRF1-201ENST00000216420 Q6ZRN7 208 aaPredicted RBP10.61□□□□□ -0.71
CGRRF1-201ENST00000216420 J3QKU1 62 aa10.59□□□□□ -0.71
CGRRF1-201ENST00000216420 CSMD3Q7Z407 3707 aa10.59□□□□□ -0.71
CGRRF1-201ENST00000216420 HUWE1Q7Z6Z7 4374 aaKnown RBP10.58□□□□□ -0.72
CGRRF1-201ENST00000216420 SSBP3-AS1Q7Z2R9 100 aa10.54□□□□□ -0.72
CGRRF1-201ENST00000216420 IGKV2D-30A0A075B6S6 120 aa10.54□□□□□ -0.72
CGRRF1-201ENST00000216420 NBDYA0A0U1RRE5 68 aa10.54□□□□□ -0.72
CGRRF1-201ENST00000216420 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
CGRRF1-201ENST00000216420 CIRBP-AS1Q8TBR5 109 aa10.51□□□□□ -0.73
CGRRF1-201ENST00000216420 DNAH8Q96JB1 4490 aa10.47□□□□□ -0.73
CGRRF1-201ENST00000216420 A8MUU9 505 aa10.47□□□□□ -0.73
CGRRF1-201ENST00000216420 KRTAP25-1Q3LHN0 102 aa10.46□□□□□ -0.73
CGRRF1-201ENST00000216420 KRTAP24-1Q3LI83 254 aa10.46□□□□□ -0.73
CGRRF1-201ENST00000216420 COL7A1Q02388 2944 aa10.46□□□□□ -0.74
CGRRF1-201ENST00000216420 C1orf134Q5TEV5 83 aa10.46□□□□□ -0.74
CGRRF1-201ENST00000216420 LY6G6CO95867 125 aa10.45□□□□□ -0.74
CGRRF1-201ENST00000216420 DYNC2H1Q8NCM8 4307 aaKnown RBP10.43□□□□□ -0.74
CGRRF1-201ENST00000216420 A0A087WTM6 91 aa10.4□□□□□ -0.74
CGRRF1-201ENST00000216420 ROMO1P60602 79 aa10.39□□□□□ -0.75
CGRRF1-201ENST00000216420 NBEAL1Q6ZS30 2694 aa10.39□□□□□ -0.75
CGRRF1-201ENST00000216420 H0YAA0 97 aa10.36□□□□□ -0.75
CGRRF1-201ENST00000216420 Q6ZSA8 131 aa10.35□□□□□ -0.75
CGRRF1-201ENST00000216420 NOTCH1P46531 2555 aa10.35□□□□□ -0.75
CGRRF1-201ENST00000216420 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
CGRRF1-201ENST00000216420 COL6A5A8TX70 2615 aa10.32□□□□□ -0.76
CGRRF1-201ENST00000216420 STAB1Q9NY15 2570 aa10.29□□□□□ -0.76
CGRRF1-201ENST00000216420 FRAS1Q86XX4 4008 aa10.26□□□□□ -0.77
CGRRF1-201ENST00000216420 SPINK1P00995 79 aa10.26□□□□□ -0.77
CGRRF1-201ENST00000216420 DNAH7Q8WXX0 4024 aa10.25□□□□□ -0.77
CGRRF1-201ENST00000216420 HECTD4Q9Y4D8 3996 aa10.25□□□□□ -0.77
CGRRF1-201ENST00000216420 STAB2Q8WWQ8 2551 aa10.24□□□□□ -0.77
CGRRF1-201ENST00000216420 KRTAP13-2Q52LG2 175 aa10.23□□□□□ -0.77
CGRRF1-201ENST00000216420 NUPR2A6NF83 97 aa10.22□□□□□ -0.77
CGRRF1-201ENST00000216420 A0A1B0GU33 70 aa10.2□□□□□ -0.78
CGRRF1-201ENST00000216420 Q8N1X5 172 aa10.19□□□□□ -0.78
CGRRF1-201ENST00000216420 DNAH17Q9UFH2 4485 aa10.19□□□□□ -0.78
CGRRF1-201ENST00000216420 H1FX-AS1Q4G0G2 97 aa10.17□□□□□ -0.78
CGRRF1-201ENST00000216420 MEGF8Q7Z7M0 2845 aa10.16□□□□□ -0.78
CGRRF1-201ENST00000216420 TYMSOSQ8TAI1 123 aa10.16□□□□□ -0.78
CGRRF1-201ENST00000216420 PLECQ15149 4684 aaKnown RBP10.14□□□□□ -0.79
CGRRF1-201ENST00000216420 VPS13DQ5THJ4 4388 aa10.13□□□□□ -0.79
CGRRF1-201ENST00000216420 P0C880 135 aa10.07□□□□□ -0.8
CGRRF1-201ENST00000216420 K7ERS5 55 aa10.05□□□□□ -0.8
CGRRF1-201ENST00000216420 TGP01266 2768 aa10.05□□□□□ -0.8
CGRRF1-201ENST00000216420 PRKDCP78527 4128 aaKnown RBP10.01□□□□□ -0.81
CGRRF1-201ENST00000216420 KRTAP1-4P0C5Y4 121 aa10.01□□□□□ -0.81
CGRRF1-201ENST00000216420 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
CGRRF1-201ENST00000216420 FBN3Q75N90 2809 aa9.95□□□□□ -0.82
CGRRF1-201ENST00000216420 DNAH2Q9P225 4427 aa9.92□□□□□ -0.82
CGRRF1-201ENST00000216420 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
CGRRF1-201ENST00000216420 CRIPTQ9P021 101 aa9.91□□□□□ -0.82
CGRRF1-201ENST00000216420 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
CGRRF1-201ENST00000216420 DNAH11Q96DT5 4516 aa9.87□□□□□ -0.83
CGRRF1-201ENST00000216420 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
CGRRF1-201ENST00000216420 C20orf166-AS1Q96NR2 134 aa9.86□□□□□ -0.83
CGRRF1-201ENST00000216420 STARD9Q9P2P6 4700 aa9.85□□□□□ -0.83
CGRRF1-201ENST00000216420 DNAH6Q9C0G6 4158 aa9.83□□□□□ -0.84
CGRRF1-201ENST00000216420 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
CGRRF1-201ENST00000216420 RPL37P61927 97 aaKnown RBP9.79□□□□□ -0.84
CGRRF1-201ENST00000216420 KRTAP10-2P60368 255 aa9.78□□□□□ -0.84
CGRRF1-201ENST00000216420 TPRXLQ17RH7 258 aa9.76□□□□□ -0.85
CGRRF1-201ENST00000216420 KMT2AQ03164 3969 aa9.75□□□□□ -0.85
CGRRF1-201ENST00000216420 SPINT4Q6UDR6 99 aa9.75□□□□□ -0.85
CGRRF1-201ENST00000216420 DNAH5Q8TE73 4624 aa9.73□□□□□ -0.85
CGRRF1-201ENST00000216420 KRTAP15-1Q3LI76 137 aa9.71□□□□□ -0.85
CGRRF1-201ENST00000216420 KRTAP10-1P60331 282 aa9.69□□□□□ -0.86
CGRRF1-201ENST00000216420 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
CGRRF1-201ENST00000216420 LRP1BQ9NZR2 4599 aa9.66□□□□□ -0.86
CGRRF1-201ENST00000216420 KRTAP13-4Q3LI77 160 aa9.61□□□□□ -0.87
CGRRF1-201ENST00000216420 C9orf92A6NGG3 77 aa9.6□□□□□ -0.87
CGRRF1-201ENST00000216420 NDUFAF8A1L188 74 aa9.59□□□□□ -0.87
CGRRF1-201ENST00000216420 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
CGRRF1-201ENST00000216420 SACSQ9NZJ4 4579 aa9.55□□□□□ -0.88
CGRRF1-201ENST00000216420 VPS13BQ7Z7G8 4022 aa9.54□□□□□ -0.88
CGRRF1-201ENST00000216420 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
CGRRF1-201ENST00000216420 C10orf95Q9H7T3 257 aa9.52□□□□□ -0.88
CGRRF1-201ENST00000216420 PKD1P98161 4303 aa9.5□□□□□ -0.89
CGRRF1-201ENST00000216420 A0A0D9SG42 100 aa9.49□□□□□ -0.89
CGRRF1-201ENST00000216420 S4R3F8 94 aa9.45□□□□□ -0.9
CGRRF1-201ENST00000216420 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
CGRRF1-201ENST00000216420 KRTAP12-2P59991 146 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms