RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 IGKV2-30P06310 120 aa6.06□□□□□ -1.44
CLDN18-201ENST00000183605 Q5W150 140 aa6.05□□□□□ -1.44
CLDN18-201ENST00000183605 Q96NJ1 140 aa6.04□□□□□ -1.44
CLDN18-201ENST00000183605 KRTAP1-5Q9BYS1 174 aa6.04□□□□□ -1.44
CLDN18-201ENST00000183605 FAM229AH3BQW9 127 aa6□□□□□ -1.45
CLDN18-201ENST00000183605 FBN1P35555 2871 aaKnown RBP6□□□□□ -1.45
CLDN18-201ENST00000183605 SPATA8Q6RVD6 105 aa5.99□□□□□ -1.45
CLDN18-201ENST00000183605 TRRAPQ9Y4A5 3859 aa5.99□□□□□ -1.45
CLDN18-201ENST00000183605 RTL8CO15255 209 aa5.99□□□□□ -1.45
CLDN18-201ENST00000183605 STAB2Q8WWQ8 2551 aa5.99□□□□□ -1.45
CLDN18-201ENST00000183605 PANO1I0J062 215 aa5.98□□□□□ -1.45
CLDN18-201ENST00000183605 ASB16-AS1Q495Z4 193 aa5.98□□□□□ -1.45
CLDN18-201ENST00000183605 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
CLDN18-201ENST00000183605 DNHD1Q96M86 4753 aa5.97□□□□□ -1.45
CLDN18-201ENST00000183605 PSORS1C2Q9UIG4 136 aa5.96□□□□□ -1.46
CLDN18-201ENST00000183605 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.46
CLDN18-201ENST00000183605 WWC2-AS2Q96NR7 200 aa5.95□□□□□ -1.46
CLDN18-201ENST00000183605 C1orf134Q5TEV5 83 aa5.95□□□□□ -1.46
CLDN18-201ENST00000183605 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
CLDN18-201ENST00000183605 ZNF861PO60384 105 aa5.94□□□□□ -1.46
CLDN18-201ENST00000183605 COL7A1Q02388 2944 aa5.93□□□□□ -1.46
CLDN18-201ENST00000183605 NBDYA0A0U1RRE5 68 aa5.91□□□□□ -1.46
CLDN18-201ENST00000183605 KRTAP13-1Q8IUC0 172 aa5.9□□□□□ -1.46
CLDN18-201ENST00000183605 KRTAP24-1Q3LI83 254 aa5.9□□□□□ -1.47
CLDN18-201ENST00000183605 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
CLDN18-201ENST00000183605 IGLV5-52A0A0A0MRZ9 124 aa5.88□□□□□ -1.47
CLDN18-201ENST00000183605 K7ERS5 55 aa5.88□□□□□ -1.47
CLDN18-201ENST00000183605 Q8N1X5 172 aa5.88□□□□□ -1.47
CLDN18-201ENST00000183605 SPACA4Q8TDM5 124 aa5.88□□□□□ -1.47
CLDN18-201ENST00000183605 TENM2Q9NT68 2774 aa5.88□□□□□ -1.47
CLDN18-201ENST00000183605 APLNQ9ULZ1 77 aa5.85□□□□□ -1.47
CLDN18-201ENST00000183605 CRIPTQ9P021 101 aa5.84□□□□□ -1.47
CLDN18-201ENST00000183605 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.47
CLDN18-201ENST00000183605 SSBP3-AS1Q7Z2R9 100 aa5.83□□□□□ -1.48
CLDN18-201ENST00000183605 IGLV7-43P04211 117 aa5.83□□□□□ -1.48
CLDN18-201ENST00000183605 A0A087WTM6 91 aa5.81□□□□□ -1.48
CLDN18-201ENST00000183605 DMBT1Q9UGM3 2413 aaPredicted RBP5.81□□□□□ -1.48
CLDN18-201ENST00000183605 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
CLDN18-201ENST00000183605 TGP01266 2768 aa5.79□□□□□ -1.48
CLDN18-201ENST00000183605 J3QL48 77 aa5.79□□□□□ -1.48
CLDN18-201ENST00000183605 DYNC2H1Q8NCM8 4307 aaKnown RBP5.79□□□□□ -1.48
CLDN18-201ENST00000183605 DNAH7Q8WXX0 4024 aa5.79□□□□□ -1.48
CLDN18-201ENST00000183605 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
CLDN18-201ENST00000183605 DNAH6Q9C0G6 4158 aa5.77□□□□□ -1.49
CLDN18-201ENST00000183605 NUPR2A6NF83 97 aa5.77□□□□□ -1.49
CLDN18-201ENST00000183605 A0A1B0GU33 70 aa5.76□□□□□ -1.49
CLDN18-201ENST00000183605 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
CLDN18-201ENST00000183605 LY6G6CO95867 125 aa5.75□□□□□ -1.49
CLDN18-201ENST00000183605 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
CLDN18-201ENST00000183605 ROMO1P60602 79 aa5.74□□□□□ -1.49
CLDN18-201ENST00000183605 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
CLDN18-201ENST00000183605 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
CLDN18-201ENST00000183605 DNAH1Q9P2D7 4330 aa5.69□□□□□ -1.5
CLDN18-201ENST00000183605 Q6ZSA8 131 aa5.68□□□□□ -1.5
CLDN18-201ENST00000183605 A8MUU9 505 aa5.67□□□□□ -1.5
CLDN18-201ENST00000183605 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
CLDN18-201ENST00000183605 H0YAA0 97 aa5.66□□□□□ -1.5
CLDN18-201ENST00000183605 TYMSOSQ8TAI1 123 aa5.66□□□□□ -1.5
CLDN18-201ENST00000183605 DNAH9Q9NYC9 4486 aa5.65□□□□□ -1.51
CLDN18-201ENST00000183605 H1FX-AS1Q4G0G2 97 aa5.64□□□□□ -1.51
CLDN18-201ENST00000183605 LYSTQ99698 3801 aa5.64□□□□□ -1.51
CLDN18-201ENST00000183605 PRKDCP78527 4128 aaKnown RBP5.63□□□□□ -1.51
CLDN18-201ENST00000183605 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
CLDN18-201ENST00000183605 A0A0D9SG42 100 aa5.62□□□□□ -1.51
CLDN18-201ENST00000183605 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
CLDN18-201ENST00000183605 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
CLDN18-201ENST00000183605 KRTAP16-1A8MUX0 517 aa5.6□□□□□ -1.51
CLDN18-201ENST00000183605 MEGF8Q7Z7M0 2845 aa5.59□□□□□ -1.51
CLDN18-201ENST00000183605 HUWE1Q7Z6Z7 4374 aaKnown RBP5.52□□□□□ -1.53
CLDN18-201ENST00000183605 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
CLDN18-201ENST00000183605 NDUFAF8A1L188 74 aa5.51□□□□□ -1.53
CLDN18-201ENST00000183605 RPL37P61927 97 aaKnown RBP5.51□□□□□ -1.53
CLDN18-201ENST00000183605 COX6B2Q6YFQ2 88 aa5.51□□□□□ -1.53
CLDN18-201ENST00000183605 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
CLDN18-201ENST00000183605 P0C880 135 aa5.48□□□□□ -1.53
CLDN18-201ENST00000183605 RYR2Q92736 4967 aa5.46□□□□□ -1.53
CLDN18-201ENST00000183605 FRAS1Q86XX4 4008 aa5.44□□□□□ -1.54
CLDN18-201ENST00000183605 DNAH17Q9UFH2 4485 aa5.44□□□□□ -1.54
CLDN18-201ENST00000183605 KRTAP10-1P60331 282 aa5.44□□□□□ -1.54
CLDN18-201ENST00000183605 C10orf95Q9H7T3 257 aa5.44□□□□□ -1.54
CLDN18-201ENST00000183605 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
CLDN18-201ENST00000183605 FAT2Q9NYQ8 4349 aa5.4□□□□□ -1.54
CLDN18-201ENST00000183605 SMR3BP02814 79 aaPredicted RBP5.39□□□□□ -1.55
CLDN18-201ENST00000183605 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
CLDN18-201ENST00000183605 SACSQ9NZJ4 4579 aa5.39□□□□□ -1.55
CLDN18-201ENST00000183605 HECTD4Q9Y4D8 3996 aa5.39□□□□□ -1.55
CLDN18-201ENST00000183605 VPS13DQ5THJ4 4388 aa5.37□□□□□ -1.55
CLDN18-201ENST00000183605 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
CLDN18-201ENST00000183605 PLECQ15149 4684 aaKnown RBP5.36□□□□□ -1.55
CLDN18-201ENST00000183605 RYR3Q15413 4870 aa5.36□□□□□ -1.55
CLDN18-201ENST00000183605 TPRXLQ17RH7 258 aa5.35□□□□□ -1.55
CLDN18-201ENST00000183605 STARD9Q9P2P6 4700 aa5.35□□□□□ -1.55
CLDN18-201ENST00000183605 DNAH8Q96JB1 4490 aa5.34□□□□□ -1.55
CLDN18-201ENST00000183605 KMT2CQ8NEZ4 4911 aaKnown RBP5.28□□□□□ -1.56
CLDN18-201ENST00000183605 DNAH2Q9P225 4427 aa5.28□□□□□ -1.56
CLDN18-201ENST00000183605 S4R3F8 94 aa5.28□□□□□ -1.56
CLDN18-201ENST00000183605 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
CLDN18-201ENST00000183605 BIRC6Q9NR09 4857 aa5.25□□□□□ -1.57
CLDN18-201ENST00000183605 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
CLDN18-201ENST00000183605 DYNC1H1Q14204 4646 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms