RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 SPINK7P58062 85 aa10.26□□□□□ -0.77
PTPN18-201ENST00000175756 Q75L30 129 aa10.24□□□□□ -0.77
PTPN18-201ENST00000175756 A0A1B0GU69 56 aa10.24□□□□□ -0.77
PTPN18-201ENST00000175756 KTN1-AS1Q86SY8 53 aa10.22□□□□□ -0.77
PTPN18-201ENST00000175756 Q96NJ1 140 aa10.21□□□□□ -0.77
PTPN18-201ENST00000175756 CDC42SE1Q9NRR8 79 aa10.21□□□□□ -0.77
PTPN18-201ENST00000175756 IGLV7-43P04211 117 aa10.2□□□□□ -0.78
PTPN18-201ENST00000175756 Q5W150 140 aa10.2□□□□□ -0.78
PTPN18-201ENST00000175756 KRTAP13-1Q8IUC0 172 aa10.17□□□□□ -0.78
PTPN18-201ENST00000175756 LINC01558Q9Y6Z2 57 aa10.17□□□□□ -0.78
PTPN18-201ENST00000175756 Q6ZRN7 208 aaPredicted RBP10.15□□□□□ -0.78
PTPN18-201ENST00000175756 C7orf65Q6ZTY9 151 aa10.15□□□□□ -0.78
PTPN18-201ENST00000175756 FBN3Q75N90 2809 aa10.15□□□□□ -0.79
PTPN18-201ENST00000175756 Q6ZR54 194 aa10.14□□□□□ -0.79
PTPN18-201ENST00000175756 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
PTPN18-201ENST00000175756 RBM12B-AS1Q9P1G2 102 aa10.11□□□□□ -0.79
PTPN18-201ENST00000175756 LINC00483Q53H64 154 aa10.1□□□□□ -0.79
PTPN18-201ENST00000175756 ANK2Q01484 3957 aa10.09□□□□□ -0.79
PTPN18-201ENST00000175756 SSBP3-AS1Q7Z2R9 100 aa10.09□□□□□ -0.79
PTPN18-201ENST00000175756 PLAC8Q9NZF1 115 aa10.09□□□□□ -0.79
PTPN18-201ENST00000175756 C8orf87E5RJ46 101 aa10.08□□□□□ -0.8
PTPN18-201ENST00000175756 PRAC1Q96KF2 57 aa10.06□□□□□ -0.8
PTPN18-201ENST00000175756 DNAH10Q8IVF4 4471 aa10.05□□□□□ -0.8
PTPN18-201ENST00000175756 PLA2G1BP04054 148 aaKnown RBP10.03□□□□□ -0.8
PTPN18-201ENST00000175756 Q8N1X5 172 aa10.02□□□□□ -0.81
PTPN18-201ENST00000175756 TYMSOSQ8TAI1 123 aa10□□□□□ -0.81
PTPN18-201ENST00000175756 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
PTPN18-201ENST00000175756 MEGF8Q7Z7M0 2845 aa9.98□□□□□ -0.81
PTPN18-201ENST00000175756 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
PTPN18-201ENST00000175756 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
PTPN18-201ENST00000175756 UQCR11O14957 56 aa9.97□□□□□ -0.81
PTPN18-201ENST00000175756 HUWE1Q7Z6Z7 4374 aaKnown RBP9.94□□□□□ -0.82
PTPN18-201ENST00000175756 A6NN06 94 aa9.94□□□□□ -0.82
PTPN18-201ENST00000175756 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
PTPN18-201ENST00000175756 C9orf92A6NGG3 77 aa9.9□□□□□ -0.82
PTPN18-201ENST00000175756 FLG2Q5D862 2391 aaPredicted RBP9.9□□□□□ -0.83
PTPN18-201ENST00000175756 SMR3BP02814 79 aaPredicted RBP9.89□□□□□ -0.83
PTPN18-201ENST00000175756 DMAC1Q96GE9 116 aa9.87□□□□□ -0.83
PTPN18-201ENST00000175756 ADM2Q7Z4H4 148 aa9.87□□□□□ -0.83
PTPN18-201ENST00000175756 LYSTQ99698 3801 aa9.86□□□□□ -0.83
PTPN18-201ENST00000175756 KRTAP10-1P60331 282 aa9.83□□□□□ -0.84
PTPN18-201ENST00000175756 KRTAP13-2Q52LG2 175 aa9.82□□□□□ -0.84
PTPN18-201ENST00000175756 LINC00304Q8N9R0 145 aa9.75□□□□□ -0.85
PTPN18-201ENST00000175756 DNAH9Q9NYC9 4486 aa9.71□□□□□ -0.85
PTPN18-201ENST00000175756 CSAG1Q6PB30 78 aa9.67□□□□□ -0.86
PTPN18-201ENST00000175756 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
PTPN18-201ENST00000175756 PLECQ15149 4684 aaKnown RBP9.66□□□□□ -0.86
PTPN18-201ENST00000175756 K7ERS5 55 aa9.65□□□□□ -0.86
PTPN18-201ENST00000175756 SPATA8Q6RVD6 105 aa9.64□□□□□ -0.87
PTPN18-201ENST00000175756 LINC01554Q52M75 96 aa9.62□□□□□ -0.87
PTPN18-201ENST00000175756 CRIPTQ9P021 101 aa9.59□□□□□ -0.87
PTPN18-201ENST00000175756 A0A1B0GU33 70 aa9.54□□□□□ -0.88
PTPN18-201ENST00000175756 CMYA5Q8N3K9 4069 aa9.53□□□□□ -0.88
PTPN18-201ENST00000175756 DNAH7Q8WXX0 4024 aa9.53□□□□□ -0.88
PTPN18-201ENST00000175756 KRTAP16-1A8MUX0 517 aa9.52□□□□□ -0.88
PTPN18-201ENST00000175756 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.88
PTPN18-201ENST00000175756 DNHD1Q96M86 4753 aa9.52□□□□□ -0.89
PTPN18-201ENST00000175756 DNAH1Q9P2D7 4330 aa9.48□□□□□ -0.89
PTPN18-201ENST00000175756 A0A0D9SG42 100 aa9.47□□□□□ -0.89
PTPN18-201ENST00000175756 FRAS1Q86XX4 4008 aa9.46□□□□□ -0.9
PTPN18-201ENST00000175756 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
PTPN18-201ENST00000175756 DNAH8Q96JB1 4490 aa9.4□□□□□ -0.9
PTPN18-201ENST00000175756 KMT2AQ03164 3969 aa9.4□□□□□ -0.91
PTPN18-201ENST00000175756 Q6ZSA8 131 aa9.4□□□□□ -0.91
PTPN18-201ENST00000175756 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
PTPN18-201ENST00000175756 DNAH11Q96DT5 4516 aa9.36□□□□□ -0.91
PTPN18-201ENST00000175756 PRKDCP78527 4128 aaKnown RBP9.34□□□□□ -0.91
PTPN18-201ENST00000175756 H1FX-AS1Q4G0G2 97 aa9.32□□□□□ -0.92
PTPN18-201ENST00000175756 H0YAA0 97 aa9.29□□□□□ -0.92
PTPN18-201ENST00000175756 H3BS24 57 aa9.27□□□□□ -0.93
PTPN18-201ENST00000175756 DNAH17Q9UFH2 4485 aa9.27□□□□□ -0.93
PTPN18-201ENST00000175756 VPS13DQ5THJ4 4388 aa9.24□□□□□ -0.93
PTPN18-201ENST00000175756 SPINT4Q6UDR6 99 aa9.21□□□□□ -0.93
PTPN18-201ENST00000175756 COX6B2Q6YFQ2 88 aa9.2□□□□□ -0.94
PTPN18-201ENST00000175756 LRP1BQ9NZR2 4599 aa9.19□□□□□ -0.94
PTPN18-201ENST00000175756 A8MUU9 505 aa9.17□□□□□ -0.94
PTPN18-201ENST00000175756 DNAH6Q9C0G6 4158 aa9.16□□□□□ -0.94
PTPN18-201ENST00000175756 DNAH2Q9P225 4427 aa9.15□□□□□ -0.94
PTPN18-201ENST00000175756 KRTAP25-1Q3LHN0 102 aa9.15□□□□□ -0.95
PTPN18-201ENST00000175756 C20orf166-AS1Q96NR2 134 aa9.14□□□□□ -0.95
PTPN18-201ENST00000175756 HECTD4Q9Y4D8 3996 aa9.14□□□□□ -0.95
PTPN18-201ENST00000175756 KRTAP3-1Q9BYR8 98 aa9.1□□□□□ -0.95
PTPN18-201ENST00000175756 RPS29P62273 56 aaKnown RBP9.1□□□□□ -0.95
PTPN18-201ENST00000175756 RPL37P61927 97 aaKnown RBP9.08□□□□□ -0.96
PTPN18-201ENST00000175756 S4R3F8 94 aa9.04□□□□□ -0.96
PTPN18-201ENST00000175756 ROMO1P60602 79 aa9.03□□□□□ -0.96
PTPN18-201ENST00000175756 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
PTPN18-201ENST00000175756 Q5VSD8 79 aa8.94□□□□□ -0.98
PTPN18-201ENST00000175756 DYNC2H1Q8NCM8 4307 aaKnown RBP8.94□□□□□ -0.98
PTPN18-201ENST00000175756 FAT1Q14517 4588 aa8.94□□□□□ -0.98
PTPN18-201ENST00000175756 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
PTPN18-201ENST00000175756 C10orf95Q9H7T3 257 aa8.92□□□□□ -0.98
PTPN18-201ENST00000175756 ALMS1Q8TCU4 4167 aa8.91□□□□□ -0.98
PTPN18-201ENST00000175756 P0C880 135 aa8.84□□□□□ -0.99
PTPN18-201ENST00000175756 HYDINQ4G0P3 5121 aa8.81□□□□□ -1
PTPN18-201ENST00000175756 XP32Q5T750 250 aa8.78□□□□□ -1
PTPN18-201ENST00000175756 KRTAP10-8P60410 259 aa8.77□□□□□ -1
PTPN18-201ENST00000175756 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
PTPN18-201ENST00000175756 KRTAP21-3Q3LHN1 58 aa8.75□□□□□ -1.01
PTPN18-201ENST00000175756 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms