RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CDC42SE1Q9NRR8 79 aa10□□□□□ -0.81
CTDP1-201ENST00000075430 RTL8CO15255 209 aa9.98□□□□□ -0.81
CTDP1-201ENST00000075430 SPINK1P00995 79 aa9.97□□□□□ -0.81
CTDP1-201ENST00000075430 ADM2Q7Z4H4 148 aa9.97□□□□□ -0.81
CTDP1-201ENST00000075430 DNAH7Q8WXX0 4024 aa9.97□□□□□ -0.81
CTDP1-201ENST00000075430 A0A087WTM6 91 aa9.96□□□□□ -0.81
CTDP1-201ENST00000075430 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.81
CTDP1-201ENST00000075430 FLG2Q5D862 2391 aaPredicted RBP9.95□□□□□ -0.82
CTDP1-201ENST00000075430 MEGF8Q7Z7M0 2845 aa9.95□□□□□ -0.82
CTDP1-201ENST00000075430 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
CTDP1-201ENST00000075430 WWC2-AS2Q96NR7 200 aa9.94□□□□□ -0.82
CTDP1-201ENST00000075430 IGKV2D-30A0A075B6S6 120 aa9.93□□□□□ -0.82
CTDP1-201ENST00000075430 IGKV2-30P06310 120 aa9.93□□□□□ -0.82
CTDP1-201ENST00000075430 A6NN06 94 aa9.93□□□□□ -0.82
CTDP1-201ENST00000075430 DMBT1Q9UGM3 2413 aaPredicted RBP9.9□□□□□ -0.82
CTDP1-201ENST00000075430 FRAS1Q86XX4 4008 aa9.9□□□□□ -0.83
CTDP1-201ENST00000075430 KRTAP13-1Q8IUC0 172 aa9.89□□□□□ -0.83
CTDP1-201ENST00000075430 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
CTDP1-201ENST00000075430 C1orf134Q5TEV5 83 aa9.89□□□□□ -0.83
CTDP1-201ENST00000075430 Q6ZR54 194 aa9.88□□□□□ -0.83
CTDP1-201ENST00000075430 C7orf65Q6ZTY9 151 aa9.87□□□□□ -0.83
CTDP1-201ENST00000075430 ZNF861PO60384 105 aa9.87□□□□□ -0.83
CTDP1-201ENST00000075430 ZNF706Q9Y5V0 76 aaPredicted RBP9.87□□□□□ -0.83
CTDP1-201ENST00000075430 A0A1B0GU69 56 aa9.86□□□□□ -0.83
CTDP1-201ENST00000075430 Q6ZRN7 208 aaPredicted RBP9.86□□□□□ -0.83
CTDP1-201ENST00000075430 PLECQ15149 4684 aaKnown RBP9.86□□□□□ -0.83
CTDP1-201ENST00000075430 ACYP2P14621 99 aa9.85□□□□□ -0.83
CTDP1-201ENST00000075430 LINC00313P59037 77 aa9.84□□□□□ -0.83
CTDP1-201ENST00000075430 DNAH1Q9P2D7 4330 aa9.84□□□□□ -0.83
CTDP1-201ENST00000075430 DNAH3Q8TD57 4116 aa9.8□□□□□ -0.84
CTDP1-201ENST00000075430 ASB16-AS1Q495Z4 193 aa9.76□□□□□ -0.85
CTDP1-201ENST00000075430 Q8N1X5 172 aa9.73□□□□□ -0.85
CTDP1-201ENST00000075430 IGLV7-43P04211 117 aa9.72□□□□□ -0.85
CTDP1-201ENST00000075430 LINC00483Q53H64 154 aa9.72□□□□□ -0.85
CTDP1-201ENST00000075430 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
CTDP1-201ENST00000075430 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
CTDP1-201ENST00000075430 STARD9Q9P2P6 4700 aa9.68□□□□□ -0.86
CTDP1-201ENST00000075430 MIR22HGQ0VDD5 57 aa9.68□□□□□ -0.86
CTDP1-201ENST00000075430 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
CTDP1-201ENST00000075430 KMT2AQ03164 3969 aa9.67□□□□□ -0.86
CTDP1-201ENST00000075430 PRKDCP78527 4128 aaKnown RBP9.65□□□□□ -0.86
CTDP1-201ENST00000075430 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
CTDP1-201ENST00000075430 UQCR11O14957 56 aa9.61□□□□□ -0.87
CTDP1-201ENST00000075430 DMAC1Q96GE9 116 aa9.6□□□□□ -0.87
CTDP1-201ENST00000075430 DNHD1Q96M86 4753 aa9.6□□□□□ -0.87
CTDP1-201ENST00000075430 C8orf87E5RJ46 101 aa9.59□□□□□ -0.87
CTDP1-201ENST00000075430 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.88
CTDP1-201ENST00000075430 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
CTDP1-201ENST00000075430 KRTAP13-3Q3SY46 172 aa9.57□□□□□ -0.88
CTDP1-201ENST00000075430 DNAH17Q9UFH2 4485 aa9.55□□□□□ -0.88
CTDP1-201ENST00000075430 CRIPTQ9P021 101 aa9.54□□□□□ -0.88
CTDP1-201ENST00000075430 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
CTDP1-201ENST00000075430 KRTAP10-1P60331 282 aa9.53□□□□□ -0.88
CTDP1-201ENST00000075430 SSBP3-AS1Q7Z2R9 100 aa9.53□□□□□ -0.88
CTDP1-201ENST00000075430 SMR3BP02814 79 aaPredicted RBP9.52□□□□□ -0.88
CTDP1-201ENST00000075430 DNAH11Q96DT5 4516 aa9.51□□□□□ -0.89
CTDP1-201ENST00000075430 C9orf92A6NGG3 77 aa9.51□□□□□ -0.89
CTDP1-201ENST00000075430 PLA2G1BP04054 148 aaKnown RBP9.5□□□□□ -0.89
CTDP1-201ENST00000075430 LINC01554Q52M75 96 aa9.5□□□□□ -0.89
CTDP1-201ENST00000075430 DNAH6Q9C0G6 4158 aa9.47□□□□□ -0.89
CTDP1-201ENST00000075430 HECTD4Q9Y4D8 3996 aa9.46□□□□□ -0.9
CTDP1-201ENST00000075430 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
CTDP1-201ENST00000075430 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
CTDP1-201ENST00000075430 TYMSOSQ8TAI1 123 aa9.44□□□□□ -0.9
CTDP1-201ENST00000075430 DNAH2Q9P225 4427 aa9.42□□□□□ -0.9
CTDP1-201ENST00000075430 LRP1BQ9NZR2 4599 aa9.36□□□□□ -0.91
CTDP1-201ENST00000075430 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
CTDP1-201ENST00000075430 H3BS24 57 aa9.33□□□□□ -0.92
CTDP1-201ENST00000075430 DYNC2H1Q8NCM8 4307 aaKnown RBP9.28□□□□□ -0.92
CTDP1-201ENST00000075430 ALMS1Q8TCU4 4167 aa9.24□□□□□ -0.93
CTDP1-201ENST00000075430 KRTAP1-4P0C5Y4 121 aa9.23□□□□□ -0.93
CTDP1-201ENST00000075430 Q6ZSA8 131 aa9.23□□□□□ -0.93
CTDP1-201ENST00000075430 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.94
CTDP1-201ENST00000075430 A0A1B0GU33 70 aa9.2□□□□□ -0.94
CTDP1-201ENST00000075430 H0YAA0 97 aa9.2□□□□□ -0.94
CTDP1-201ENST00000075430 A0A0D9SG42 100 aa9.18□□□□□ -0.94
CTDP1-201ENST00000075430 HYDINQ4G0P3 5121 aa9.16□□□□□ -0.94
CTDP1-201ENST00000075430 DNAH5Q8TE73 4624 aa9.15□□□□□ -0.94
CTDP1-201ENST00000075430 VPS13BQ7Z7G8 4022 aa9.15□□□□□ -0.95
CTDP1-201ENST00000075430 FAT2Q9NYQ8 4349 aa9.06□□□□□ -0.96
CTDP1-201ENST00000075430 FAT1Q14517 4588 aa9.06□□□□□ -0.96
CTDP1-201ENST00000075430 K7ERS5 55 aa9.04□□□□□ -0.96
CTDP1-201ENST00000075430 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
CTDP1-201ENST00000075430 KRTAP3-1Q9BYR8 98 aa9.02□□□□□ -0.96
CTDP1-201ENST00000075430 A8MUU9 505 aa9.02□□□□□ -0.97
CTDP1-201ENST00000075430 KRTAP25-1Q3LHN0 102 aa9□□□□□ -0.97
CTDP1-201ENST00000075430 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
CTDP1-201ENST00000075430 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
CTDP1-201ENST00000075430 MYCBP2O75592 4640 aa8.92□□□□□ -0.98
CTDP1-201ENST00000075430 SPINT4Q6UDR6 99 aa8.9□□□□□ -0.98
CTDP1-201ENST00000075430 ROMO1P60602 79 aa8.89□□□□□ -0.99
CTDP1-201ENST00000075430 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
CTDP1-201ENST00000075430 DYNC1H1Q14204 4646 aaKnown RBP8.88□□□□□ -0.99
CTDP1-201ENST00000075430 PKD1P98161 4303 aa8.82□□□□□ -1
CTDP1-201ENST00000075430 SACSQ9NZJ4 4579 aa8.78□□□□□ -1
CTDP1-201ENST00000075430 C20orf166-AS1Q96NR2 134 aa8.78□□□□□ -1
CTDP1-201ENST00000075430 KRTAP13-4Q3LI77 160 aa8.75□□□□□ -1.01
CTDP1-201ENST00000075430 RPL37P61927 97 aaKnown RBP8.74□□□□□ -1.01
CTDP1-201ENST00000075430 LRP1Q07954 4544 aaKnown RBP8.71□□□□□ -1.01
CTDP1-201ENST00000075430 Q5VSD8 79 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms