RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 LRCOL1A6NCL2 159 aa11.83□□□□□ -0.52
CLN5-216ENST00000636780 CNBPP62633 177 aaKnown RBP11.83□□□□□ -0.52
CLN5-216ENST00000636780 TNP2Q05952 138 aa11.83□□□□□ -0.52
CLN5-216ENST00000636780 VPS13DQ5THJ4 4388 aa11.81□□□□□ -0.52
CLN5-216ENST00000636780 IGKV4-1P06312 121 aa11.81□□□□□ -0.52
CLN5-216ENST00000636780 LINC00476Q8WZB0 136 aa11.81□□□□□ -0.52
CLN5-216ENST00000636780 FBN3Q75N90 2809 aa11.78□□□□□ -0.52
CLN5-216ENST00000636780 EPM2AB3EWF7 344 aa11.77□□□□□ -0.52
CLN5-216ENST00000636780 SEC61GP60059 68 aa11.77□□□□□ -0.52
CLN5-216ENST00000636780 Q6ZRN7 208 aaPredicted RBP11.77□□□□□ -0.53
CLN5-216ENST00000636780 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.76□□□□□ -0.53
CLN5-216ENST00000636780 HECTD4Q9Y4D8 3996 aa11.76□□□□□ -0.53
CLN5-216ENST00000636780 FAM236DA0A1B0GTK5 79 aa11.75□□□□□ -0.53
CLN5-216ENST00000636780 FAM236CP0DP71 79 aa11.75□□□□□ -0.53
CLN5-216ENST00000636780 IGFL1Q6UW32 110 aa11.75□□□□□ -0.53
CLN5-216ENST00000636780 C9orf163Q8N9P6 203 aa11.75□□□□□ -0.53
CLN5-216ENST00000636780 Q8NBF4 154 aa11.75□□□□□ -0.53
CLN5-216ENST00000636780 TRAV7A0A075B6U4 112 aa11.72□□□□□ -0.53
CLN5-216ENST00000636780 K7EQZ3 153 aa11.7□□□□□ -0.54
CLN5-216ENST00000636780 NUPR2A6NF83 97 aa11.7□□□□□ -0.54
CLN5-216ENST00000636780 UBE2AP49459 152 aa11.7□□□□□ -0.54
CLN5-216ENST00000636780 FP248Q71RG6 208 aaPredicted RBP11.7□□□□□ -0.54
CLN5-216ENST00000636780 A0A087WSZ3 146 aa11.69□□□□□ -0.54
CLN5-216ENST00000636780 RPL37AP61513 92 aaKnown RBP11.69□□□□□ -0.54
CLN5-216ENST00000636780 FAM30AQ9NZY2 134 aa11.69□□□□□ -0.54
CLN5-216ENST00000636780 A0A0U1RQV1 116 aa11.69□□□□□ -0.54
CLN5-216ENST00000636780 F8WEM9 126 aa11.69□□□□□ -0.54
CLN5-216ENST00000636780 DSCR10P59022 87 aa11.69□□□□□ -0.54
CLN5-216ENST00000636780 SERP1Q9Y6X1 66 aa11.67□□□□□ -0.54
CLN5-216ENST00000636780 V9GYY9 64 aa11.67□□□□□ -0.54
CLN5-216ENST00000636780 C14orf177Q52M58 125 aa11.66□□□□□ -0.54
CLN5-216ENST00000636780 DNAH6Q9C0G6 4158 aa11.66□□□□□ -0.54
CLN5-216ENST00000636780 SPRR4Q96PI1 79 aa11.66□□□□□ -0.54
CLN5-216ENST00000636780 DNAH17Q9UFH2 4485 aa11.65□□□□□ -0.54
CLN5-216ENST00000636780 H7BZZ5 65 aa11.65□□□□□ -0.54
CLN5-216ENST00000636780 ANAPC11Q9NYG5 84 aa11.64□□□□□ -0.55
CLN5-216ENST00000636780 DNAH8Q96JB1 4490 aa11.64□□□□□ -0.55
CLN5-216ENST00000636780 C1orf195Q5TG92 126 aa11.63□□□□□ -0.55
CLN5-216ENST00000636780 A0A087WTM6 91 aa11.62□□□□□ -0.55
CLN5-216ENST00000636780 BRK1Q8WUW1 75 aa11.62□□□□□ -0.55
CLN5-216ENST00000636780 LINC00474Q9P2X8 69 aa11.62□□□□□ -0.55
CLN5-216ENST00000636780 OCR1Q9BZK8 76 aa11.6□□□□□ -0.55
CLN5-216ENST00000636780 IGLV9-49A0A0B4J1Y8 123 aa11.59□□□□□ -0.55
CLN5-216ENST00000636780 WFDC13Q8IUB5 93 aa11.57□□□□□ -0.56
CLN5-216ENST00000636780 TMEM254Q8TBM7 123 aa11.57□□□□□ -0.56
CLN5-216ENST00000636780 SMIM26A0A096LP01 95 aa11.56□□□□□ -0.56
CLN5-216ENST00000636780 SPACA4Q8TDM5 124 aa11.56□□□□□ -0.56
CLN5-216ENST00000636780 RTL8CO15255 209 aa11.56□□□□□ -0.56
CLN5-216ENST00000636780 LY6G6CO95867 125 aa11.55□□□□□ -0.56
CLN5-216ENST00000636780 KLKP1Q107X0 134 aa11.55□□□□□ -0.56
CLN5-216ENST00000636780 HYDINQ4G0P3 5121 aa11.54□□□□□ -0.56
CLN5-216ENST00000636780 BCE1O60756 84 aa11.53□□□□□ -0.56
CLN5-216ENST00000636780 DNAH11Q96DT5 4516 aa11.53□□□□□ -0.56
CLN5-216ENST00000636780 KRTAP13-1Q8IUC0 172 aa11.5□□□□□ -0.57
CLN5-216ENST00000636780 PSORS1C2Q9UIG4 136 aa11.5□□□□□ -0.57
CLN5-216ENST00000636780 IGLV8-61A0A075B6I0 122 aa11.48□□□□□ -0.57
CLN5-216ENST00000636780 Q6ZR54 194 aa11.48□□□□□ -0.57
CLN5-216ENST00000636780 H0Y9J4 135 aa11.45□□□□□ -0.58
CLN5-216ENST00000636780 FAM229BQ4G0N7 80 aa11.45□□□□□ -0.58
CLN5-216ENST00000636780 IGLV5-52A0A0A0MRZ9 124 aa11.44□□□□□ -0.58
CLN5-216ENST00000636780 HCG22E2RYF7 251 aa11.44□□□□□ -0.58
CLN5-216ENST00000636780 DNAH5Q8TE73 4624 aa11.44□□□□□ -0.58
CLN5-216ENST00000636780 A0A1B0GW54 56 aa11.44□□□□□ -0.58
CLN5-216ENST00000636780 SPRR1BP22528 89 aa11.43□□□□□ -0.58
CLN5-216ENST00000636780 MPLKIPQ8TAP9 179 aa11.42□□□□□ -0.58
CLN5-216ENST00000636780 C1orf134Q5TEV5 83 aa11.42□□□□□ -0.58
CLN5-216ENST00000636780 PRR4Q16378 134 aa11.41□□□□□ -0.58
CLN5-216ENST00000636780 KRTAP10-2P60368 255 aa11.41□□□□□ -0.58
CLN5-216ENST00000636780 MOBPQ13875 183 aa11.39□□□□□ -0.59
CLN5-216ENST00000636780 ALMS1Q8TCU4 4167 aa11.38□□□□□ -0.59
CLN5-216ENST00000636780 LINC00472Q9H8W2 130 aa11.38□□□□□ -0.59
CLN5-216ENST00000636780 LRP1BQ9NZR2 4599 aa11.38□□□□□ -0.59
CLN5-216ENST00000636780 PRR15Q8IV56 129 aa11.32□□□□□ -0.6
CLN5-216ENST00000636780 WWC2-AS2Q96NR7 200 aa11.32□□□□□ -0.6
CLN5-216ENST00000636780 PLAC8Q9NZF1 115 aa11.32□□□□□ -0.6
CLN5-216ENST00000636780 CASC2Q6XLA1 102 aa11.31□□□□□ -0.6
CLN5-216ENST00000636780 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
CLN5-216ENST00000636780 ZNF861PO60384 105 aa11.29□□□□□ -0.6
CLN5-216ENST00000636780 PMAIP1Q13794 54 aa11.29□□□□□ -0.6
CLN5-216ENST00000636780 PKD1P98161 4303 aa11.28□□□□□ -0.6
CLN5-216ENST00000636780 A8MWP4 228 aa11.28□□□□□ -0.6
CLN5-216ENST00000636780 CIRBP-AS1Q8TBR5 109 aa11.28□□□□□ -0.6
CLN5-216ENST00000636780 Q96NJ1 140 aa11.28□□□□□ -0.6
CLN5-216ENST00000636780 FAT2Q9NYQ8 4349 aa11.27□□□□□ -0.6
CLN5-216ENST00000636780 NDUFC1O43677 76 aa11.27□□□□□ -0.61
CLN5-216ENST00000636780 LINC00208Q96KT6 92 aa11.27□□□□□ -0.61
CLN5-216ENST00000636780 A0A087X002 238 aa11.25□□□□□ -0.61
CLN5-216ENST00000636780 NOTCH2NLQ7Z3S9 236 aa11.25□□□□□ -0.61
CLN5-216ENST00000636780 SPINK6Q6UWN8 80 aa11.25□□□□□ -0.61
CLN5-216ENST00000636780 LCE6AA0A183 80 aa11.24□□□□□ -0.61
CLN5-216ENST00000636780 ATP5EP56381 51 aaPredicted RBP11.24□□□□□ -0.61
CLN5-216ENST00000636780 LINC00483Q53H64 154 aa11.23□□□□□ -0.61
CLN5-216ENST00000636780 IGHV6-1A0A0B4J1U7 121 aa11.22□□□□□ -0.61
CLN5-216ENST00000636780 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
CLN5-216ENST00000636780 PKHD1P08F94 4074 aa11.22□□□□□ -0.61
CLN5-216ENST00000636780 MMP24-AS1A0A0U1RRL7 71 aa11.22□□□□□ -0.61
CLN5-216ENST00000636780 IGLV7-43P04211 117 aa11.21□□□□□ -0.61
CLN5-216ENST00000636780 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
CLN5-216ENST00000636780 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
CLN5-216ENST00000636780 H0Y9P7 68 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms