RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 TMEM256-PLSCR3K7ERE1 68 aa5.78□□□□□ -1.48
CACNA1A-223ENST00000636058 SPRR1BP22528 89 aa5.78□□□□□ -1.48
CACNA1A-223ENST00000636058 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
CACNA1A-223ENST00000636058 Q8N377 158 aa5.78□□□□□ -1.48
CACNA1A-223ENST00000636058 DEFB105AQ8NG35 78 aa5.78□□□□□ -1.48
CACNA1A-223ENST00000636058 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
CACNA1A-223ENST00000636058 ZNF706Q9Y5V0 76 aaPredicted RBP5.78□□□□□ -1.48
CACNA1A-223ENST00000636058 Q5VSD8 79 aa5.77□□□□□ -1.49
CACNA1A-223ENST00000636058 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
CACNA1A-223ENST00000636058 GAGE2AQ6NT46 116 aa5.76□□□□□ -1.49
CACNA1A-223ENST00000636058 Q8N1X5 172 aa5.76□□□□□ -1.49
CACNA1A-223ENST00000636058 PCP4P48539 62 aa5.75□□□□□ -1.49
CACNA1A-223ENST00000636058 SMIM29Q86T20 159 aa5.75□□□□□ -1.49
CACNA1A-223ENST00000636058 SIGMAR1Q99720 223 aa5.75□□□□□ -1.49
CACNA1A-223ENST00000636058 SRRM2Q9UQ35 2752 aaKnown RBP5.74□□□□□ -1.49
CACNA1A-223ENST00000636058 NDUFV3P56181 108 aaKnown RBP5.74□□□□□ -1.49
CACNA1A-223ENST00000636058 C3orf22Q8N5N4 141 aa5.74□□□□□ -1.49
CACNA1A-223ENST00000636058 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
CACNA1A-223ENST00000636058 OBSCN-AS1Q96MR7 158 aa5.72□□□□□ -1.49
CACNA1A-223ENST00000636058 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
CACNA1A-223ENST00000636058 LAMTOR3Q9UHA4 124 aa5.72□□□□□ -1.49
CACNA1A-223ENST00000636058 JMJD7-PLA2G4BH0Y9G9 81 aa5.71□□□□□ -1.5
CACNA1A-223ENST00000636058 SCGB1A1P11684 91 aa5.71□□□□□ -1.5
CACNA1A-223ENST00000636058 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
CACNA1A-223ENST00000636058 IGLV8-61A0A075B6I0 122 aa5.69□□□□□ -1.5
CACNA1A-223ENST00000636058 F8WEM9 126 aa5.69□□□□□ -1.5
CACNA1A-223ENST00000636058 RBM3P98179 157 aaKnown RBP5.69□□□□□ -1.5
CACNA1A-223ENST00000636058 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
CACNA1A-223ENST00000636058 A0A087X002 238 aa5.68□□□□□ -1.5
CACNA1A-223ENST00000636058 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
CACNA1A-223ENST00000636058 A0A1B0GV72 72 aa5.68□□□□□ -1.5
CACNA1A-223ENST00000636058 HERC2O95714 4834 aa5.67□□□□□ -1.5
CACNA1A-223ENST00000636058 TRBV7-4A0A0J9YYF1 115 aa5.67□□□□□ -1.5
CACNA1A-223ENST00000636058 CRYGAP11844 174 aa5.67□□□□□ -1.5
CACNA1A-223ENST00000636058 KRTAP13-2Q52LG2 175 aa5.67□□□□□ -1.5
CACNA1A-223ENST00000636058 CDIP1Q9H305 208 aa5.67□□□□□ -1.5
CACNA1A-223ENST00000636058 LOC110117498A0A087WWA1 95 aa5.66□□□□□ -1.5
CACNA1A-223ENST00000636058 MOBPQ13875 183 aa5.66□□□□□ -1.5
CACNA1A-223ENST00000636058 C9orf153Q5TBE3 101 aa5.66□□□□□ -1.5
CACNA1A-223ENST00000636058 Q8NBF4 154 aa5.66□□□□□ -1.5
CACNA1A-223ENST00000636058 DSCR8Q96T75 97 aa5.66□□□□□ -1.5
CACNA1A-223ENST00000636058 C14orf132Q9NPU4 83 aa5.66□□□□□ -1.5
CACNA1A-223ENST00000636058 FAM240AA0A1B0GVK7 77 aa5.65□□□□□ -1.5
CACNA1A-223ENST00000636058 ACYP1P07311 99 aa5.65□□□□□ -1.5
CACNA1A-223ENST00000636058 C21orf62-AS1Q17RA5 79 aa5.65□□□□□ -1.5
CACNA1A-223ENST00000636058 Q6JHZ5 121 aa5.65□□□□□ -1.5
CACNA1A-223ENST00000636058 IGFL1Q6UW32 110 aa5.65□□□□□ -1.5
CACNA1A-223ENST00000636058 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.5
CACNA1A-223ENST00000636058 PDE6GP18545 87 aa5.64□□□□□ -1.51
CACNA1A-223ENST00000636058 Q6ZQT0 140 aa5.64□□□□□ -1.51
CACNA1A-223ENST00000636058 SSBP3-AS1Q7Z2R9 100 aa5.64□□□□□ -1.51
CACNA1A-223ENST00000636058 PRR26Q8N8Z3 221 aa5.64□□□□□ -1.51
CACNA1A-223ENST00000636058 A0A0G2JQZ4 141 aa5.63□□□□□ -1.51
CACNA1A-223ENST00000636058 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
CACNA1A-223ENST00000636058 MT-ATP8P03928 68 aa5.61□□□□□ -1.51
CACNA1A-223ENST00000636058 CCKP06307 115 aa5.61□□□□□ -1.51
CACNA1A-223ENST00000636058 TYMSOSQ8TAI1 123 aa5.61□□□□□ -1.51
CACNA1A-223ENST00000636058 Q6Q795 121 aa5.6□□□□□ -1.51
CACNA1A-223ENST00000636058 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
CACNA1A-223ENST00000636058 KRTAP10-8P60410 259 aa5.58□□□□□ -1.52
CACNA1A-223ENST00000636058 CD164Q04900 197 aa5.58□□□□□ -1.52
CACNA1A-223ENST00000636058 C4orf48Q5BLP8 95 aa5.58□□□□□ -1.52
CACNA1A-223ENST00000636058 PCLOQ9Y6V0 5065 aa5.57□□□□□ -1.52
CACNA1A-223ENST00000636058 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
CACNA1A-223ENST00000636058 A0A1B0GW54 56 aa5.57□□□□□ -1.52
CACNA1A-223ENST00000636058 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
CACNA1A-223ENST00000636058 TRBV7-7A0A0K0K1E9 115 aa5.56□□□□□ -1.52
CACNA1A-223ENST00000636058 OXTP01178 125 aa5.56□□□□□ -1.52
CACNA1A-223ENST00000636058 HRCT1Q6UXD1 115 aa5.56□□□□□ -1.52
CACNA1A-223ENST00000636058 LINC00643Q86TS7 51 aa5.55□□□□□ -1.52
CACNA1A-223ENST00000636058 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
CACNA1A-223ENST00000636058 FLG2Q5D862 2391 aaPredicted RBP5.55□□□□□ -1.52
CACNA1A-223ENST00000636058 A0A087WSZ3 146 aa5.54□□□□□ -1.52
CACNA1A-223ENST00000636058 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
CACNA1A-223ENST00000636058 SPAG11AQ6PDA7 123 aa5.54□□□□□ -1.52
CACNA1A-223ENST00000636058 MYCBP2O75592 4640 aa5.53□□□□□ -1.52
CACNA1A-223ENST00000636058 KRTAP29-1A8MX34 341 aaPredicted RBP5.53□□□□□ -1.52
CACNA1A-223ENST00000636058 SPINK1P00995 79 aa5.53□□□□□ -1.52
CACNA1A-223ENST00000636058 IMUPQ9GZP8 106 aa5.53□□□□□ -1.52
CACNA1A-223ENST00000636058 LINC00846Q9NV44 126 aa5.53□□□□□ -1.52
CACNA1A-223ENST00000636058 TNXBP22105 4242 aa5.52□□□□□ -1.53
CACNA1A-223ENST00000636058 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
CACNA1A-223ENST00000636058 Q5XG85 94 aa5.52□□□□□ -1.53
CACNA1A-223ENST00000636058 ANAPC13Q9BS18 74 aa5.5□□□□□ -1.53
CACNA1A-223ENST00000636058 SS18L2Q9UHA2 77 aa5.5□□□□□ -1.53
CACNA1A-223ENST00000636058 ASB16-AS1Q495Z4 193 aa5.49□□□□□ -1.53
CACNA1A-223ENST00000636058 Q6ZVQ6 151 aa5.49□□□□□ -1.53
CACNA1A-223ENST00000636058 LIMD2Q9BT23 127 aa5.49□□□□□ -1.53
CACNA1A-223ENST00000636058 UBL5Q9BZL1 73 aa5.49□□□□□ -1.53
CACNA1A-223ENST00000636058 NREPQ16612 68 aa5.48□□□□□ -1.53
CACNA1A-223ENST00000636058 Q96NJ1 140 aa5.47□□□□□ -1.53
CACNA1A-223ENST00000636058 LINC00472Q9H8W2 130 aa5.46□□□□□ -1.54
CACNA1A-223ENST00000636058 ATP5EP2Q5VTU8 51 aa5.45□□□□□ -1.54
CACNA1A-223ENST00000636058 C1orf195Q5TG92 126 aa5.44□□□□□ -1.54
CACNA1A-223ENST00000636058 J3QL48 77 aa5.43□□□□□ -1.54
CACNA1A-223ENST00000636058 DEFB116Q30KQ4 102 aa5.43□□□□□ -1.54
CACNA1A-223ENST00000636058 IGKV3D-7A0A0C4DH55 119 aa5.42□□□□□ -1.54
CACNA1A-223ENST00000636058 J3KT08 172 aa5.42□□□□□ -1.54
CACNA1A-223ENST00000636058 BPY2O14599 106 aa5.42□□□□□ -1.54
CACNA1A-223ENST00000636058 FAM236AA0A1B0GUQ0 79 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms