RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 C15orf56Q8N910 161 aa9.94□□□□□ -0.82
CLN8-209ENST00000635970 PRO0628Q9UI54 55 aa9.94□□□□□ -0.82
CLN8-209ENST00000635970 DNAH5Q8TE73 4624 aa9.94□□□□□ -0.82
CLN8-209ENST00000635970 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
CLN8-209ENST00000635970 KRTAP10-2P60368 255 aa9.92□□□□□ -0.82
CLN8-209ENST00000635970 DHRS4-AS1Q9P1J3 65 aa9.92□□□□□ -0.82
CLN8-209ENST00000635970 FP248Q71RG6 208 aaPredicted RBP9.92□□□□□ -0.82
CLN8-209ENST00000635970 PRYO14603 147 aa9.91□□□□□ -0.82
CLN8-209ENST00000635970 Q6ZRP5 223 aa9.91□□□□□ -0.82
CLN8-209ENST00000635970 NKAPP1Q8N9T2 125 aa9.91□□□□□ -0.82
CLN8-209ENST00000635970 PLA2G2DQ9UNK4 145 aa9.91□□□□□ -0.82
CLN8-209ENST00000635970 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
CLN8-209ENST00000635970 BIRC6Q9NR09 4857 aa9.89□□□□□ -0.83
CLN8-209ENST00000635970 TLX1NBP0CAT3 122 aa9.88□□□□□ -0.83
CLN8-209ENST00000635970 Q8N377 158 aa9.88□□□□□ -0.83
CLN8-209ENST00000635970 DYNC1H1Q14204 4646 aaKnown RBP9.87□□□□□ -0.83
CLN8-209ENST00000635970 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.86□□□□□ -0.83
CLN8-209ENST00000635970 Q8N9L7 120 aa9.85□□□□□ -0.83
CLN8-209ENST00000635970 C7orf33Q8WU49 177 aa9.84□□□□□ -0.83
CLN8-209ENST00000635970 LRP1BQ9NZR2 4599 aa9.84□□□□□ -0.83
CLN8-209ENST00000635970 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
CLN8-209ENST00000635970 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
CLN8-209ENST00000635970 Q6ZRX8 168 aa9.84□□□□□ -0.83
CLN8-209ENST00000635970 SPRR1AP35321 89 aa9.82□□□□□ -0.84
CLN8-209ENST00000635970 DEFB105AQ8NG35 78 aa9.82□□□□□ -0.84
CLN8-209ENST00000635970 SPRR4Q96PI1 79 aa9.82□□□□□ -0.84
CLN8-209ENST00000635970 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
CLN8-209ENST00000635970 KRTAP4-16G5E9R7 235 aaPredicted RBP9.81□□□□□ -0.84
CLN8-209ENST00000635970 Q8NBF4 154 aa9.81□□□□□ -0.84
CLN8-209ENST00000635970 C1orf137Q5JT78 98 aa9.8□□□□□ -0.84
CLN8-209ENST00000635970 SERTAD4-AS1Q5TG53 156 aa9.8□□□□□ -0.84
CLN8-209ENST00000635970 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
CLN8-209ENST00000635970 IGLV1-50A0A075B6I6 118 aa9.79□□□□□ -0.84
CLN8-209ENST00000635970 ETDCA0A1B0GVM5 59 aa9.79□□□□□ -0.84
CLN8-209ENST00000635970 A0A1W2PNM2 257 aa9.79□□□□□ -0.84
CLN8-209ENST00000635970 C14orf177Q52M58 125 aa9.78□□□□□ -0.84
CLN8-209ENST00000635970 HIGD2AQ9BW72 106 aa9.78□□□□□ -0.84
CLN8-209ENST00000635970 KIAA1109Q2LD37 5005 aa9.77□□□□□ -0.85
CLN8-209ENST00000635970 SMIM29Q86T20 159 aa9.77□□□□□ -0.85
CLN8-209ENST00000635970 KRTAP10-1P60331 282 aa9.76□□□□□ -0.85
CLN8-209ENST00000635970 Q9BRP9 147 aa9.76□□□□□ -0.85
CLN8-209ENST00000635970 APOBP04114 4563 aaKnown RBP9.75□□□□□ -0.85
CLN8-209ENST00000635970 FAM30AQ9NZY2 134 aa9.73□□□□□ -0.85
CLN8-209ENST00000635970 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
CLN8-209ENST00000635970 DSCR10P59022 87 aa9.72□□□□□ -0.85
CLN8-209ENST00000635970 FAM229BQ4G0N7 80 aa9.72□□□□□ -0.85
CLN8-209ENST00000635970 DNAH8Q96JB1 4490 aa9.71□□□□□ -0.85
CLN8-209ENST00000635970 RYR1P21817 5038 aa9.71□□□□□ -0.85
CLN8-209ENST00000635970 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.86
CLN8-209ENST00000635970 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
CLN8-209ENST00000635970 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
CLN8-209ENST00000635970 MRPL55Q7Z7F7 128 aaKnown RBP9.7□□□□□ -0.86
CLN8-209ENST00000635970 NDUFB1O75438 58 aa9.69□□□□□ -0.86
CLN8-209ENST00000635970 C9orf163Q8N9P6 203 aa9.68□□□□□ -0.86
CLN8-209ENST00000635970 HSPG2P98160 4391 aa9.68□□□□□ -0.86
CLN8-209ENST00000635970 ST20-AS1Q8NBB2 130 aa9.68□□□□□ -0.86
CLN8-209ENST00000635970 MPLKIPQ8TAP9 179 aa9.68□□□□□ -0.86
CLN8-209ENST00000635970 BRK1Q8WUW1 75 aa9.68□□□□□ -0.86
CLN8-209ENST00000635970 HCG22E2RYF7 251 aa9.67□□□□□ -0.86
CLN8-209ENST00000635970 CYP4F30PQ9H0H9 118 aa9.67□□□□□ -0.86
CLN8-209ENST00000635970 K7EQZ3 153 aa9.66□□□□□ -0.86
CLN8-209ENST00000635970 UBE2BP63146 152 aa9.66□□□□□ -0.86
CLN8-209ENST00000635970 Q1T7F1 81 aa9.66□□□□□ -0.86
CLN8-209ENST00000635970 REG3GQ6UW15 175 aa9.65□□□□□ -0.86
CLN8-209ENST00000635970 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
CLN8-209ENST00000635970 CDK2AP2O75956 126 aa9.64□□□□□ -0.87
CLN8-209ENST00000635970 IGLV8-61A0A075B6I0 122 aa9.63□□□□□ -0.87
CLN8-209ENST00000635970 Q6ZSA8 131 aa9.63□□□□□ -0.87
CLN8-209ENST00000635970 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
CLN8-209ENST00000635970 HERC2O95714 4834 aa9.63□□□□□ -0.87
CLN8-209ENST00000635970 PANO1I0J062 215 aa9.63□□□□□ -0.87
CLN8-209ENST00000635970 C1orf64Q8NEQ6 169 aa9.63□□□□□ -0.87
CLN8-209ENST00000635970 CHTF8P0CG12 524 aa9.61□□□□□ -0.87
CLN8-209ENST00000635970 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.61□□□□□ -0.87
CLN8-209ENST00000635970 MP68P56378 58 aa9.59□□□□□ -0.87
CLN8-209ENST00000635970 KRTAP17-1Q9BYP8 105 aa9.59□□□□□ -0.87
CLN8-209ENST00000635970 H3BPC8 53 aa9.59□□□□□ -0.87
CLN8-209ENST00000635970 A0A096LNI7 61 aa9.58□□□□□ -0.88
CLN8-209ENST00000635970 IGKV2-24A0A0C4DH68 120 aa9.58□□□□□ -0.88
CLN8-209ENST00000635970 IGFL1Q6UW32 110 aa9.58□□□□□ -0.88
CLN8-209ENST00000635970 V9GYY9 64 aa9.58□□□□□ -0.88
CLN8-209ENST00000635970 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
CLN8-209ENST00000635970 CIRBP-AS1Q8TBR5 109 aa9.56□□□□□ -0.88
CLN8-209ENST00000635970 SMR3BP02814 79 aaPredicted RBP9.55□□□□□ -0.88
CLN8-209ENST00000635970 SPACA4Q8TDM5 124 aa9.55□□□□□ -0.88
CLN8-209ENST00000635970 C1orf195Q5TG92 126 aa9.55□□□□□ -0.88
CLN8-209ENST00000635970 PRR15Q8IV56 129 aa9.54□□□□□ -0.88
CLN8-209ENST00000635970 FAT1Q14517 4588 aa9.54□□□□□ -0.88
CLN8-209ENST00000635970 SPANXA2-OT1Q8N9U9 137 aa9.54□□□□□ -0.88
CLN8-209ENST00000635970 TRAV22A0A0B4J277 110 aa9.52□□□□□ -0.89
CLN8-209ENST00000635970 KRTAP29-1A8MX34 341 aaPredicted RBP9.51□□□□□ -0.89
CLN8-209ENST00000635970 A0A087WSZ3 146 aa9.5□□□□□ -0.89
CLN8-209ENST00000635970 H0Y9J4 135 aa9.5□□□□□ -0.89
CLN8-209ENST00000635970 SPRR1BP22528 89 aa9.49□□□□□ -0.89
CLN8-209ENST00000635970 Q8N1X5 172 aa9.49□□□□□ -0.89
CLN8-209ENST00000635970 KRTAP4-5Q9BYR2 181 aa9.48□□□□□ -0.89
CLN8-209ENST00000635970 UBE2AP49459 152 aa9.48□□□□□ -0.89
CLN8-209ENST00000635970 WFDC13Q8IUB5 93 aa9.48□□□□□ -0.89
CLN8-209ENST00000635970 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
CLN8-209ENST00000635970 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms