RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZNF73O43830 326 aaPredicted RBP1.16□□□□□ -2.22
SMARCB1-208ENST00000634926 IFI27P40305 119 aaPredicted RBP1.16□□□□□ -2.22
SMARCB1-208ENST00000634926 ALKAL2Q6UX46 152 aa1.16□□□□□ -2.22
SMARCB1-208ENST00000634926 DAND5Q8N907 189 aa1.16□□□□□ -2.22
SMARCB1-208ENST00000634926 BORCS7Q96B45 105 aa1.16□□□□□ -2.22
SMARCB1-208ENST00000634926 C20orf166-AS1Q96NR2 134 aa1.16□□□□□ -2.22
SMARCB1-208ENST00000634926 SPRR4Q96PI1 79 aa1.16□□□□□ -2.22
SMARCB1-208ENST00000634926 TMEM238C9JI98 176 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 F8W036 122 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 LST1O00453 97 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 IGLC3P0DOY3 106 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 ADCYAP1P18509 176 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 CKS2P33552 79 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 PRLHP81277 87 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 IFITM2Q01629 132 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 FABP9Q0Z7S8 132 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 PMAIP1Q13794 54 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 MRPL54Q6P161 138 aaKnown RBP1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 SPAG11AQ6PDA7 123 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 C2orf91Q6ZV80 131 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 Q8N8P6 123 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 SMCR5Q8TEV8 140 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 TOMM6Q96B49 74 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 ZNF625Q96I27 306 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 PRELID3AQ96N28 172 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 MIEN1Q9BRT3 115 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 C2orf88Q9BSF0 95 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 NAT8Q9UHE5 227 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 CYSLTR1Q9Y271 337 aa1.15□□□□□ -2.23
SMARCB1-208ENST00000634926 IGKV2D-26A0A0A0MRZ7 120 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 SPINK1P00995 79 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 S100A8P05109 93 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 CKS1BP61024 79 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 SEC11AP67812 179 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 COX17Q14061 63 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 ADIRFQ15847 76 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 COX7B2Q8TF08 81 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 Q9BRP9 147 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 KCNQ1DNQ9H478 68 aa1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 NXT2Q9NPJ8 142 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-208ENST00000634926 LOC107984156A0A0G2JMH3 177 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 C11orf86A6NJI1 115 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 A8MUN3 132 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 ERC2-IT1O76042 136 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 SPINK8P0C7L1 97 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 AKAP14Q86UN6 197 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 ARL17AQ8IVW1 177 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 FAM19A2Q8N3H0 131 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 CST9LQ9H4G1 147 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 TOMM7Q9P0U1 55 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 ERG28Q9UKR5 140 aa1.13□□□□□ -2.23
SMARCB1-208ENST00000634926 TRAV9-1A0A075B6T8 112 aa1.12□□□□□ -2.23
SMARCB1-208ENST00000634926 LINC01549A6NIU2 74 aa1.12□□□□□ -2.23
SMARCB1-208ENST00000634926 Q5XG85 94 aa1.12□□□□□ -2.23
SMARCB1-208ENST00000634926 SFTA2Q6UW10 78 aa1.12□□□□□ -2.23
SMARCB1-208ENST00000634926 Q6ZRX8 168 aa1.12□□□□□ -2.23
SMARCB1-208ENST00000634926 TTTY13Q9BZ97 58 aa1.12□□□□□ -2.23
SMARCB1-208ENST00000634926 SPRR1BP22528 89 aa1.11□□□□□ -2.23
SMARCB1-208ENST00000634926 G0S2P27469 103 aa1.11□□□□□ -2.23
SMARCB1-208ENST00000634926 RPL37P61927 97 aaKnown RBP1.11□□□□□ -2.23
SMARCB1-208ENST00000634926 PEA15Q15121 130 aa1.11□□□□□ -2.23
SMARCB1-208ENST00000634926 PCOTHQ58A44 107 aa1.11□□□□□ -2.23
SMARCB1-208ENST00000634926 SSBP3-AS1Q7Z2R9 100 aa1.11□□□□□ -2.23
SMARCB1-208ENST00000634926 SCGB3A1Q96QR1 104 aa1.11□□□□□ -2.23
SMARCB1-208ENST00000634926 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
SMARCB1-208ENST00000634926 TRAV12-1A0A0B4J245 112 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 TRBV10-3A0A0K0K1G6 114 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 TRBV10-2A0A0K0K1G8 114 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 A0A1B0GVG6 124 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 H3BRM9 83 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 NCR3O14931 201 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 MT2AP02795 61 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 MT1FP04733 61 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 RAB14P61106 215 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 C18orf32Q8TCD1 76 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 ZCCHC13Q8WW36 166 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 NDUFA12Q9UI09 145 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 NEBP20929 6669 aa1.1□□□□□ -2.23
SMARCB1-208ENST00000634926 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.23
SMARCB1-208ENST00000634926 LEPROTO15243 131 aa1.09□□□□□ -2.23
SMARCB1-208ENST00000634926 NDUFC2O95298 119 aa1.09□□□□□ -2.23
SMARCB1-208ENST00000634926 HBDP02042 147 aa1.09□□□□□ -2.23
SMARCB1-208ENST00000634926 MT-ND4LP03901 98 aa1.09□□□□□ -2.23
SMARCB1-208ENST00000634926 SMIM13P0DJ93 91 aa1.09□□□□□ -2.23
SMARCB1-208ENST00000634926 SOSTDC1Q6X4U4 206 aa1.09□□□□□ -2.23
SMARCB1-208ENST00000634926 PRO2289Q9P1D8 64 aa1.09□□□□□ -2.23
SMARCB1-208ENST00000634926 IGLV5-48A0A075B6I7 105 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 TRAV23DV6A0A075B6W5 121 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 ETDCA0A1B0GVM5 59 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 TMEM218A2RU14 115 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST1H2BOP23527 126 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST1H2BBP33778 126 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST1H2BDP58876 126 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST1H4AP62805 103 aaKnown RBP1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST1H2BCP62807 126 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 PMCHL1Q16048 86 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 HIST2H2BEQ16778 126 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 KRTAP6-3Q3LI67 103 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 KRTAP19-6Q3LI70 58 aa1.08□□□□□ -2.24
SMARCB1-208ENST00000634926 CLLU1Q5K131 121 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms