RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.99□□□□□ -0.49
PTBP1-220ENST00000627714 A0A087WSZ3 146 aa11.99□□□□□ -0.49
PTBP1-220ENST00000627714 COL6A5A8TX70 2615 aa11.97□□□□□ -0.49
PTBP1-220ENST00000627714 A0A0G2JQZ4 141 aa11.96□□□□□ -0.49
PTBP1-220ENST00000627714 PHF5AQ7RTV0 110 aaKnown RBP11.96□□□□□ -0.49
PTBP1-220ENST00000627714 ZCCHC13Q8WW36 166 aaKnown RBP11.96□□□□□ -0.49
PTBP1-220ENST00000627714 C9orf163Q8N9P6 203 aa11.96□□□□□ -0.49
PTBP1-220ENST00000627714 LINC00474Q9P2X8 69 aa11.95□□□□□ -0.5
PTBP1-220ENST00000627714 CHTF8P0CG12 524 aa11.94□□□□□ -0.5
PTBP1-220ENST00000627714 KRTAP11-1Q8IUC1 163 aa11.91□□□□□ -0.5
PTBP1-220ENST00000627714 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
PTBP1-220ENST00000627714 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
PTBP1-220ENST00000627714 DEFB116Q30KQ4 102 aa11.89□□□□□ -0.51
PTBP1-220ENST00000627714 DNAH10Q8IVF4 4471 aa11.89□□□□□ -0.51
PTBP1-220ENST00000627714 STAB2Q8WWQ8 2551 aa11.87□□□□□ -0.51
PTBP1-220ENST00000627714 NBDYA0A0U1RRE5 68 aa11.87□□□□□ -0.51
PTBP1-220ENST00000627714 NDUFB1O75438 58 aa11.87□□□□□ -0.51
PTBP1-220ENST00000627714 WFDC13Q8IUB5 93 aa11.86□□□□□ -0.51
PTBP1-220ENST00000627714 MP68P56378 58 aa11.86□□□□□ -0.51
PTBP1-220ENST00000627714 KRTAP29-1A8MX34 341 aaPredicted RBP11.85□□□□□ -0.51
PTBP1-220ENST00000627714 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
PTBP1-220ENST00000627714 PRR15Q8IV56 129 aa11.84□□□□□ -0.51
PTBP1-220ENST00000627714 DNAH9Q9NYC9 4486 aa11.84□□□□□ -0.51
PTBP1-220ENST00000627714 MGAM2Q2M2H8 2515 aa11.84□□□□□ -0.51
PTBP1-220ENST00000627714 DYNC2H1Q8NCM8 4307 aaKnown RBP11.84□□□□□ -0.51
PTBP1-220ENST00000627714 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
PTBP1-220ENST00000627714 A8MWP4 228 aa11.83□□□□□ -0.52
PTBP1-220ENST00000627714 LINC00472Q9H8W2 130 aa11.83□□□□□ -0.52
PTBP1-220ENST00000627714 hDV103S1A0JD37 113 aa11.83□□□□□ -0.52
PTBP1-220ENST00000627714 KRTAP13-1Q8IUC0 172 aa11.83□□□□□ -0.52
PTBP1-220ENST00000627714 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
PTBP1-220ENST00000627714 Q6ZRN7 208 aaPredicted RBP11.82□□□□□ -0.52
PTBP1-220ENST00000627714 CASC2Q6XLA1 102 aa11.81□□□□□ -0.52
PTBP1-220ENST00000627714 CYP4F30PQ9H0H9 118 aa11.81□□□□□ -0.52
PTBP1-220ENST00000627714 LYSTQ99698 3801 aa11.81□□□□□ -0.52
PTBP1-220ENST00000627714 LINC00336Q6ZUF6 198 aa11.8□□□□□ -0.52
PTBP1-220ENST00000627714 COL7A1Q02388 2944 aa11.8□□□□□ -0.52
PTBP1-220ENST00000627714 H3BPC8 53 aa11.8□□□□□ -0.52
PTBP1-220ENST00000627714 PRO0628Q9UI54 55 aa11.79□□□□□ -0.52
PTBP1-220ENST00000627714 MDFIQ99750 246 aa11.79□□□□□ -0.52
PTBP1-220ENST00000627714 C1orf64Q8NEQ6 169 aa11.77□□□□□ -0.53
PTBP1-220ENST00000627714 MPLKIPQ8TAP9 179 aa11.76□□□□□ -0.53
PTBP1-220ENST00000627714 TRAV22A0A0B4J277 110 aa11.76□□□□□ -0.53
PTBP1-220ENST00000627714 SPACA4Q8TDM5 124 aa11.75□□□□□ -0.53
PTBP1-220ENST00000627714 PANO1I0J062 215 aa11.75□□□□□ -0.53
PTBP1-220ENST00000627714 LINC00208Q96KT6 92 aa11.73□□□□□ -0.53
PTBP1-220ENST00000627714 H0Y9P7 68 aa11.72□□□□□ -0.53
PTBP1-220ENST00000627714 LINC00483Q53H64 154 aa11.7□□□□□ -0.54
PTBP1-220ENST00000627714 SPANXA2-OT1Q8N9U9 137 aa11.7□□□□□ -0.54
PTBP1-220ENST00000627714 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
PTBP1-220ENST00000627714 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.69□□□□□ -0.54
PTBP1-220ENST00000627714 Q1T7F1 81 aa11.68□□□□□ -0.54
PTBP1-220ENST00000627714 MMP24-AS1A0A0U1RRL7 71 aa11.67□□□□□ -0.54
PTBP1-220ENST00000627714 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
PTBP1-220ENST00000627714 A0A087WTM6 91 aa11.65□□□□□ -0.54
PTBP1-220ENST00000627714 IGLV9-49A0A0B4J1Y8 123 aa11.64□□□□□ -0.55
PTBP1-220ENST00000627714 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
PTBP1-220ENST00000627714 CSMD3Q7Z407 3707 aa11.64□□□□□ -0.55
PTBP1-220ENST00000627714 PRR4Q16378 134 aa11.63□□□□□ -0.55
PTBP1-220ENST00000627714 TENM2Q9NT68 2774 aa11.62□□□□□ -0.55
PTBP1-220ENST00000627714 MOBPQ13875 183 aa11.62□□□□□ -0.55
PTBP1-220ENST00000627714 PLECQ15149 4684 aaKnown RBP11.62□□□□□ -0.55
PTBP1-220ENST00000627714 Q96NJ1 140 aa11.62□□□□□ -0.55
PTBP1-220ENST00000627714 BRK1Q8WUW1 75 aa11.62□□□□□ -0.55
PTBP1-220ENST00000627714 ASB16-AS1Q495Z4 193 aa11.6□□□□□ -0.55
PTBP1-220ENST00000627714 TP53AIP1Q9HCN2 124 aa11.6□□□□□ -0.55
PTBP1-220ENST00000627714 IGLV5-52A0A0A0MRZ9 124 aa11.59□□□□□ -0.55
PTBP1-220ENST00000627714 RTL8CO15255 209 aa11.59□□□□□ -0.55
PTBP1-220ENST00000627714 WWC2-AS2Q96NR7 200 aa11.57□□□□□ -0.56
PTBP1-220ENST00000627714 V9GYY9 64 aa11.57□□□□□ -0.56
PTBP1-220ENST00000627714 PLAC8Q9NZF1 115 aa11.56□□□□□ -0.56
PTBP1-220ENST00000627714 PSORS1C2Q9UIG4 136 aa11.56□□□□□ -0.56
PTBP1-220ENST00000627714 C8orf17Q9NRJ1 99 aa11.55□□□□□ -0.56
PTBP1-220ENST00000627714 ZNF861PO60384 105 aa11.54□□□□□ -0.56
PTBP1-220ENST00000627714 VPS13DQ5THJ4 4388 aa11.54□□□□□ -0.56
PTBP1-220ENST00000627714 A0A1B0GVX0 72 aa11.52□□□□□ -0.57
PTBP1-220ENST00000627714 Q6ZR54 194 aa11.51□□□□□ -0.57
PTBP1-220ENST00000627714 CDK2AP2O75956 126 aa11.51□□□□□ -0.57
PTBP1-220ENST00000627714 IGLV7-46A0A075B6I9 117 aa11.48□□□□□ -0.57
PTBP1-220ENST00000627714 IGHV6-1A0A0B4J1U7 121 aa11.46□□□□□ -0.57
PTBP1-220ENST00000627714 C1orf195Q5TG92 126 aa11.45□□□□□ -0.58
PTBP1-220ENST00000627714 MRPL34Q9BQ48 92 aaKnown RBP11.44□□□□□ -0.58
PTBP1-220ENST00000627714 STARD9Q9P2P6 4700 aa11.43□□□□□ -0.58
PTBP1-220ENST00000627714 PSPHP1O15172 72 aa11.43□□□□□ -0.58
PTBP1-220ENST00000627714 HECTD4Q9Y4D8 3996 aa11.42□□□□□ -0.58
PTBP1-220ENST00000627714 LIMD2Q9BT23 127 aa11.41□□□□□ -0.58
PTBP1-220ENST00000627714 PRKDCP78527 4128 aaKnown RBP11.41□□□□□ -0.58
PTBP1-220ENST00000627714 ANAPC11Q9NYG5 84 aa11.4□□□□□ -0.58
PTBP1-220ENST00000627714 NDUFS5O43920 106 aa11.4□□□□□ -0.58
PTBP1-220ENST00000627714 C1orf134Q5TEV5 83 aa11.4□□□□□ -0.58
PTBP1-220ENST00000627714 IGLV7-43P04211 117 aa11.39□□□□□ -0.59
PTBP1-220ENST00000627714 Q8N9P0 234 aaPredicted RBP11.38□□□□□ -0.59
PTBP1-220ENST00000627714 DNAH17Q9UFH2 4485 aa11.37□□□□□ -0.59
PTBP1-220ENST00000627714 COA5Q86WW8 74 aa11.37□□□□□ -0.59
PTBP1-220ENST00000627714 A8MUN3 132 aa11.36□□□□□ -0.59
PTBP1-220ENST00000627714 CD164Q04900 197 aa11.36□□□□□ -0.59
PTBP1-220ENST00000627714 PCOTHQ58A44 107 aa11.36□□□□□ -0.59
PTBP1-220ENST00000627714 DNAH8Q96JB1 4490 aa11.33□□□□□ -0.6
PTBP1-220ENST00000627714 Q5VV11 94 aa11.32□□□□□ -0.6
PTBP1-220ENST00000627714 SSBP3-AS1Q7Z2R9 100 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms