RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 IGKV3D-7A0A0C4DH55 119 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 IGKV2-29A2NJV5 120 aaPredicted RBP1.23□□□□□ -2.21
SCN8A-210ENST00000627665 C9JAW5 83 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 H3BVH4 76 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 J3QR89 54 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 UQCRQO14949 82 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 ARPC5O15511 151 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 KRTAP2-3P0C7H8 128 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 SLC25A6P12236 298 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 ZNF56Q15929 161 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 IQCJQ1A5X6 159 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 PCOTHQ58A44 107 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 SPAG11AQ6PDA7 123 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 GGACTQ9BVM4 153 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 KRTAP2-4Q9BYR9 128 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 NDUFA12Q9UI09 145 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 HSPB8Q9UJY1 196 aa1.23□□□□□ -2.21
SCN8A-210ENST00000627665 F8W1H4 67 aa1.22□□□□□ -2.21
SCN8A-210ENST00000627665 H3BRM9 83 aa1.22□□□□□ -2.21
SCN8A-210ENST00000627665 SSSCA1O60232 199 aa1.22□□□□□ -2.21
SCN8A-210ENST00000627665 NUPR1O60356 82 aa1.22□□□□□ -2.21
SCN8A-210ENST00000627665 COX7CP15954 63 aa1.22□□□□□ -2.21
SCN8A-210ENST00000627665 LCE3AQ5TA76 89 aa1.22□□□□□ -2.21
SCN8A-210ENST00000627665 TMEM14EPQ6UXP3 125 aa1.22□□□□□ -2.21
SCN8A-210ENST00000627665 HBDP02042 147 aa1.21□□□□□ -2.22
SCN8A-210ENST00000627665 ARMS2P0C7Q2 107 aa1.21□□□□□ -2.22
SCN8A-210ENST00000627665 UBE2L3P68036 154 aaKnown RBP1.21□□□□□ -2.22
SCN8A-210ENST00000627665 KRTAP13-4Q3LI77 160 aa1.21□□□□□ -2.22
SCN8A-210ENST00000627665 CASC2Q6XLA1 102 aa1.21□□□□□ -2.22
SCN8A-210ENST00000627665 FAM19A2Q8N3H0 131 aa1.21□□□□□ -2.22
SCN8A-210ENST00000627665 CLEC2BQ92478 149 aa1.21□□□□□ -2.22
SCN8A-210ENST00000627665 ZNF625Q96I27 306 aaPredicted RBP1.21□□□□□ -2.22
SCN8A-210ENST00000627665 FAM167A-AS1Q96KT0 104 aa1.21□□□□□ -2.22
SCN8A-210ENST00000627665 KMT2DO14686 5537 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 UBE2L5PA0A1B0GUS4 154 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 FAM25AB3EWG3 89 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 FAM25CB3EWG5 89 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 FAM25GB3EWG6 89 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 CCL25O15444 150 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 BCE1O60756 84 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 FGF7P21781 194 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 CKS2P33552 79 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 FOXA3P55318 350 aaPredicted RBP1.2□□□□□ -2.22
SCN8A-210ENST00000627665 UNQ6190/PRO20217Q6UXQ8 127 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 CDC42SE1Q9NRR8 79 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 SCP2D1Q9UJQ7 156 aa1.2□□□□□ -2.22
SCN8A-210ENST00000627665 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 LINC00959A0A1B0GUT2 108 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 SFT2D2O95562 160 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 SPINK1P00995 79 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 MT2AP02795 61 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 MT1FP04733 61 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 AKAIN1P0CW23 69 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 NCS1P62166 190 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 SSBP1Q04837 148 aaKnown RBP1.19□□□□□ -2.22
SCN8A-210ENST00000627665 SPAG11BQ08648 103 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 SMIM7Q9BQ49 75 aa1.19□□□□□ -2.22
SCN8A-210ENST00000627665 MRPL35Q9NZE8 188 aaKnown RBP1.19□□□□□ -2.22
SCN8A-210ENST00000627665 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.18□□□□□ -2.22
SCN8A-210ENST00000627665 C9orf170A2RU37 121 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 M0QY20 66 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 INE1O15225 51 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 NDUFA1O15239 70 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 NCR2O95944 276 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 MT-ND4LP03901 98 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 TCRAP04437 139 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 MGPP08493 103 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 ZNF25P17030 456 aaPredicted RBP1.18□□□□□ -2.22
SCN8A-210ENST00000627665 MRPS10P82664 201 aaKnown RBP1.18□□□□□ -2.22
SCN8A-210ENST00000627665 SPANXN1Q5VSR9 72 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 LINC00299Q6ZSB3 139 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 C5orf17Q8NAS9 161 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 SMIM3Q9BZL3 60 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 TNFSF18Q9UNG2 199 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 C22orf24Q9Y442 160 aa1.18□□□□□ -2.22
SCN8A-210ENST00000627665 LOC110117498A0A087WWA1 95 aa1.17□□□□□ -2.22
SCN8A-210ENST00000627665 C9orf92A6NGG3 77 aa1.17□□□□□ -2.22
SCN8A-210ENST00000627665 DNAL4O96015 105 aa1.17□□□□□ -2.22
SCN8A-210ENST00000627665 RPS29P62273 56 aaKnown RBP1.17□□□□□ -2.22
SCN8A-210ENST00000627665 C5orf38Q86SI9 138 aa1.17□□□□□ -2.22
SCN8A-210ENST00000627665 SMIM4Q8WVI0 70 aa1.17□□□□□ -2.22
SCN8A-210ENST00000627665 NIT2Q9NQR4 276 aa1.17□□□□□ -2.22
SCN8A-210ENST00000627665 C6orf48Q9UBA6 75 aa1.17□□□□□ -2.22
SCN8A-210ENST00000627665 ARL2-SNX15V9GYD0 113 aa1.17□□□□□ -2.22
SCN8A-210ENST00000627665 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 LOC107984156A0A0G2JMH3 177 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 FAUP35544 74 aaKnown RBP1.16□□□□□ -2.22
SCN8A-210ENST00000627665 CRIP1P50238 77 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 PRLHP81277 87 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 MIR22HGQ0VDD5 57 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 KRTAP13-1Q8IUC0 172 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 ARL17AQ8IVW1 177 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 ATOH7Q8N100 152 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 VPS25Q9BRG1 176 aa1.16□□□□□ -2.22
SCN8A-210ENST00000627665 TRBV30A0A0K0K1B3 111 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 C20orf202A1L168 122 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 ZNF727A8MUV8 499 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 K7ERU9 68 aa1.15□□□□□ -2.23
SCN8A-210ENST00000627665 AKR1D1P51857 326 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms