RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 RBM3P98179 157 aaKnown RBP11.81□□□□□ -0.52
CNOT9-209ENST00000627282 Q9BRP9 147 aa11.8□□□□□ -0.52
CNOT9-209ENST00000627282 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
CNOT9-209ENST00000627282 SCGB1A1P11684 91 aa11.78□□□□□ -0.52
CNOT9-209ENST00000627282 LOC110117498A0A087WWA1 95 aa11.78□□□□□ -0.52
CNOT9-209ENST00000627282 NDUFV3P56181 108 aaKnown RBP11.77□□□□□ -0.53
CNOT9-209ENST00000627282 UBE2BP63146 152 aa11.76□□□□□ -0.53
CNOT9-209ENST00000627282 SMCR5Q8TEV8 140 aa11.75□□□□□ -0.53
CNOT9-209ENST00000627282 PSORS1C2Q9UIG4 136 aa11.75□□□□□ -0.53
CNOT9-209ENST00000627282 LINC01547P58512 204 aaPredicted RBP11.75□□□□□ -0.53
CNOT9-209ENST00000627282 Q6ZQT0 140 aa11.75□□□□□ -0.53
CNOT9-209ENST00000627282 PDE6GP18545 87 aa11.74□□□□□ -0.53
CNOT9-209ENST00000627282 PCP4P48539 62 aa11.74□□□□□ -0.53
CNOT9-209ENST00000627282 LINC00643Q86TS7 51 aa11.74□□□□□ -0.53
CNOT9-209ENST00000627282 Q8N377 158 aa11.74□□□□□ -0.53
CNOT9-209ENST00000627282 DSCR8Q96T75 97 aa11.74□□□□□ -0.53
CNOT9-209ENST00000627282 LINC00846Q9NV44 126 aa11.72□□□□□ -0.53
CNOT9-209ENST00000627282 FAM19A1Q7Z5A9 133 aa11.71□□□□□ -0.53
CNOT9-209ENST00000627282 IGLV5-48A0A075B6I7 105 aa11.71□□□□□ -0.54
CNOT9-209ENST00000627282 TRBV7-4A0A0J9YYF1 115 aa11.71□□□□□ -0.54
CNOT9-209ENST00000627282 ERC2-IT1O76042 136 aa11.71□□□□□ -0.54
CNOT9-209ENST00000627282 DEFB105AQ8NG35 78 aa11.71□□□□□ -0.54
CNOT9-209ENST00000627282 ST20-AS1Q8NBB2 130 aa11.69□□□□□ -0.54
CNOT9-209ENST00000627282 PKHD1L1Q86WI1 4243 aa11.69□□□□□ -0.54
CNOT9-209ENST00000627282 C1orf137Q5JT78 98 aa11.68□□□□□ -0.54
CNOT9-209ENST00000627282 Q6Q795 121 aa11.68□□□□□ -0.54
CNOT9-209ENST00000627282 C21orf62-AS1Q17RA5 79 aa11.68□□□□□ -0.54
CNOT9-209ENST00000627282 H0Y9J4 135 aa11.67□□□□□ -0.54
CNOT9-209ENST00000627282 TRBV7-7A0A0K0K1E9 115 aa11.66□□□□□ -0.54
CNOT9-209ENST00000627282 PRLHP81277 87 aa11.66□□□□□ -0.54
CNOT9-209ENST00000627282 HERC1Q15751 4861 aa11.65□□□□□ -0.54
CNOT9-209ENST00000627282 KRTAP29-1A8MX34 341 aaPredicted RBP11.64□□□□□ -0.55
CNOT9-209ENST00000627282 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
CNOT9-209ENST00000627282 IMUPQ9GZP8 106 aa11.63□□□□□ -0.55
CNOT9-209ENST00000627282 J3QL48 77 aa11.62□□□□□ -0.55
CNOT9-209ENST00000627282 Q6JHZ5 121 aa11.62□□□□□ -0.55
CNOT9-209ENST00000627282 BCE1O60756 84 aa11.61□□□□□ -0.55
CNOT9-209ENST00000627282 HIGD2AQ9BW72 106 aa11.6□□□□□ -0.55
CNOT9-209ENST00000627282 LRP1Q07954 4544 aaKnown RBP11.59□□□□□ -0.55
CNOT9-209ENST00000627282 C3orf22Q8N5N4 141 aa11.59□□□□□ -0.55
CNOT9-209ENST00000627282 UBL5Q9BZL1 73 aa11.59□□□□□ -0.55
CNOT9-209ENST00000627282 OXTP01178 125 aa11.58□□□□□ -0.56
CNOT9-209ENST00000627282 UBE2AP49459 152 aa11.58□□□□□ -0.56
CNOT9-209ENST00000627282 SMIM29Q86T20 159 aa11.58□□□□□ -0.56
CNOT9-209ENST00000627282 KRTAP13-1Q8IUC0 172 aa11.57□□□□□ -0.56
CNOT9-209ENST00000627282 ZNF861PO60384 105 aa11.55□□□□□ -0.56
CNOT9-209ENST00000627282 SPINK6Q6UWN8 80 aa11.55□□□□□ -0.56
CNOT9-209ENST00000627282 IGKV3D-7A0A0C4DH55 119 aa11.54□□□□□ -0.56
CNOT9-209ENST00000627282 SPRR1BP22528 89 aa11.53□□□□□ -0.56
CNOT9-209ENST00000627282 ATP5EP2Q5VTU8 51 aa11.53□□□□□ -0.56
CNOT9-209ENST00000627282 F8WEM9 126 aa11.51□□□□□ -0.57
CNOT9-209ENST00000627282 Q6ZVQ6 151 aa11.51□□□□□ -0.57
CNOT9-209ENST00000627282 FAT3Q8TDW7 4589 aa11.5□□□□□ -0.57
CNOT9-209ENST00000627282 A0A1B0GW54 56 aa11.49□□□□□ -0.57
CNOT9-209ENST00000627282 IGLV8-61A0A075B6I0 122 aa11.49□□□□□ -0.57
CNOT9-209ENST00000627282 A0A1W2PNM2 257 aa11.48□□□□□ -0.57
CNOT9-209ENST00000627282 Q8NBF4 154 aa11.46□□□□□ -0.58
CNOT9-209ENST00000627282 SPRR4Q96PI1 79 aa11.44□□□□□ -0.58
CNOT9-209ENST00000627282 FAM236AA0A1B0GUQ0 79 aa11.42□□□□□ -0.58
CNOT9-209ENST00000627282 FAM236BA0A1B0GV22 79 aa11.42□□□□□ -0.58
CNOT9-209ENST00000627282 MT1HL1P0DM35 61 aa11.42□□□□□ -0.58
CNOT9-209ENST00000627282 CXCL6P80162 114 aa11.42□□□□□ -0.58
CNOT9-209ENST00000627282 IGFL1Q6UW32 110 aa11.42□□□□□ -0.58
CNOT9-209ENST00000627282 KRTAP1-4P0C5Y4 121 aa11.41□□□□□ -0.58
CNOT9-209ENST00000627282 NREPQ16612 68 aa11.41□□□□□ -0.58
CNOT9-209ENST00000627282 ANAPC13Q9BS18 74 aa11.41□□□□□ -0.58
CNOT9-209ENST00000627282 CRYGAP11844 174 aa11.38□□□□□ -0.59
CNOT9-209ENST00000627282 HIST1H4AP62805 103 aaKnown RBP11.38□□□□□ -0.59
CNOT9-209ENST00000627282 ZNF706Q9Y5V0 76 aaPredicted RBP11.38□□□□□ -0.59
CNOT9-209ENST00000627282 A0A087WVE0 104 aa11.37□□□□□ -0.59
CNOT9-209ENST00000627282 LINC00483Q53H64 154 aa11.37□□□□□ -0.59
CNOT9-209ENST00000627282 TNXBP22105 4242 aa11.37□□□□□ -0.59
CNOT9-209ENST00000627282 A0A0G2JQZ4 141 aa11.35□□□□□ -0.59
CNOT9-209ENST00000627282 ANAPC11Q9NYG5 84 aa11.34□□□□□ -0.59
CNOT9-209ENST00000627282 PRR26Q8N8Z3 221 aa11.3□□□□□ -0.6
CNOT9-209ENST00000627282 ATOX1O00244 68 aa11.29□□□□□ -0.6
CNOT9-209ENST00000627282 BPY2O14599 106 aa11.29□□□□□ -0.6
CNOT9-209ENST00000627282 A0A087X002 238 aa11.28□□□□□ -0.6
CNOT9-209ENST00000627282 KRTAP10-8P60410 259 aa11.27□□□□□ -0.6
CNOT9-209ENST00000627282 FAM229BQ4G0N7 80 aa11.25□□□□□ -0.61
CNOT9-209ENST00000627282 A0A087WSZ3 146 aa11.24□□□□□ -0.61
CNOT9-209ENST00000627282 IGLV9-49A0A0B4J1Y8 123 aa11.24□□□□□ -0.61
CNOT9-209ENST00000627282 C9orf153Q5TBE3 101 aa11.24□□□□□ -0.61
CNOT9-209ENST00000627282 KRTAP13-2Q52LG2 175 aa11.23□□□□□ -0.61
CNOT9-209ENST00000627282 HMCN2Q8NDA2 5059 aa11.23□□□□□ -0.61
CNOT9-209ENST00000627282 IGKV4-1P06312 121 aa11.22□□□□□ -0.61
CNOT9-209ENST00000627282 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
CNOT9-209ENST00000627282 Q8N9L7 120 aa11.19□□□□□ -0.62
CNOT9-209ENST00000627282 CCDC179H3BU77 68 aa11.18□□□□□ -0.62
CNOT9-209ENST00000627282 DSCR10P59022 87 aa11.17□□□□□ -0.62
CNOT9-209ENST00000627282 MOBPQ13875 183 aa11.17□□□□□ -0.62
CNOT9-209ENST00000627282 TYMSOSQ8TAI1 123 aa11.16□□□□□ -0.62
CNOT9-209ENST00000627282 COX7CP15954 63 aa11.15□□□□□ -0.62
CNOT9-209ENST00000627282 UQCRQO14949 82 aa11.14□□□□□ -0.63
CNOT9-209ENST00000627282 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
CNOT9-209ENST00000627282 LINC00472Q9H8W2 130 aa11.11□□□□□ -0.63
CNOT9-209ENST00000627282 SMIM20Q8N5G0 67 aa11.1□□□□□ -0.63
CNOT9-209ENST00000627282 DEFB116Q30KQ4 102 aa11.09□□□□□ -0.63
CNOT9-209ENST00000627282 K7EQZ3 153 aa11.09□□□□□ -0.63
CNOT9-209ENST00000627282 SSBP3-AS1Q7Z2R9 100 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms