RNA–Protein interactions for RNA: ENST00000626631.1

TCF4-256, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-256	ENST00000626631	SCGB1D4	Q6XE38	83 aa		4.18	□□□□□ -1.74
TCF4-256	ENST00000626631	ELOF1	P60002	83 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-256	ENST00000626631	ANKRD39	Q53RE8	183 aa		4.17	□□□□□ -1.74
TCF4-256	ENST00000626631	C1orf195	Q5TG92	126 aa		4.17	□□□□□ -1.74
TCF4-256	ENST00000626631	LINC00518	Q8N0U6	118 aa		4.17	□□□□□ -1.74
TCF4-256	ENST00000626631	ATOH7	Q8N100	152 aa		4.17	□□□□□ -1.74
TCF4-256	ENST00000626631	DHRS4-AS1	Q9P1J3	65 aa		4.17	□□□□□ -1.74
TCF4-256	ENST00000626631	LAMTOR3	Q9UHA4	124 aa		4.17	□□□□□ -1.74
TCF4-256	ENST00000626631	AKR1D1	P51857	326 aa		4.16	□□□□□ -1.74
TCF4-256	ENST00000626631	RPL37	P61927	97 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-256	ENST00000626631	C6orf99	Q4VX62	202 aa		4.16	□□□□□ -1.74
TCF4-256	ENST00000626631	COPS9	Q8WXC6	57 aa		4.16	□□□□□ -1.74
TCF4-256	ENST00000626631	COX7B	P24311	80 aa		4.15	□□□□□ -1.75
TCF4-256	ENST00000626631	KRTAP10-7	P60409	375 aa	Predicted RBP	4.15	□□□□□ -1.75
TCF4-256	ENST00000626631	KRTAP5-11	Q6L8G4	156 aa		4.15	□□□□□ -1.75
TCF4-256	ENST00000626631	SMIM29	Q86T20	159 aa		4.15	□□□□□ -1.75
TCF4-256	ENST00000626631	PRO1933	Q9H354	126 aa		4.15	□□□□□ -1.75
TCF4-256	ENST00000626631	C9orf118	A6NHY6	69 aa		4.14	□□□□□ -1.75
TCF4-256	ENST00000626631		H7C2G1	150 aa		4.14	□□□□□ -1.75
TCF4-256	ENST00000626631	IFITM1	P13164	125 aa		4.14	□□□□□ -1.75
TCF4-256	ENST00000626631	COX6B2	Q6YFQ2	88 aa		4.14	□□□□□ -1.75
TCF4-256	ENST00000626631		Q6ZVH6	145 aa		4.14	□□□□□ -1.75
TCF4-256	ENST00000626631	PCP2	Q8IVA1	136 aa		4.14	□□□□□ -1.75
TCF4-256	ENST00000626631	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.13	□□□□□ -1.75
TCF4-256	ENST00000626631	TRBV7-6	A0A0J9YX20	115 aa		4.13	□□□□□ -1.75
TCF4-256	ENST00000626631	TEX49	A0A1B0GTD5	131 aa		4.13	□□□□□ -1.75
TCF4-256	ENST00000626631		A6NDN8	102 aa		4.13	□□□□□ -1.75
TCF4-256	ENST00000626631	TAL2	Q16559	108 aa		4.13	□□□□□ -1.75
TCF4-256	ENST00000626631		Q1RN00	199 aa		4.13	□□□□□ -1.75
TCF4-256	ENST00000626631		A0A1B0GWB2	263 aa		4.12	□□□□□ -1.75
TCF4-256	ENST00000626631	S100A2	P29034	98 aa		4.12	□□□□□ -1.75
TCF4-256	ENST00000626631	SNRPE	P62304	92 aa	Known RBP	4.12	□□□□□ -1.75
TCF4-256	ENST00000626631	MUSTN1	Q8IVN3	82 aa		4.12	□□□□□ -1.75
TCF4-256	ENST00000626631	HIST3H2BB	Q8N257	126 aa		4.12	□□□□□ -1.75
TCF4-256	ENST00000626631	DEFB105A	Q8NG35	78 aa		4.12	□□□□□ -1.75
TCF4-256	ENST00000626631	HIST1H2BL	Q99880	126 aa		4.12	□□□□□ -1.75
TCF4-256	ENST00000626631	IGLV5-48	A0A075B6I7	105 aa		4.11	□□□□□ -1.75
TCF4-256	ENST00000626631		A0A0G2JQZ4	141 aa		4.11	□□□□□ -1.75
TCF4-256	ENST00000626631	TRAV13-2	A0A0B4J235	113 aa		4.1	□□□□□ -1.75
TCF4-256	ENST00000626631		A4D1N5	150 aa		4.1	□□□□□ -1.75
TCF4-256	ENST00000626631	HSBP1L1	C9JCN9	74 aa		4.1	□□□□□ -1.75
TCF4-256	ENST00000626631	S100A6	P06703	90 aa		4.09	□□□□□ -1.75
TCF4-256	ENST00000626631	S100A1	P23297	94 aa		4.09	□□□□□ -1.75
TCF4-256	ENST00000626631	SMIM11B	Q8TCY0	68 aa		4.09	□□□□□ -1.75
TCF4-256	ENST00000626631	NHP2	Q9NX24	153 aa	Known RBP	4.09	□□□□□ -1.75
TCF4-256	ENST00000626631	TCL1B	O95988	128 aa		4.07	□□□□□ -1.76
TCF4-256	ENST00000626631	CFC1	P0CG37	223 aa		4.05	□□□□□ -1.76
TCF4-256	ENST00000626631	VAMP3	Q15836	100 aa		4.05	□□□□□ -1.76
TCF4-256	ENST00000626631		Q6Q795	121 aa		4.05	□□□□□ -1.76
TCF4-256	ENST00000626631		Q75L30	129 aa		4.05	□□□□□ -1.76
TCF4-256	ENST00000626631		F8WEM9	126 aa		4.04	□□□□□ -1.76
TCF4-256	ENST00000626631	SCGB1D1	O95968	90 aa		4.04	□□□□□ -1.76
TCF4-256	ENST00000626631	LINC00575	Q6W349	94 aa		4.04	□□□□□ -1.76
TCF4-256	ENST00000626631	ATP11AUN	Q6ZP68	121 aa		4.04	□□□□□ -1.76
TCF4-256	ENST00000626631		Q6ZQY7	126 aa		4.04	□□□□□ -1.76
TCF4-256	ENST00000626631	C12orf57	Q99622	126 aa		4.04	□□□□□ -1.76
TCF4-256	ENST00000626631	hADV29S1	A0JD25	119 aa		4.03	□□□□□ -1.76
TCF4-256	ENST00000626631	COX8A	P10176	69 aa		4.03	□□□□□ -1.76
TCF4-256	ENST00000626631	OBSCN-AS1	Q96MR7	158 aa		4.03	□□□□□ -1.76
TCF4-256	ENST00000626631	HIST1H4G	Q99525	98 aa		4.03	□□□□□ -1.76
TCF4-256	ENST00000626631	BVES-AS1	Q5T3Y7	98 aa		4.02	□□□□□ -1.77
TCF4-256	ENST00000626631	TRBV7-7	A0A0K0K1E9	115 aa		4.01	□□□□□ -1.77
TCF4-256	ENST00000626631	DLEU1	O43261	78 aa		4.01	□□□□□ -1.77
TCF4-256	ENST00000626631	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.01	□□□□□ -1.77
TCF4-256	ENST00000626631	CLEC2B	Q92478	149 aa		4.01	□□□□□ -1.77
TCF4-256	ENST00000626631		Q6JHZ5	121 aa		4	□□□□□ -1.77
TCF4-256	ENST00000626631	IGFL1	Q6UW32	110 aa		4	□□□□□ -1.77
TCF4-256	ENST00000626631	PPDPFL	Q8WWR9	84 aa		4	□□□□□ -1.77
TCF4-256	ENST00000626631	PAM16	Q9Y3D7	125 aa		4	□□□□□ -1.77
TCF4-256	ENST00000626631	MT2A	P02795	61 aa		3.99	□□□□□ -1.77
TCF4-256	ENST00000626631	SPATA45	Q537H7	98 aa		3.99	□□□□□ -1.77
TCF4-256	ENST00000626631	C14orf144	Q96I85	54 aa		3.99	□□□□□ -1.77
TCF4-256	ENST00000626631		A0A0B4J2C4	111 aa		3.98	□□□□□ -1.77
TCF4-256	ENST00000626631	OCIAD2	Q56VL3	154 aa		3.98	□□□□□ -1.77
TCF4-256	ENST00000626631	RAB37	Q96AX2	223 aa		3.98	□□□□□ -1.77
TCF4-256	ENST00000626631		Q96NJ1	140 aa		3.98	□□□□□ -1.77
TCF4-256	ENST00000626631	C20orf166-AS1	Q96NR2	134 aa		3.98	□□□□□ -1.77
TCF4-256	ENST00000626631	VAMP8	Q9BV40	100 aa		3.98	□□□□□ -1.77
TCF4-256	ENST00000626631	HIGD1B	Q9P298	99 aa		3.98	□□□□□ -1.77
TCF4-256	ENST00000626631	MACF1	Q9UPN3	7388 aa	Known RBP	3.98	□□□□□ -1.77
TCF4-256	ENST00000626631	SYNE2	Q8WXH0	6885 aa	Known RBP	3.97	□□□□□ -1.77
TCF4-256	ENST00000626631		A8MUU9	505 aa		3.97	□□□□□ -1.77
TCF4-256	ENST00000626631	C2orf91	Q6ZV80	131 aa		3.97	□□□□□ -1.77
TCF4-256	ENST00000626631		H3BUT2	72 aa		3.96	□□□□□ -1.78
TCF4-256	ENST00000626631	SNCG	O76070	127 aa		3.96	□□□□□ -1.78
TCF4-256	ENST00000626631	SNHG12	Q9BXW3	62 aa		3.96	□□□□□ -1.78
TCF4-256	ENST00000626631		H0YGX0	51 aa		3.95	□□□□□ -1.78
TCF4-256	ENST00000626631	LST1	O00453	97 aa		3.95	□□□□□ -1.78
TCF4-256	ENST00000626631	MT1F	P04733	61 aa		3.95	□□□□□ -1.78
TCF4-256	ENST00000626631	FAM218A	Q96MZ4	157 aa		3.95	□□□□□ -1.78
TCF4-256	ENST00000626631	TRBV20-1	A0A075B6N2	111 aa		3.94	□□□□□ -1.78
TCF4-256	ENST00000626631	KRTAP16-1	A8MUX0	517 aa		3.94	□□□□□ -1.78
TCF4-256	ENST00000626631	CEND1	Q8N111	149 aa		3.94	□□□□□ -1.78
TCF4-256	ENST00000626631	FXYD2	P54710	66 aa		3.93	□□□□□ -1.78
TCF4-256	ENST00000626631	SS18L2	Q9UHA2	77 aa		3.93	□□□□□ -1.78
TCF4-256	ENST00000626631	PRO1854	Q9UHT4	67 aa		3.93	□□□□□ -1.78
TCF4-256	ENST00000626631		A0A1B0GX51	115 aa		3.92	□□□□□ -1.78
TCF4-256	ENST00000626631	NDUFV3	P56181	108 aa	Known RBP	3.92	□□□□□ -1.78
TCF4-256	ENST00000626631	MPLKIP	Q8TAP9	179 aa		3.92	□□□□□ -1.78
TCF4-256	ENST00000626631	TRIAP1	O43715	76 aa		3.91	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms