RNA–Protein interactions for RNA: ENST00000625260.2

PFKFB3-216, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PFKFB3, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-216ENST00000625260 F8WEM9 126 aa13.05□□□□□ -0.32
PFKFB3-216ENST00000625260 DYNC1H1Q14204 4646 aaKnown RBP13.05□□□□□ -0.32
PFKFB3-216ENST00000625260 IGLV7-43P04211 117 aa13.04□□□□□ -0.32
PFKFB3-216ENST00000625260 SMIM29Q86T20 159 aa13.01□□□□□ -0.33
PFKFB3-216ENST00000625260 CDIP1Q9H305 208 aa13□□□□□ -0.33
PFKFB3-216ENST00000625260 C3orf22Q8N5N4 141 aa12.99□□□□□ -0.33
PFKFB3-216ENST00000625260 A0A1B0GW54 56 aa12.98□□□□□ -0.33
PFKFB3-216ENST00000625260 IGLV8-61A0A075B6I0 122 aa12.97□□□□□ -0.33
PFKFB3-216ENST00000625260 SPRR4Q96PI1 79 aa12.97□□□□□ -0.33
PFKFB3-216ENST00000625260 XGP55808 180 aa12.97□□□□□ -0.33
PFKFB3-216ENST00000625260 LINC00483Q53H64 154 aa12.96□□□□□ -0.34
PFKFB3-216ENST00000625260 Q6JHZ5 121 aa12.93□□□□□ -0.34
PFKFB3-216ENST00000625260 SIGMAR1Q99720 223 aa12.92□□□□□ -0.34
PFKFB3-216ENST00000625260 SMR3BP02814 79 aaPredicted RBP12.9□□□□□ -0.34
PFKFB3-216ENST00000625260 LINC00643Q86TS7 51 aa12.9□□□□□ -0.34
PFKFB3-216ENST00000625260 LINC00846Q9NV44 126 aa12.9□□□□□ -0.34
PFKFB3-216ENST00000625260 RPL37AP61513 92 aaKnown RBP12.89□□□□□ -0.35
PFKFB3-216ENST00000625260 APOBP04114 4563 aaKnown RBP12.89□□□□□ -0.35
PFKFB3-216ENST00000625260 UBL5Q9BZL1 73 aa12.89□□□□□ -0.35
PFKFB3-216ENST00000625260 Q8NBF4 154 aa12.86□□□□□ -0.35
PFKFB3-216ENST00000625260 SRRM2Q9UQ35 2752 aaKnown RBP12.84□□□□□ -0.35
PFKFB3-216ENST00000625260 IGFL1Q6UW32 110 aa12.84□□□□□ -0.35
PFKFB3-216ENST00000625260 A0A1W2PNM2 257 aa12.81□□□□□ -0.36
PFKFB3-216ENST00000625260 ANAPC11Q9NYG5 84 aa12.81□□□□□ -0.36
PFKFB3-216ENST00000625260 CRYGAP11844 174 aa12.81□□□□□ -0.36
PFKFB3-216ENST00000625260 ATP5EP2Q5VTU8 51 aa12.8□□□□□ -0.36
PFKFB3-216ENST00000625260 VPS13BQ7Z7G8 4022 aa12.8□□□□□ -0.36
PFKFB3-216ENST00000625260 Q6Q795 121 aa12.79□□□□□ -0.36
PFKFB3-216ENST00000625260 MT-ATP8P03928 68 aa12.79□□□□□ -0.36
PFKFB3-216ENST00000625260 A0A0G2JQZ4 141 aa12.77□□□□□ -0.36
PFKFB3-216ENST00000625260 C9orf153Q5TBE3 101 aa12.77□□□□□ -0.36
PFKFB3-216ENST00000625260 IMUPQ9GZP8 106 aa12.76□□□□□ -0.37
PFKFB3-216ENST00000625260 IGLV9-49A0A0B4J1Y8 123 aa12.76□□□□□ -0.37
PFKFB3-216ENST00000625260 FAM229BQ4G0N7 80 aa12.76□□□□□ -0.37
PFKFB3-216ENST00000625260 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
PFKFB3-216ENST00000625260 Q6ZVQ6 151 aa12.76□□□□□ -0.37
PFKFB3-216ENST00000625260 TRBV7-7A0A0K0K1E9 115 aa12.74□□□□□ -0.37
PFKFB3-216ENST00000625260 NREPQ16612 68 aa12.74□□□□□ -0.37
PFKFB3-216ENST00000625260 CDK2AP2O75956 126 aa12.71□□□□□ -0.37
PFKFB3-216ENST00000625260 MOBPQ13875 183 aa12.7□□□□□ -0.38
PFKFB3-216ENST00000625260 SSBP3-AS1Q7Z2R9 100 aa12.7□□□□□ -0.38
PFKFB3-216ENST00000625260 FAT1Q14517 4588 aa12.69□□□□□ -0.38
PFKFB3-216ENST00000625260 SCGB1A1P11684 91 aa12.69□□□□□ -0.38
PFKFB3-216ENST00000625260 CXCL6P80162 114 aa12.69□□□□□ -0.38
PFKFB3-216ENST00000625260 KRTAP10-4P60372 401 aaPredicted RBP12.68□□□□□ -0.38
PFKFB3-216ENST00000625260 EPPK1P58107 5090 aaKnown RBP12.66□□□□□ -0.38
PFKFB3-216ENST00000625260 A0A087WSZ3 146 aa12.64□□□□□ -0.39
PFKFB3-216ENST00000625260 PLA2G1BP04054 148 aaKnown RBP12.64□□□□□ -0.39
PFKFB3-216ENST00000625260 IGKV3D-7A0A0C4DH55 119 aa12.63□□□□□ -0.39
PFKFB3-216ENST00000625260 FAM229AH3BQW9 127 aa12.63□□□□□ -0.39
PFKFB3-216ENST00000625260 KRTAP1-4P0C5Y4 121 aa12.63□□□□□ -0.39
PFKFB3-216ENST00000625260 CD164Q04900 197 aa12.63□□□□□ -0.39
PFKFB3-216ENST00000625260 A0A087X002 238 aa12.61□□□□□ -0.39
PFKFB3-216ENST00000625260 SS18L2Q9UHA2 77 aa12.61□□□□□ -0.39
PFKFB3-216ENST00000625260 HSPG2P98160 4391 aa12.6□□□□□ -0.39
PFKFB3-216ENST00000625260 BPY2O14599 106 aa12.6□□□□□ -0.39
PFKFB3-216ENST00000625260 KRTAP13-2Q52LG2 175 aa12.56□□□□□ -0.4
PFKFB3-216ENST00000625260 RYR1P21817 5038 aa12.56□□□□□ -0.4
PFKFB3-216ENST00000625260 KRTAP17-1Q9BYP8 105 aa12.56□□□□□ -0.4
PFKFB3-216ENST00000625260 Q5VSD8 79 aa12.55□□□□□ -0.4
PFKFB3-216ENST00000625260 HRCT1Q6UXD1 115 aa12.55□□□□□ -0.4
PFKFB3-216ENST00000625260 HIST1H4AP62805 103 aaKnown RBP12.53□□□□□ -0.4
PFKFB3-216ENST00000625260 J3KT08 172 aa12.5□□□□□ -0.41
PFKFB3-216ENST00000625260 TYMSOSQ8TAI1 123 aa12.48□□□□□ -0.41
PFKFB3-216ENST00000625260 KIAA1109Q2LD37 5005 aa12.48□□□□□ -0.41
PFKFB3-216ENST00000625260 LINC00472Q9H8W2 130 aa12.48□□□□□ -0.41
PFKFB3-216ENST00000625260 PRR26Q8N8Z3 221 aa12.45□□□□□ -0.42
PFKFB3-216ENST00000625260 Q5XG85 94 aa12.44□□□□□ -0.42
PFKFB3-216ENST00000625260 FAM236AA0A1B0GUQ0 79 aa12.43□□□□□ -0.42
PFKFB3-216ENST00000625260 FAM236BA0A1B0GV22 79 aa12.43□□□□□ -0.42
PFKFB3-216ENST00000625260 ASB16-AS1Q495Z4 193 aa12.43□□□□□ -0.42
PFKFB3-216ENST00000625260 C4orf48Q5BLP8 95 aa12.43□□□□□ -0.42
PFKFB3-216ENST00000625260 PKHD1L1Q86WI1 4243 aa12.43□□□□□ -0.42
PFKFB3-216ENST00000625260 DSCR10P59022 87 aa12.42□□□□□ -0.42
PFKFB3-216ENST00000625260 A0A087WVE0 104 aa12.41□□□□□ -0.42
PFKFB3-216ENST00000625260 IGKV4-1P06312 121 aa12.41□□□□□ -0.42
PFKFB3-216ENST00000625260 SPAG11AQ6PDA7 123 aa12.41□□□□□ -0.42
PFKFB3-216ENST00000625260 LIMD2Q9BT23 127 aa12.41□□□□□ -0.42
PFKFB3-216ENST00000625260 SPINK1P00995 79 aa12.4□□□□□ -0.42
PFKFB3-216ENST00000625260 Q8N1X5 172 aa12.4□□□□□ -0.42
PFKFB3-216ENST00000625260 RPS29P62273 56 aaKnown RBP12.38□□□□□ -0.43
PFKFB3-216ENST00000625260 A8MWP4 228 aa12.37□□□□□ -0.43
PFKFB3-216ENST00000625260 DEFB116Q30KQ4 102 aa12.37□□□□□ -0.43
PFKFB3-216ENST00000625260 Q96NJ1 140 aa12.37□□□□□ -0.43
PFKFB3-216ENST00000625260 NDUFB1O75438 58 aa12.36□□□□□ -0.43
PFKFB3-216ENST00000625260 ATOX1O00244 68 aa12.35□□□□□ -0.43
PFKFB3-216ENST00000625260 Q8N9L7 120 aa12.35□□□□□ -0.43
PFKFB3-216ENST00000625260 PCP4P48539 62 aa12.35□□□□□ -0.43
PFKFB3-216ENST00000625260 K7EQZ3 153 aa12.34□□□□□ -0.43
PFKFB3-216ENST00000625260 LINC00304Q8N9R0 145 aa12.34□□□□□ -0.43
PFKFB3-216ENST00000625260 PRR15Q8IV56 129 aa12.32□□□□□ -0.44
PFKFB3-216ENST00000625260 ANAPC13Q9BS18 74 aa12.31□□□□□ -0.44
PFKFB3-216ENST00000625260 SMIM20Q8N5G0 67 aa12.28□□□□□ -0.44
PFKFB3-216ENST00000625260 HCG22E2RYF7 251 aa12.25□□□□□ -0.45
PFKFB3-216ENST00000625260 KRTAP4-5Q9BYR2 181 aa12.23□□□□□ -0.45
PFKFB3-216ENST00000625260 A0A1B0GVX0 72 aa12.22□□□□□ -0.45
PFKFB3-216ENST00000625260 LRP1Q07954 4544 aaKnown RBP12.21□□□□□ -0.45
PFKFB3-216ENST00000625260 C1orf195Q5TG92 126 aa12.21□□□□□ -0.45
PFKFB3-216ENST00000625260 BIRC6Q9NR09 4857 aa12.18□□□□□ -0.46
PFKFB3-216ENST00000625260 SERP2Q8N6R1 65 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms