RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 SCXQ7RTU7 201 aa4.32□□□□□ -1.72
CBWD3-219ENST00000622817 SMCR5Q8TEV8 140 aa4.32□□□□□ -1.72
CBWD3-219ENST00000622817 PSORS1C2Q9UIG4 136 aa4.32□□□□□ -1.72
CBWD3-219ENST00000622817 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
CBWD3-219ENST00000622817 JMJD7-PLA2G4BH0Y9G9 81 aa4.32□□□□□ -1.72
CBWD3-219ENST00000622817 ERC2-IT1O76042 136 aa4.32□□□□□ -1.72
CBWD3-219ENST00000622817 HIGD2AQ9BW72 106 aa4.32□□□□□ -1.72
CBWD3-219ENST00000622817 PKD1P98161 4303 aa4.31□□□□□ -1.72
CBWD3-219ENST00000622817 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
CBWD3-219ENST00000622817 DEFB105AQ8NG35 78 aa4.31□□□□□ -1.72
CBWD3-219ENST00000622817 OBSCN-AS1Q96MR7 158 aa4.31□□□□□ -1.72
CBWD3-219ENST00000622817 LAMTOR3Q9UHA4 124 aa4.31□□□□□ -1.72
CBWD3-219ENST00000622817 IGLV5-48A0A075B6I7 105 aa4.3□□□□□ -1.72
CBWD3-219ENST00000622817 C1orf137Q5JT78 98 aa4.3□□□□□ -1.72
CBWD3-219ENST00000622817 ST20-AS1Q8NBB2 130 aa4.3□□□□□ -1.72
CBWD3-219ENST00000622817 KMT2CQ8NEZ4 4911 aaKnown RBP4.3□□□□□ -1.72
CBWD3-219ENST00000622817 NDUFV3P56181 108 aaKnown RBP4.3□□□□□ -1.72
CBWD3-219ENST00000622817 LINC01547P58512 204 aaPredicted RBP4.3□□□□□ -1.72
CBWD3-219ENST00000622817 Q8N377 158 aa4.3□□□□□ -1.72
CBWD3-219ENST00000622817 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
CBWD3-219ENST00000622817 RBM3P98179 157 aaKnown RBP4.29□□□□□ -1.72
CBWD3-219ENST00000622817 KRTAP4-5Q9BYR2 181 aa4.29□□□□□ -1.72
CBWD3-219ENST00000622817 ZNF861PO60384 105 aa4.28□□□□□ -1.72
CBWD3-219ENST00000622817 HAMPP81172 84 aa4.28□□□□□ -1.72
CBWD3-219ENST00000622817 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
CBWD3-219ENST00000622817 A0A1B0GV72 72 aa4.28□□□□□ -1.72
CBWD3-219ENST00000622817 IGLV7-43P04211 117 aa4.28□□□□□ -1.72
CBWD3-219ENST00000622817 DNAH8Q96JB1 4490 aa4.27□□□□□ -1.73
CBWD3-219ENST00000622817 PDE6GP18545 87 aa4.27□□□□□ -1.73
CBWD3-219ENST00000622817 SPRR1BP22528 89 aa4.27□□□□□ -1.73
CBWD3-219ENST00000622817 DSCR8Q96T75 97 aa4.27□□□□□ -1.73
CBWD3-219ENST00000622817 ZNF706Q9Y5V0 76 aaPredicted RBP4.27□□□□□ -1.73
CBWD3-219ENST00000622817 LOC110117498A0A087WWA1 95 aa4.26□□□□□ -1.73
CBWD3-219ENST00000622817 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
CBWD3-219ENST00000622817 F8WEM9 126 aa4.26□□□□□ -1.73
CBWD3-219ENST00000622817 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
CBWD3-219ENST00000622817 CCKP06307 115 aa4.25□□□□□ -1.73
CBWD3-219ENST00000622817 ACYP1P07311 99 aa4.25□□□□□ -1.73
CBWD3-219ENST00000622817 XGP55808 180 aa4.25□□□□□ -1.73
CBWD3-219ENST00000622817 SMIM29Q86T20 159 aa4.25□□□□□ -1.73
CBWD3-219ENST00000622817 C3orf22Q8N5N4 141 aa4.25□□□□□ -1.73
CBWD3-219ENST00000622817 SPRR4Q96PI1 79 aa4.25□□□□□ -1.73
CBWD3-219ENST00000622817 TRBV7-4A0A0J9YYF1 115 aa4.24□□□□□ -1.73
CBWD3-219ENST00000622817 Q6ZQT0 140 aa4.24□□□□□ -1.73
CBWD3-219ENST00000622817 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
CBWD3-219ENST00000622817 LINC00483Q53H64 154 aa4.24□□□□□ -1.73
CBWD3-219ENST00000622817 PKHD1P08F94 4074 aa4.23□□□□□ -1.73
CBWD3-219ENST00000622817 IGLV8-61A0A075B6I0 122 aa4.23□□□□□ -1.73
CBWD3-219ENST00000622817 RPL37AP61513 92 aaKnown RBP4.22□□□□□ -1.73
CBWD3-219ENST00000622817 VPS25Q9BRG1 176 aa4.22□□□□□ -1.73
CBWD3-219ENST00000622817 DYNC1H1Q14204 4646 aaKnown RBP4.22□□□□□ -1.73
CBWD3-219ENST00000622817 RYR3Q15413 4870 aa4.21□□□□□ -1.73
CBWD3-219ENST00000622817 Q6JHZ5 121 aa4.21□□□□□ -1.74
CBWD3-219ENST00000622817 LRP1BQ9NZR2 4599 aa4.21□□□□□ -1.74
CBWD3-219ENST00000622817 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
CBWD3-219ENST00000622817 A0A1B0GW54 56 aa4.2□□□□□ -1.74
CBWD3-219ENST00000622817 CDK2AP2O75956 126 aa4.2□□□□□ -1.74
CBWD3-219ENST00000622817 IGLV9-49A0A0B4J1Y8 123 aa4.19□□□□□ -1.74
CBWD3-219ENST00000622817 IGFL1Q6UW32 110 aa4.19□□□□□ -1.74
CBWD3-219ENST00000622817 SPINK6Q6UWN8 80 aa4.19□□□□□ -1.74
CBWD3-219ENST00000622817 Q8NBF4 154 aa4.19□□□□□ -1.74
CBWD3-219ENST00000622817 LINC00846Q9NV44 126 aa4.19□□□□□ -1.74
CBWD3-219ENST00000622817 ANAPC11Q9NYG5 84 aa4.19□□□□□ -1.74
CBWD3-219ENST00000622817 A0A1W2PNM2 257 aa4.18□□□□□ -1.74
CBWD3-219ENST00000622817 C9orf153Q5TBE3 101 aa4.18□□□□□ -1.74
CBWD3-219ENST00000622817 FAM229BQ4G0N7 80 aa4.18□□□□□ -1.74
CBWD3-219ENST00000622817 UBL5Q9BZL1 73 aa4.18□□□□□ -1.74
CBWD3-219ENST00000622817 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
CBWD3-219ENST00000622817 CRYGAP11844 174 aa4.16□□□□□ -1.74
CBWD3-219ENST00000622817 MOBPQ13875 183 aa4.16□□□□□ -1.74
CBWD3-219ENST00000622817 Q6Q795 121 aa4.16□□□□□ -1.74
CBWD3-219ENST00000622817 SIGMAR1Q99720 223 aa4.16□□□□□ -1.74
CBWD3-219ENST00000622817 VPS13BQ7Z7G8 4022 aa4.16□□□□□ -1.74
CBWD3-219ENST00000622817 A0A0G2JQZ4 141 aa4.15□□□□□ -1.74
CBWD3-219ENST00000622817 KRTAP10-4P60372 401 aaPredicted RBP4.15□□□□□ -1.74
CBWD3-219ENST00000622817 KRTAP1-4P0C5Y4 121 aa4.15□□□□□ -1.75
CBWD3-219ENST00000622817 SSBP3-AS1Q7Z2R9 100 aa4.15□□□□□ -1.75
CBWD3-219ENST00000622817 APOBP04114 4563 aaKnown RBP4.14□□□□□ -1.75
CBWD3-219ENST00000622817 MT-ATP8P03928 68 aa4.14□□□□□ -1.75
CBWD3-219ENST00000622817 NREPQ16612 68 aa4.14□□□□□ -1.75
CBWD3-219ENST00000622817 Q6ZVQ6 151 aa4.14□□□□□ -1.75
CBWD3-219ENST00000622817 TRBV7-7A0A0K0K1E9 115 aa4.13□□□□□ -1.75
CBWD3-219ENST00000622817 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
CBWD3-219ENST00000622817 ATP5EP2Q5VTU8 51 aa4.13□□□□□ -1.75
CBWD3-219ENST00000622817 A0A087WSZ3 146 aa4.13□□□□□ -1.75
CBWD3-219ENST00000622817 A0A087X002 238 aa4.13□□□□□ -1.75
CBWD3-219ENST00000622817 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
CBWD3-219ENST00000622817 CD164Q04900 197 aa4.12□□□□□ -1.75
CBWD3-219ENST00000622817 Q5VSD8 79 aa4.12□□□□□ -1.75
CBWD3-219ENST00000622817 IGKV3D-7A0A0C4DH55 119 aa4.11□□□□□ -1.75
CBWD3-219ENST00000622817 CXCL6P80162 114 aa4.11□□□□□ -1.75
CBWD3-219ENST00000622817 HRCT1Q6UXD1 115 aa4.11□□□□□ -1.75
CBWD3-219ENST00000622817 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
CBWD3-219ENST00000622817 IMUPQ9GZP8 106 aa4.11□□□□□ -1.75
CBWD3-219ENST00000622817 RYR1P21817 5038 aa4.1□□□□□ -1.75
CBWD3-219ENST00000622817 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
CBWD3-219ENST00000622817 SS18L2Q9UHA2 77 aa4.1□□□□□ -1.75
CBWD3-219ENST00000622817 BPY2O14599 106 aa4.09□□□□□ -1.75
CBWD3-219ENST00000622817 Q8N1X5 172 aa4.09□□□□□ -1.75
CBWD3-219ENST00000622817 PRR26Q8N8Z3 221 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms