RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 Q5VSD8 79 aa10.8□□□□□ -0.68
PTCHD3-202ENST00000622555 DEFB105AQ8NG35 78 aa10.8□□□□□ -0.68
PTCHD3-202ENST00000622555 SRRM2Q9UQ35 2752 aaKnown RBP10.79□□□□□ -0.68
PTCHD3-202ENST00000622555 HSPG2P98160 4391 aa10.79□□□□□ -0.68
PTCHD3-202ENST00000622555 C14orf132Q9NPU4 83 aa10.78□□□□□ -0.68
PTCHD3-202ENST00000622555 FAT1Q14517 4588 aa10.77□□□□□ -0.69
PTCHD3-202ENST00000622555 ZNF706Q9Y5V0 76 aaPredicted RBP10.76□□□□□ -0.69
PTCHD3-202ENST00000622555 LINC01547P58512 204 aaPredicted RBP10.75□□□□□ -0.69
PTCHD3-202ENST00000622555 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
PTCHD3-202ENST00000622555 Q6Q795 121 aa10.75□□□□□ -0.69
PTCHD3-202ENST00000622555 Q8N1X5 172 aa10.75□□□□□ -0.69
PTCHD3-202ENST00000622555 IGLV5-48A0A075B6I7 105 aa10.75□□□□□ -0.69
PTCHD3-202ENST00000622555 GHRHP01286 108 aa10.75□□□□□ -0.69
PTCHD3-202ENST00000622555 SPINK6Q6UWN8 80 aa10.75□□□□□ -0.69
PTCHD3-202ENST00000622555 SPRR4Q96PI1 79 aa10.75□□□□□ -0.69
PTCHD3-202ENST00000622555 KRTAP17-1Q9BYP8 105 aa10.74□□□□□ -0.69
PTCHD3-202ENST00000622555 CCKP06307 115 aa10.73□□□□□ -0.69
PTCHD3-202ENST00000622555 Q8N377 158 aa10.73□□□□□ -0.69
PTCHD3-202ENST00000622555 LINC00643Q86TS7 51 aa10.72□□□□□ -0.69
PTCHD3-202ENST00000622555 BIRC6Q9NR09 4857 aa10.72□□□□□ -0.69
PTCHD3-202ENST00000622555 TRBV7-7A0A0K0K1E9 115 aa10.7□□□□□ -0.7
PTCHD3-202ENST00000622555 SPRR1BP22528 89 aa10.7□□□□□ -0.7
PTCHD3-202ENST00000622555 LOC110117498A0A087WWA1 95 aa10.69□□□□□ -0.7
PTCHD3-202ENST00000622555 RBM3P98179 157 aaKnown RBP10.68□□□□□ -0.7
PTCHD3-202ENST00000622555 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
PTCHD3-202ENST00000622555 C3orf22Q8N5N4 141 aa10.68□□□□□ -0.7
PTCHD3-202ENST00000622555 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
PTCHD3-202ENST00000622555 LINC00846Q9NV44 126 aa10.67□□□□□ -0.7
PTCHD3-202ENST00000622555 LAMTOR3Q9UHA4 124 aa10.67□□□□□ -0.7
PTCHD3-202ENST00000622555 Q6ZQT0 140 aa10.66□□□□□ -0.7
PTCHD3-202ENST00000622555 IMUPQ9GZP8 106 aa10.66□□□□□ -0.7
PTCHD3-202ENST00000622555 A0A1B0GV72 72 aa10.65□□□□□ -0.7
PTCHD3-202ENST00000622555 NDUFV3P56181 108 aaKnown RBP10.65□□□□□ -0.7
PTCHD3-202ENST00000622555 SMIM29Q86T20 159 aa10.65□□□□□ -0.7
PTCHD3-202ENST00000622555 PDE6GP18545 87 aa10.64□□□□□ -0.71
PTCHD3-202ENST00000622555 KRTAP1-4P0C5Y4 121 aa10.63□□□□□ -0.71
PTCHD3-202ENST00000622555 F8WEM9 126 aa10.62□□□□□ -0.71
PTCHD3-202ENST00000622555 TRBV7-4A0A0J9YYF1 115 aa10.61□□□□□ -0.71
PTCHD3-202ENST00000622555 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
PTCHD3-202ENST00000622555 IGLV9-49A0A0B4J1Y8 123 aa10.6□□□□□ -0.71
PTCHD3-202ENST00000622555 FAM229BQ4G0N7 80 aa10.6□□□□□ -0.71
PTCHD3-202ENST00000622555 Q6JHZ5 121 aa10.6□□□□□ -0.71
PTCHD3-202ENST00000622555 DSCR8Q96T75 97 aa10.59□□□□□ -0.71
PTCHD3-202ENST00000622555 C9orf153Q5TBE3 101 aa10.58□□□□□ -0.72
PTCHD3-202ENST00000622555 A0A087X002 238 aa10.57□□□□□ -0.72
PTCHD3-202ENST00000622555 CRYGAP11844 174 aa10.57□□□□□ -0.72
PTCHD3-202ENST00000622555 PKHD1L1Q86WI1 4243 aa10.56□□□□□ -0.72
PTCHD3-202ENST00000622555 MOBPQ13875 183 aa10.55□□□□□ -0.72
PTCHD3-202ENST00000622555 KRTAP4-5Q9BYR2 181 aa10.55□□□□□ -0.72
PTCHD3-202ENST00000622555 IGLV8-61A0A075B6I0 122 aa10.53□□□□□ -0.72
PTCHD3-202ENST00000622555 KRTAP13-2Q52LG2 175 aa10.53□□□□□ -0.72
PTCHD3-202ENST00000622555 Q8NBF4 154 aa10.53□□□□□ -0.72
PTCHD3-202ENST00000622555 PRR26Q8N8Z3 221 aa10.52□□□□□ -0.73
PTCHD3-202ENST00000622555 FLG2Q5D862 2391 aaPredicted RBP10.51□□□□□ -0.73
PTCHD3-202ENST00000622555 ATP5EP2Q5VTU8 51 aa10.51□□□□□ -0.73
PTCHD3-202ENST00000622555 UBL5Q9BZL1 73 aa10.5□□□□□ -0.73
PTCHD3-202ENST00000622555 HERC2O95714 4834 aa10.5□□□□□ -0.73
PTCHD3-202ENST00000622555 IGKV3D-7A0A0C4DH55 119 aa10.49□□□□□ -0.73
PTCHD3-202ENST00000622555 A0A0G2JQZ4 141 aa10.49□□□□□ -0.73
PTCHD3-202ENST00000622555 IGFL1Q6UW32 110 aa10.49□□□□□ -0.73
PTCHD3-202ENST00000622555 ANAPC13Q9BS18 74 aa10.49□□□□□ -0.73
PTCHD3-202ENST00000622555 TYMSOSQ8TAI1 123 aa10.48□□□□□ -0.73
PTCHD3-202ENST00000622555 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
PTCHD3-202ENST00000622555 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
PTCHD3-202ENST00000622555 FAM236AA0A1B0GUQ0 79 aa10.45□□□□□ -0.74
PTCHD3-202ENST00000622555 FAM236BA0A1B0GV22 79 aa10.45□□□□□ -0.74
PTCHD3-202ENST00000622555 Q6ZVQ6 151 aa10.45□□□□□ -0.74
PTCHD3-202ENST00000622555 A0A1B0GW54 56 aa10.41□□□□□ -0.74
PTCHD3-202ENST00000622555 A0A1W2PNM2 257 aa10.41□□□□□ -0.74
PTCHD3-202ENST00000622555 HRCT1Q6UXD1 115 aa10.4□□□□□ -0.74
PTCHD3-202ENST00000622555 CXCL6P80162 114 aa10.38□□□□□ -0.75
PTCHD3-202ENST00000622555 LRP1Q07954 4544 aaKnown RBP10.37□□□□□ -0.75
PTCHD3-202ENST00000622555 A0A087WVE0 104 aa10.36□□□□□ -0.75
PTCHD3-202ENST00000622555 OXTP01178 125 aa10.36□□□□□ -0.75
PTCHD3-202ENST00000622555 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
PTCHD3-202ENST00000622555 ABCA13Q86UQ4 5058 aa10.36□□□□□ -0.75
PTCHD3-202ENST00000622555 LINC00304Q8N9R0 145 aa10.36□□□□□ -0.75
PTCHD3-202ENST00000622555 C4orf48Q5BLP8 95 aa10.35□□□□□ -0.75
PTCHD3-202ENST00000622555 CD164Q04900 197 aa10.34□□□□□ -0.75
PTCHD3-202ENST00000622555 FAT3Q8TDW7 4589 aa10.33□□□□□ -0.76
PTCHD3-202ENST00000622555 ATOX1O00244 68 aa10.33□□□□□ -0.76
PTCHD3-202ENST00000622555 MYCBP2O75592 4640 aa10.32□□□□□ -0.76
PTCHD3-202ENST00000622555 CCDC179H3BU77 68 aa10.31□□□□□ -0.76
PTCHD3-202ENST00000622555 MT1HL1P0DM35 61 aa10.31□□□□□ -0.76
PTCHD3-202ENST00000622555 A0A087WSZ3 146 aa10.3□□□□□ -0.76
PTCHD3-202ENST00000622555 SPAG11AQ6PDA7 123 aa10.3□□□□□ -0.76
PTCHD3-202ENST00000622555 KRTAP29-1A8MX34 341 aaPredicted RBP10.3□□□□□ -0.76
PTCHD3-202ENST00000622555 NREPQ16612 68 aa10.3□□□□□ -0.76
PTCHD3-202ENST00000622555 SPINK1P00995 79 aa10.28□□□□□ -0.76
PTCHD3-202ENST00000622555 TNXBP22105 4242 aa10.24□□□□□ -0.77
PTCHD3-202ENST00000622555 COX7CP15954 63 aa10.24□□□□□ -0.77
PTCHD3-202ENST00000622555 UQCRQO14949 82 aa10.24□□□□□ -0.77
PTCHD3-202ENST00000622555 LIMD2Q9BT23 127 aa10.24□□□□□ -0.77
PTCHD3-202ENST00000622555 SS18L2Q9UHA2 77 aa10.24□□□□□ -0.77
PTCHD3-202ENST00000622555 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
PTCHD3-202ENST00000622555 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
PTCHD3-202ENST00000622555 SERP2Q8N6R1 65 aa10.21□□□□□ -0.77
PTCHD3-202ENST00000622555 J3QL48 77 aa10.21□□□□□ -0.78
PTCHD3-202ENST00000622555 BPY2O14599 106 aa10.21□□□□□ -0.78
PTCHD3-202ENST00000622555 Q5XG85 94 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms