RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 A0A1W2PNM2 257 aa5.17□□□□□ -1.58
VPS11-209ENST00000622309 C1orf137Q5JT78 98 aa5.17□□□□□ -1.58
VPS11-209ENST00000622309 IGLV5-48A0A075B6I7 105 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 DEFB130BP0DP73 79 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 DEFB130AP0DP74 79 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 H3BPC8 53 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 KRTAP24-1Q3LI83 254 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 Q8NBF4 154 aa5.16□□□□□ -1.58
VPS11-209ENST00000622309 C1orf134Q5TEV5 83 aa5.15□□□□□ -1.59
VPS11-209ENST00000622309 Q8N377 158 aa5.15□□□□□ -1.59
VPS11-209ENST00000622309 LINC00476Q8WZB0 136 aa5.15□□□□□ -1.59
VPS11-209ENST00000622309 LINC01558Q9Y6Z2 57 aa5.15□□□□□ -1.59
VPS11-209ENST00000622309 SPINK7P58062 85 aa5.14□□□□□ -1.59
VPS11-209ENST00000622309 CMC4P56277 68 aaPredicted RBP5.13□□□□□ -1.59
VPS11-209ENST00000622309 C6orf48Q9UBA6 75 aa5.13□□□□□ -1.59
VPS11-209ENST00000622309 GVQW2A0A096LPI5 108 aaPredicted RBP5.12□□□□□ -1.59
VPS11-209ENST00000622309 ANK3Q12955 4377 aaKnown RBP5.12□□□□□ -1.59
VPS11-209ENST00000622309 IGKV2D-24A0A075B6R9 120 aa5.12□□□□□ -1.59
VPS11-209ENST00000622309 C4orf3Q8WVX3 66 aa5.11□□□□□ -1.59
VPS11-209ENST00000622309 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
VPS11-209ENST00000622309 VWFP04275 2813 aa5.11□□□□□ -1.59
VPS11-209ENST00000622309 PRO0255Q9UI72 69 aa5.1□□□□□ -1.59
VPS11-209ENST00000622309 C9orf163Q8N9P6 203 aa5.1□□□□□ -1.59
VPS11-209ENST00000622309 CAMK2N2Q96S95 79 aa5.1□□□□□ -1.59
VPS11-209ENST00000622309 IGLV7-46A0A075B6I9 117 aa5.09□□□□□ -1.59
VPS11-209ENST00000622309 Q8NAQ8 132 aa5.09□□□□□ -1.59
VPS11-209ENST00000622309 C7orf33Q8WU49 177 aa5.09□□□□□ -1.59
VPS11-209ENST00000622309 DEFB4AO15263 64 aa5.08□□□□□ -1.6
VPS11-209ENST00000622309 GIG44P09565 113 aaPredicted RBP5.08□□□□□ -1.6
VPS11-209ENST00000622309 DHRS4-AS1Q9P1J3 65 aa5.08□□□□□ -1.6
VPS11-209ENST00000622309 ANK2Q01484 3957 aa5.08□□□□□ -1.6
VPS11-209ENST00000622309 CSNK1G2-AS1Q8NCQ2 148 aa5.08□□□□□ -1.6
VPS11-209ENST00000622309 PLAC8Q9NZF1 115 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 PCOTHQ58A44 107 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 TRRAPQ9Y4A5 3859 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 HTN3P15516 51 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 TENM1Q9UKZ4 2725 aa5.07□□□□□ -1.6
VPS11-209ENST00000622309 CNBPP62633 177 aaKnown RBP5.06□□□□□ -1.6
VPS11-209ENST00000622309 EGFEM1PQ0D2K5 195 aa5.06□□□□□ -1.6
VPS11-209ENST00000622309 CSAG1Q6PB30 78 aa5.06□□□□□ -1.6
VPS11-209ENST00000622309 RPL37AP61513 92 aaKnown RBP5.05□□□□□ -1.6
VPS11-209ENST00000622309 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
VPS11-209ENST00000622309 ASB16-AS1Q495Z4 193 aa5.04□□□□□ -1.6
VPS11-209ENST00000622309 IGLV1-51P01701 117 aa5.03□□□□□ -1.6
VPS11-209ENST00000622309 A0A087WSZ3 146 aa5.03□□□□□ -1.6
VPS11-209ENST00000622309 IGLV9-49A0A0B4J1Y8 123 aa5.03□□□□□ -1.6
VPS11-209ENST00000622309 Q6ZRX8 168 aa5.03□□□□□ -1.6
VPS11-209ENST00000622309 IGLV1-50A0A075B6I6 118 aa5.02□□□□□ -1.61
VPS11-209ENST00000622309 KRTAP10-3P60369 221 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 A0A0G2JQZ4 141 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 A0A1W2PNN7 141 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 RPL37AP8A6NKH3 93 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
VPS11-209ENST00000622309 MEGF8Q7Z7M0 2845 aa5□□□□□ -1.61
VPS11-209ENST00000622309 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
VPS11-209ENST00000622309 DEFB135Q30KP9 77 aa5□□□□□ -1.61
VPS11-209ENST00000622309 PRR34Q9NV39 138 aa5□□□□□ -1.61
VPS11-209ENST00000622309 IGLV5-37A0A075B6J1 123 aa4.99□□□□□ -1.61
VPS11-209ENST00000622309 CDK2AP2O75956 126 aa4.99□□□□□ -1.61
VPS11-209ENST00000622309 HRES1P13985 223 aa4.99□□□□□ -1.61
VPS11-209ENST00000622309 LELP1Q5T871 98 aa4.99□□□□□ -1.61
VPS11-209ENST00000622309 IGFL1Q6UW32 110 aa4.98□□□□□ -1.61
VPS11-209ENST00000622309 RTL8CO15255 209 aa4.98□□□□□ -1.61
VPS11-209ENST00000622309 A0A087X002 238 aa4.97□□□□□ -1.61
VPS11-209ENST00000622309 A8MWP4 228 aa4.97□□□□□ -1.61
VPS11-209ENST00000622309 ROMO1P60602 79 aa4.96□□□□□ -1.62
VPS11-209ENST00000622309 Q6ZR54 194 aa4.96□□□□□ -1.62
VPS11-209ENST00000622309 MGAM2Q2M2H8 2515 aa4.95□□□□□ -1.62
VPS11-209ENST00000622309 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
VPS11-209ENST00000622309 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
VPS11-209ENST00000622309 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
VPS11-209ENST00000622309 KRTAP4-16G5E9R7 235 aaPredicted RBP4.93□□□□□ -1.62
VPS11-209ENST00000622309 FAM229AH3BQW9 127 aa4.93□□□□□ -1.62
VPS11-209ENST00000622309 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 IGKV2-24A0A0C4DH68 120 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 SPRR1AP35321 89 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 PKD1L1Q8TDX9 2849 aa4.92□□□□□ -1.62
VPS11-209ENST00000622309 A0A1B0GU69 56 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 TGP01266 2768 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 NOTCH1P46531 2555 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
VPS11-209ENST00000622309 P0C880 135 aa4.9□□□□□ -1.63
VPS11-209ENST00000622309 FAM168BA1KXE4 195 aa4.9□□□□□ -1.63
VPS11-209ENST00000622309 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
VPS11-209ENST00000622309 CHTF8P0CG12 524 aa4.89□□□□□ -1.63
VPS11-209ENST00000622309 LINC00472Q9H8W2 130 aa4.88□□□□□ -1.63
VPS11-209ENST00000622309 UQCR11O14957 56 aa4.88□□□□□ -1.63
VPS11-209ENST00000622309 ACYP2P14621 99 aa4.88□□□□□ -1.63
VPS11-209ENST00000622309 IGLV8-61A0A075B6I0 122 aa4.87□□□□□ -1.63
VPS11-209ENST00000622309 KRTAP26-1Q6PEX3 210 aa4.87□□□□□ -1.63
VPS11-209ENST00000622309 SPART-AS1P0CW21 52 aa4.86□□□□□ -1.63
VPS11-209ENST00000622309 TENM3Q9P273 2699 aa4.84□□□□□ -1.63
VPS11-209ENST00000622309 PRLHP81277 87 aa4.84□□□□□ -1.63
VPS11-209ENST00000622309 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.64
VPS11-209ENST00000622309 TLX1NBP0CAT3 122 aa4.83□□□□□ -1.64
VPS11-209ENST00000622309 A0A096LNI7 61 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms