RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 STAB1Q9NY15 2570 aa5.98□□□□□ -1.45
IGHV3-54-201ENST00000622166 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.97□□□□□ -1.45
IGHV3-54-201ENST00000622166 A0A0G2JQZ4 141 aa5.97□□□□□ -1.45
IGHV3-54-201ENST00000622166 CHTF8P0CG12 524 aa5.97□□□□□ -1.45
IGHV3-54-201ENST00000622166 NBDYA0A0U1RRE5 68 aa5.96□□□□□ -1.46
IGHV3-54-201ENST00000622166 LINC00474Q9P2X8 69 aa5.96□□□□□ -1.46
IGHV3-54-201ENST00000622166 A0A087WSZ3 146 aa5.95□□□□□ -1.46
IGHV3-54-201ENST00000622166 HRCT1Q6UXD1 115 aa5.95□□□□□ -1.46
IGHV3-54-201ENST00000622166 Q6ZRN7 208 aaPredicted RBP5.95□□□□□ -1.46
IGHV3-54-201ENST00000622166 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
IGHV3-54-201ENST00000622166 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
IGHV3-54-201ENST00000622166 ANK2Q01484 3957 aa5.94□□□□□ -1.46
IGHV3-54-201ENST00000622166 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
IGHV3-54-201ENST00000622166 NUPR2A6NF83 97 aa5.93□□□□□ -1.46
IGHV3-54-201ENST00000622166 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
IGHV3-54-201ENST00000622166 PRR15Q8IV56 129 aa5.91□□□□□ -1.46
IGHV3-54-201ENST00000622166 A8MWP4 228 aa5.9□□□□□ -1.46
IGHV3-54-201ENST00000622166 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
IGHV3-54-201ENST00000622166 DYNC2H1Q8NCM8 4307 aaKnown RBP5.9□□□□□ -1.47
IGHV3-54-201ENST00000622166 hDV103S1A0JD37 113 aa5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 H3BPC8 53 aa5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 PANO1I0J062 215 aa5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 RPL37AP61513 92 aaKnown RBP5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 WFDC13Q8IUB5 93 aa5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 SPACA4Q8TDM5 124 aa5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 MDFIQ99750 246 aa5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 NOTCH1P46531 2555 aa5.89□□□□□ -1.47
IGHV3-54-201ENST00000622166 FAM229BQ4G0N7 80 aa5.88□□□□□ -1.47
IGHV3-54-201ENST00000622166 CASC2Q6XLA1 102 aa5.88□□□□□ -1.47
IGHV3-54-201ENST00000622166 NDUFB1O75438 58 aa5.87□□□□□ -1.47
IGHV3-54-201ENST00000622166 MP68P56378 58 aa5.87□□□□□ -1.47
IGHV3-54-201ENST00000622166 LINC00483Q53H64 154 aa5.87□□□□□ -1.47
IGHV3-54-201ENST00000622166 A0A087WTM6 91 aa5.86□□□□□ -1.47
IGHV3-54-201ENST00000622166 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.86□□□□□ -1.47
IGHV3-54-201ENST00000622166 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
IGHV3-54-201ENST00000622166 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.47
IGHV3-54-201ENST00000622166 MMP24-AS1A0A0U1RRL7 71 aa5.84□□□□□ -1.47
IGHV3-54-201ENST00000622166 ZNF706Q9Y5V0 76 aaPredicted RBP5.84□□□□□ -1.47
IGHV3-54-201ENST00000622166 H0Y9P7 68 aa5.83□□□□□ -1.48
IGHV3-54-201ENST00000622166 ASB16-AS1Q495Z4 193 aa5.83□□□□□ -1.48
IGHV3-54-201ENST00000622166 C1orf64Q8NEQ6 169 aa5.83□□□□□ -1.48
IGHV3-54-201ENST00000622166 Q96NJ1 140 aa5.83□□□□□ -1.48
IGHV3-54-201ENST00000622166 Q6ZR54 194 aa5.82□□□□□ -1.48
IGHV3-54-201ENST00000622166 LINC00336Q6ZUF6 198 aa5.82□□□□□ -1.48
IGHV3-54-201ENST00000622166 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
IGHV3-54-201ENST00000622166 LINC00208Q96KT6 92 aa5.82□□□□□ -1.48
IGHV3-54-201ENST00000622166 NBEAL1Q6ZS30 2694 aa5.82□□□□□ -1.48
IGHV3-54-201ENST00000622166 COL6A5A8TX70 2615 aa5.82□□□□□ -1.48
IGHV3-54-201ENST00000622166 PLAC8Q9NZF1 115 aa5.81□□□□□ -1.48
IGHV3-54-201ENST00000622166 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
IGHV3-54-201ENST00000622166 IGLV5-52A0A0A0MRZ9 124 aa5.8□□□□□ -1.48
IGHV3-54-201ENST00000622166 RTL8CO15255 209 aa5.8□□□□□ -1.48
IGHV3-54-201ENST00000622166 Q1T7F1 81 aa5.8□□□□□ -1.48
IGHV3-54-201ENST00000622166 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
IGHV3-54-201ENST00000622166 MOBPQ13875 183 aa5.79□□□□□ -1.48
IGHV3-54-201ENST00000622166 MPLKIPQ8TAP9 179 aa5.79□□□□□ -1.48
IGHV3-54-201ENST00000622166 WWC2-AS2Q96NR7 200 aa5.79□□□□□ -1.48
IGHV3-54-201ENST00000622166 PSORS1C2Q9UIG4 136 aa5.79□□□□□ -1.48
IGHV3-54-201ENST00000622166 ZNF861PO60384 105 aa5.78□□□□□ -1.48
IGHV3-54-201ENST00000622166 TP53AIP1Q9HCN2 124 aa5.78□□□□□ -1.48
IGHV3-54-201ENST00000622166 C8orf17Q9NRJ1 99 aa5.78□□□□□ -1.48
IGHV3-54-201ENST00000622166 DNAH10Q8IVF4 4471 aa5.77□□□□□ -1.49
IGHV3-54-201ENST00000622166 STAB2Q8WWQ8 2551 aa5.76□□□□□ -1.49
IGHV3-54-201ENST00000622166 VPS13DQ5THJ4 4388 aa5.75□□□□□ -1.49
IGHV3-54-201ENST00000622166 A0A1B0GVX0 72 aa5.75□□□□□ -1.49
IGHV3-54-201ENST00000622166 MGAM2Q2M2H8 2515 aa5.75□□□□□ -1.49
IGHV3-54-201ENST00000622166 COL7A1Q02388 2944 aa5.74□□□□□ -1.49
IGHV3-54-201ENST00000622166 PRR4Q16378 134 aa5.74□□□□□ -1.49
IGHV3-54-201ENST00000622166 V9GYY9 64 aa5.73□□□□□ -1.49
IGHV3-54-201ENST00000622166 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
IGHV3-54-201ENST00000622166 C1orf134Q5TEV5 83 aa5.72□□□□□ -1.49
IGHV3-54-201ENST00000622166 CDK2AP2O75956 126 aa5.71□□□□□ -1.5
IGHV3-54-201ENST00000622166 IGLV7-43P04211 117 aa5.71□□□□□ -1.5
IGHV3-54-201ENST00000622166 CD164Q04900 197 aa5.71□□□□□ -1.5
IGHV3-54-201ENST00000622166 MRPL34Q9BQ48 92 aaKnown RBP5.71□□□□□ -1.5
IGHV3-54-201ENST00000622166 BRK1Q8WUW1 75 aa5.7□□□□□ -1.5
IGHV3-54-201ENST00000622166 DNAH17Q9UFH2 4485 aa5.7□□□□□ -1.5
IGHV3-54-201ENST00000622166 IGHV6-1A0A0B4J1U7 121 aa5.69□□□□□ -1.5
IGHV3-54-201ENST00000622166 ANAPC11Q9NYG5 84 aa5.69□□□□□ -1.5
IGHV3-54-201ENST00000622166 PLECQ15149 4684 aaKnown RBP5.68□□□□□ -1.5
IGHV3-54-201ENST00000622166 C1orf195Q5TG92 126 aa5.68□□□□□ -1.5
IGHV3-54-201ENST00000622166 SSBP3-AS1Q7Z2R9 100 aa5.68□□□□□ -1.5
IGHV3-54-201ENST00000622166 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
IGHV3-54-201ENST00000622166 A0A087X002 238 aa5.65□□□□□ -1.5
IGHV3-54-201ENST00000622166 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
IGHV3-54-201ENST00000622166 COA5Q86WW8 74 aa5.65□□□□□ -1.5
IGHV3-54-201ENST00000622166 LIMD2Q9BT23 127 aa5.65□□□□□ -1.5
IGHV3-54-201ENST00000622166 C8orf87E5RJ46 101 aa5.64□□□□□ -1.51
IGHV3-54-201ENST00000622166 NDUFS5O43920 106 aa5.64□□□□□ -1.51
IGHV3-54-201ENST00000622166 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
IGHV3-54-201ENST00000622166 A8MUN3 132 aa5.63□□□□□ -1.51
IGHV3-54-201ENST00000622166 PSPHP1O15172 72 aa5.63□□□□□ -1.51
IGHV3-54-201ENST00000622166 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
IGHV3-54-201ENST00000622166 PCOTHQ58A44 107 aa5.63□□□□□ -1.51
IGHV3-54-201ENST00000622166 LOC101927531A0A1B0GV80 90 aa5.62□□□□□ -1.51
IGHV3-54-201ENST00000622166 Q5VV11 94 aa5.62□□□□□ -1.51
IGHV3-54-201ENST00000622166 DNAH7Q8WXX0 4024 aa5.62□□□□□ -1.51
IGHV3-54-201ENST00000622166 TENM2Q9NT68 2774 aa5.61□□□□□ -1.51
IGHV3-54-201ENST00000622166 CSMD3Q7Z407 3707 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms