RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 PRR26Q8N8Z3 221 aa7.63□□□□□ -1.19
SCAMP1-207ENST00000621999 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
SCAMP1-207ENST00000621999 Q6ZVQ6 151 aa7.62□□□□□ -1.19
SCAMP1-207ENST00000621999 MT-ATP8P03928 68 aa7.62□□□□□ -1.19
SCAMP1-207ENST00000621999 WFDC13Q8IUB5 93 aa7.62□□□□□ -1.19
SCAMP1-207ENST00000621999 SSBP3-AS1Q7Z2R9 100 aa7.61□□□□□ -1.19
SCAMP1-207ENST00000621999 KRTAP4-16G5E9R7 235 aaPredicted RBP7.6□□□□□ -1.19
SCAMP1-207ENST00000621999 IGHV6-1A0A0B4J1U7 121 aa7.6□□□□□ -1.19
SCAMP1-207ENST00000621999 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
SCAMP1-207ENST00000621999 FAM240AA0A1B0GVK7 77 aa7.6□□□□□ -1.19
SCAMP1-207ENST00000621999 LOC110117498A0A087WWA1 95 aa7.6□□□□□ -1.19
SCAMP1-207ENST00000621999 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
SCAMP1-207ENST00000621999 ANAPC13Q9BS18 74 aa7.59□□□□□ -1.19
SCAMP1-207ENST00000621999 FAM236AA0A1B0GUQ0 79 aa7.58□□□□□ -1.2
SCAMP1-207ENST00000621999 FAM236BA0A1B0GV22 79 aa7.58□□□□□ -1.2
SCAMP1-207ENST00000621999 Q8N9L7 120 aa7.58□□□□□ -1.2
SCAMP1-207ENST00000621999 TRBV7-4A0A0J9YYF1 115 aa7.57□□□□□ -1.2
SCAMP1-207ENST00000621999 ATP5EP2Q5VTU8 51 aa7.57□□□□□ -1.2
SCAMP1-207ENST00000621999 CMYA5Q8N3K9 4069 aa7.56□□□□□ -1.2
SCAMP1-207ENST00000621999 A0A1W2PNM2 257 aa7.55□□□□□ -1.2
SCAMP1-207ENST00000621999 Q6ZSA8 131 aa7.55□□□□□ -1.2
SCAMP1-207ENST00000621999 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
SCAMP1-207ENST00000621999 A0A087WVE0 104 aa7.53□□□□□ -1.2
SCAMP1-207ENST00000621999 PRR4Q16378 134 aa7.52□□□□□ -1.21
SCAMP1-207ENST00000621999 J3KT08 172 aa7.51□□□□□ -1.21
SCAMP1-207ENST00000621999 TRBV7-7A0A0K0K1E9 115 aa7.51□□□□□ -1.21
SCAMP1-207ENST00000621999 PCP4P48539 62 aa7.51□□□□□ -1.21
SCAMP1-207ENST00000621999 SMIM29Q86T20 159 aa7.51□□□□□ -1.21
SCAMP1-207ENST00000621999 SPAG11AQ6PDA7 123 aa7.51□□□□□ -1.21
SCAMP1-207ENST00000621999 FAM229BQ4G0N7 80 aa7.5□□□□□ -1.21
SCAMP1-207ENST00000621999 PLECQ15149 4684 aaKnown RBP7.5□□□□□ -1.21
SCAMP1-207ENST00000621999 SRRM2Q9UQ35 2752 aaKnown RBP7.5□□□□□ -1.21
SCAMP1-207ENST00000621999 A0A1B0GW54 56 aa7.5□□□□□ -1.21
SCAMP1-207ENST00000621999 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
SCAMP1-207ENST00000621999 SPRR1BP22528 89 aa7.49□□□□□ -1.21
SCAMP1-207ENST00000621999 CDIP1Q9H305 208 aa7.48□□□□□ -1.21
SCAMP1-207ENST00000621999 A0A087X002 238 aa7.47□□□□□ -1.21
SCAMP1-207ENST00000621999 DNAH3Q8TD57 4116 aa7.47□□□□□ -1.21
SCAMP1-207ENST00000621999 SPINK1P00995 79 aa7.46□□□□□ -1.22
SCAMP1-207ENST00000621999 RETNLBQ9BQ08 111 aa7.46□□□□□ -1.22
SCAMP1-207ENST00000621999 CASC2Q6XLA1 102 aa7.46□□□□□ -1.22
SCAMP1-207ENST00000621999 OBSCN-AS1Q96MR7 158 aa7.45□□□□□ -1.22
SCAMP1-207ENST00000621999 ATOX1O00244 68 aa7.45□□□□□ -1.22
SCAMP1-207ENST00000621999 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
SCAMP1-207ENST00000621999 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
SCAMP1-207ENST00000621999 MP68P56378 58 aa7.44□□□□□ -1.22
SCAMP1-207ENST00000621999 STARD9Q9P2P6 4700 aa7.44□□□□□ -1.22
SCAMP1-207ENST00000621999 CXCL6P80162 114 aa7.43□□□□□ -1.22
SCAMP1-207ENST00000621999 IMUPQ9GZP8 106 aa7.42□□□□□ -1.22
SCAMP1-207ENST00000621999 Q8N1X5 172 aa7.42□□□□□ -1.22
SCAMP1-207ENST00000621999 LINC00483Q53H64 154 aa7.41□□□□□ -1.22
SCAMP1-207ENST00000621999 K7EQZ3 153 aa7.41□□□□□ -1.22
SCAMP1-207ENST00000621999 HCG22E2RYF7 251 aa7.4□□□□□ -1.22
SCAMP1-207ENST00000621999 C9orf92A6NGG3 77 aa7.4□□□□□ -1.22
SCAMP1-207ENST00000621999 LINC00313P59037 77 aa7.4□□□□□ -1.22
SCAMP1-207ENST00000621999 LINC01600Q96MT4 127 aa7.4□□□□□ -1.23
SCAMP1-207ENST00000621999 Q96NJ1 140 aa7.39□□□□□ -1.23
SCAMP1-207ENST00000621999 IGLV8-61A0A075B6I0 122 aa7.38□□□□□ -1.23
SCAMP1-207ENST00000621999 hDV103S1A0JD37 113 aa7.38□□□□□ -1.23
SCAMP1-207ENST00000621999 A8MWP4 228 aa7.38□□□□□ -1.23
SCAMP1-207ENST00000621999 CD164Q04900 197 aa7.38□□□□□ -1.23
SCAMP1-207ENST00000621999 DSCR10P59022 87 aa7.37□□□□□ -1.23
SCAMP1-207ENST00000621999 SMIM20Q8N5G0 67 aa7.36□□□□□ -1.23
SCAMP1-207ENST00000621999 C20orf197Q8N268 126 aa7.35□□□□□ -1.23
SCAMP1-207ENST00000621999 KRTAP13-2Q52LG2 175 aa7.34□□□□□ -1.23
SCAMP1-207ENST00000621999 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
SCAMP1-207ENST00000621999 A0A1B0GVX0 72 aa7.32□□□□□ -1.24
SCAMP1-207ENST00000621999 Q6Q795 121 aa7.31□□□□□ -1.24
SCAMP1-207ENST00000621999 IGLV7-46A0A075B6I9 117 aa7.3□□□□□ -1.24
SCAMP1-207ENST00000621999 C8orf17Q9NRJ1 99 aa7.3□□□□□ -1.24
SCAMP1-207ENST00000621999 LINC00208Q96KT6 92 aa7.29□□□□□ -1.24
SCAMP1-207ENST00000621999 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
SCAMP1-207ENST00000621999 SNURFQ9Y675 71 aa7.28□□□□□ -1.24
SCAMP1-207ENST00000621999 C8orf87E5RJ46 101 aa7.28□□□□□ -1.24
SCAMP1-207ENST00000621999 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
SCAMP1-207ENST00000621999 KRTAP1-4P0C5Y4 121 aa7.27□□□□□ -1.25
SCAMP1-207ENST00000621999 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
SCAMP1-207ENST00000621999 IGKV2D-30A0A075B6S6 120 aa7.26□□□□□ -1.25
SCAMP1-207ENST00000621999 IGKV2-30P06310 120 aa7.26□□□□□ -1.25
SCAMP1-207ENST00000621999 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
SCAMP1-207ENST00000621999 DNAH1Q9P2D7 4330 aa7.25□□□□□ -1.25
SCAMP1-207ENST00000621999 DNAH10Q8IVF4 4471 aa7.25□□□□□ -1.25
SCAMP1-207ENST00000621999 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
SCAMP1-207ENST00000621999 TRAV7A0A075B6U4 112 aa7.24□□□□□ -1.25
SCAMP1-207ENST00000621999 H0Y9P7 68 aa7.24□□□□□ -1.25
SCAMP1-207ENST00000621999 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
SCAMP1-207ENST00000621999 ALMS1Q8TCU4 4167 aa7.23□□□□□ -1.25
SCAMP1-207ENST00000621999 KMT2AQ03164 3969 aa7.22□□□□□ -1.25
SCAMP1-207ENST00000621999 UQCRQO14949 82 aa7.22□□□□□ -1.25
SCAMP1-207ENST00000621999 PCOTHQ58A44 107 aa7.22□□□□□ -1.25
SCAMP1-207ENST00000621999 OXTP01178 125 aa7.21□□□□□ -1.26
SCAMP1-207ENST00000621999 COX7CP15954 63 aa7.2□□□□□ -1.26
SCAMP1-207ENST00000621999 TP53AIP1Q9HCN2 124 aa7.2□□□□□ -1.26
SCAMP1-207ENST00000621999 LYSTQ99698 3801 aa7.19□□□□□ -1.26
SCAMP1-207ENST00000621999 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
SCAMP1-207ENST00000621999 C1orf64Q8NEQ6 169 aa7.17□□□□□ -1.26
SCAMP1-207ENST00000621999 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
SCAMP1-207ENST00000621999 TRAV22A0A0B4J277 110 aa7.16□□□□□ -1.26
SCAMP1-207ENST00000621999 CCDC179H3BU77 68 aa7.16□□□□□ -1.26
SCAMP1-207ENST00000621999 DNAH11Q96DT5 4516 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms