RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 MUSTN1Q8IVN3 82 aa6.44□□□□□ -1.38
UPF3B-204ENST00000619445 Q6JHZ5 121 aa6.42□□□□□ -1.38
UPF3B-204ENST00000619445 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
UPF3B-204ENST00000619445 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
UPF3B-204ENST00000619445 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
UPF3B-204ENST00000619445 PCP2Q8IVA1 136 aa6.41□□□□□ -1.38
UPF3B-204ENST00000619445 ATOH7Q8N100 152 aa6.4□□□□□ -1.39
UPF3B-204ENST00000619445 HSBP1L1C9JCN9 74 aa6.39□□□□□ -1.39
UPF3B-204ENST00000619445 MT1HP80294 61 aa6.39□□□□□ -1.39
UPF3B-204ENST00000619445 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
UPF3B-204ENST00000619445 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
UPF3B-204ENST00000619445 hADV29S1A0JD25 119 aa6.37□□□□□ -1.39
UPF3B-204ENST00000619445 CLEC2BQ92478 149 aa6.37□□□□□ -1.39
UPF3B-204ENST00000619445 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
UPF3B-204ENST00000619445 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
UPF3B-204ENST00000619445 SCGB1D1O95968 90 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 Q6ZQY7 126 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 SVIPQ8NHG7 77 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
UPF3B-204ENST00000619445 S100A2P29034 98 aa6.34□□□□□ -1.39
UPF3B-204ENST00000619445 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.34□□□□□ -1.39
UPF3B-204ENST00000619445 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
UPF3B-204ENST00000619445 M0R2T5 61 aa6.33□□□□□ -1.4
UPF3B-204ENST00000619445 SNCGO76070 127 aa6.33□□□□□ -1.4
UPF3B-204ENST00000619445 OCIAD2Q56VL3 154 aa6.33□□□□□ -1.4
UPF3B-204ENST00000619445 SNHG12Q9BXW3 62 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
UPF3B-204ENST00000619445 IGFL1Q6UW32 110 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 HIST1H2BLQ99880 126 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 SS18L2Q9UHA2 77 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 Q75L30 129 aa6.3□□□□□ -1.4
UPF3B-204ENST00000619445 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
UPF3B-204ENST00000619445 LST1O00453 97 aa6.29□□□□□ -1.4
UPF3B-204ENST00000619445 HIST1H4GQ99525 98 aa6.29□□□□□ -1.4
UPF3B-204ENST00000619445 C12orf57Q99622 126 aa6.29□□□□□ -1.4
UPF3B-204ENST00000619445 S100A6P06703 90 aa6.27□□□□□ -1.41
UPF3B-204ENST00000619445 OBSCN-AS1Q96MR7 158 aa6.27□□□□□ -1.41
UPF3B-204ENST00000619445 FLGP20930 4061 aaPredicted RBP6.26□□□□□ -1.41
UPF3B-204ENST00000619445 Q6Q795 121 aa6.26□□□□□ -1.41
UPF3B-204ENST00000619445 H0YGX0 51 aa6.25□□□□□ -1.41
UPF3B-204ENST00000619445 DLEU1O43261 78 aa6.24□□□□□ -1.41
UPF3B-204ENST00000619445 COX8AP10176 69 aa6.23□□□□□ -1.41
UPF3B-204ENST00000619445 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
UPF3B-204ENST00000619445 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
UPF3B-204ENST00000619445 H3BUT2 72 aa6.21□□□□□ -1.41
UPF3B-204ENST00000619445 Q96NJ1 140 aa6.21□□□□□ -1.41
UPF3B-204ENST00000619445 A0A1B0GX51 115 aa6.2□□□□□ -1.42
UPF3B-204ENST00000619445 A0A0B4J2C4 111 aa6.19□□□□□ -1.42
UPF3B-204ENST00000619445 S100A1P23297 94 aa6.19□□□□□ -1.42
UPF3B-204ENST00000619445 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
UPF3B-204ENST00000619445 C20orf166-AS1Q96NR2 134 aa6.19□□□□□ -1.42
UPF3B-204ENST00000619445 HIGD1BQ9P298 99 aa6.19□□□□□ -1.42
UPF3B-204ENST00000619445 TRBV20-1A0A075B6N2 111 aa6.18□□□□□ -1.42
UPF3B-204ENST00000619445 CFC1P0CG37 223 aa6.18□□□□□ -1.42
UPF3B-204ENST00000619445 A8MUU9 505 aa6.17□□□□□ -1.42
UPF3B-204ENST00000619445 A0A087WSZ3 146 aa6.16□□□□□ -1.42
UPF3B-204ENST00000619445 H3BMG7 143 aa6.16□□□□□ -1.42
UPF3B-204ENST00000619445 H3BQ85 93 aa6.16□□□□□ -1.42
UPF3B-204ENST00000619445 FABP2P12104 132 aa6.14□□□□□ -1.43
UPF3B-204ENST00000619445 PRO1854Q9UHT4 67 aa6.14□□□□□ -1.43
UPF3B-204ENST00000619445 C14orf144Q96I85 54 aa6.13□□□□□ -1.43
UPF3B-204ENST00000619445 SPATA45Q537H7 98 aa6.12□□□□□ -1.43
UPF3B-204ENST00000619445 FAM218AQ96MZ4 157 aa6.12□□□□□ -1.43
UPF3B-204ENST00000619445 VAMP8Q9BV40 100 aa6.12□□□□□ -1.43
UPF3B-204ENST00000619445 DNAL4O96015 105 aa6.11□□□□□ -1.43
UPF3B-204ENST00000619445 CEND1Q8N111 149 aa6.11□□□□□ -1.43
UPF3B-204ENST00000619445 SIGMAR1Q99720 223 aa6.11□□□□□ -1.43
UPF3B-204ENST00000619445 PAM16Q9Y3D7 125 aa6.11□□□□□ -1.43
UPF3B-204ENST00000619445 TRBV7-4A0A0J9YYF1 115 aa6.1□□□□□ -1.43
UPF3B-204ENST00000619445 LINC00313P59037 77 aa6.09□□□□□ -1.43
UPF3B-204ENST00000619445 ANKRD29Q8N6D5 301 aa6.09□□□□□ -1.43
UPF3B-204ENST00000619445 C2orf91Q6ZV80 131 aa6.08□□□□□ -1.44
UPF3B-204ENST00000619445 ORMDL1Q9P0S3 153 aa6.08□□□□□ -1.44
UPF3B-204ENST00000619445 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
UPF3B-204ENST00000619445 TMEM256-PLSCR3K7ERE1 68 aa6.07□□□□□ -1.44
UPF3B-204ENST00000619445 DSCR10P59022 87 aa6.07□□□□□ -1.44
UPF3B-204ENST00000619445 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
UPF3B-204ENST00000619445 COX6CP09669 75 aa6.06□□□□□ -1.44
UPF3B-204ENST00000619445 TRIAP1O43715 76 aa6.06□□□□□ -1.44
UPF3B-204ENST00000619445 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
UPF3B-204ENST00000619445 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
UPF3B-204ENST00000619445 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
UPF3B-204ENST00000619445 PSMB2P49721 201 aa6.04□□□□□ -1.44
UPF3B-204ENST00000619445 FXYD2P54710 66 aa6.04□□□□□ -1.44
UPF3B-204ENST00000619445 TRACP01848 142 aa6.03□□□□□ -1.44
UPF3B-204ENST00000619445 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
UPF3B-204ENST00000619445 CCKP06307 115 aa6.02□□□□□ -1.45
UPF3B-204ENST00000619445 HSD52Q0P140 79 aa6.02□□□□□ -1.45
UPF3B-204ENST00000619445 KRTAP16-1A8MUX0 517 aa6.01□□□□□ -1.45
UPF3B-204ENST00000619445 UBE2V1Q13404 147 aa6.01□□□□□ -1.45
UPF3B-204ENST00000619445 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
UPF3B-204ENST00000619445 C8orf87E5RJ46 101 aa6□□□□□ -1.45
UPF3B-204ENST00000619445 MTURNQ8N3F0 131 aa5.99□□□□□ -1.45
UPF3B-204ENST00000619445 IGHV6-1A0A0B4J1U7 121 aa5.98□□□□□ -1.45
UPF3B-204ENST00000619445 MPLKIPQ8TAP9 179 aa5.98□□□□□ -1.45
UPF3B-204ENST00000619445 C9orf118A6NHY6 69 aa5.96□□□□□ -1.45
UPF3B-204ENST00000619445 J3KT08 172 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms