RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 GAGE2AQ6NT46 116 aa10.39□□□□□ -0.75
TRAPPC3-210ENST00000617904 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
TRAPPC3-210ENST00000617904 HERC1Q15751 4861 aa10.39□□□□□ -0.75
TRAPPC3-210ENST00000617904 PSORS1C2Q9UIG4 136 aa10.38□□□□□ -0.75
TRAPPC3-210ENST00000617904 VPS13BQ7Z7G8 4022 aa10.38□□□□□ -0.75
TRAPPC3-210ENST00000617904 LOC110117498A0A087WWA1 95 aa10.37□□□□□ -0.75
TRAPPC3-210ENST00000617904 Q8N377 158 aa10.37□□□□□ -0.75
TRAPPC3-210ENST00000617904 CCKP06307 115 aa10.36□□□□□ -0.75
TRAPPC3-210ENST00000617904 A0A1B0GV72 72 aa10.35□□□□□ -0.75
TRAPPC3-210ENST00000617904 Q5VSD8 79 aa10.35□□□□□ -0.75
TRAPPC3-210ENST00000617904 SCXQ7RTU7 201 aa10.35□□□□□ -0.75
TRAPPC3-210ENST00000617904 ERC2-IT1O76042 136 aa10.34□□□□□ -0.75
TRAPPC3-210ENST00000617904 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
TRAPPC3-210ENST00000617904 ZNF861PO60384 105 aa10.33□□□□□ -0.76
TRAPPC3-210ENST00000617904 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
TRAPPC3-210ENST00000617904 FAM30AQ9NZY2 134 aa10.33□□□□□ -0.76
TRAPPC3-210ENST00000617904 SMR3BP02814 79 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC3-210ENST00000617904 LINC01547P58512 204 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC3-210ENST00000617904 KRTAP13-1Q8IUC0 172 aa10.32□□□□□ -0.76
TRAPPC3-210ENST00000617904 IGLV7-43P04211 117 aa10.31□□□□□ -0.76
TRAPPC3-210ENST00000617904 SPRR1BP22528 89 aa10.31□□□□□ -0.76
TRAPPC3-210ENST00000617904 TRBV7-4A0A0J9YYF1 115 aa10.3□□□□□ -0.76
TRAPPC3-210ENST00000617904 A0A1B0GW54 56 aa10.3□□□□□ -0.76
TRAPPC3-210ENST00000617904 Q6ZQT0 140 aa10.3□□□□□ -0.76
TRAPPC3-210ENST00000617904 HAMPP81172 84 aa10.29□□□□□ -0.76
TRAPPC3-210ENST00000617904 DMBT1Q9UGM3 2413 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC3-210ENST00000617904 DNAH8Q96JB1 4490 aa10.28□□□□□ -0.76
TRAPPC3-210ENST00000617904 Q6JHZ5 121 aa10.27□□□□□ -0.77
TRAPPC3-210ENST00000617904 UBL5Q9BZL1 73 aa10.27□□□□□ -0.77
TRAPPC3-210ENST00000617904 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC3-210ENST00000617904 MYCBP2O75592 4640 aa10.26□□□□□ -0.77
TRAPPC3-210ENST00000617904 SIGMAR1Q99720 223 aa10.26□□□□□ -0.77
TRAPPC3-210ENST00000617904 SPRR4Q96PI1 79 aa10.25□□□□□ -0.77
TRAPPC3-210ENST00000617904 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
TRAPPC3-210ENST00000617904 LINC00643Q86TS7 51 aa10.23□□□□□ -0.77
TRAPPC3-210ENST00000617904 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
TRAPPC3-210ENST00000617904 RPL37AP61513 92 aaKnown RBP10.22□□□□□ -0.77
TRAPPC3-210ENST00000617904 C3orf22Q8N5N4 141 aa10.22□□□□□ -0.77
TRAPPC3-210ENST00000617904 SMIM29Q86T20 159 aa10.21□□□□□ -0.78
TRAPPC3-210ENST00000617904 CDIP1Q9H305 208 aa10.21□□□□□ -0.78
TRAPPC3-210ENST00000617904 LINC00483Q53H64 154 aa10.2□□□□□ -0.78
TRAPPC3-210ENST00000617904 SRRM2Q9UQ35 2752 aaKnown RBP10.2□□□□□ -0.78
TRAPPC3-210ENST00000617904 C9orf153Q5TBE3 101 aa10.17□□□□□ -0.78
TRAPPC3-210ENST00000617904 ATP5EP2Q5VTU8 51 aa10.17□□□□□ -0.78
TRAPPC3-210ENST00000617904 Q8NBF4 154 aa10.17□□□□□ -0.78
TRAPPC3-210ENST00000617904 LINC00846Q9NV44 126 aa10.17□□□□□ -0.78
TRAPPC3-210ENST00000617904 NREPQ16612 68 aa10.13□□□□□ -0.79
TRAPPC3-210ENST00000617904 IGLV9-49A0A0B4J1Y8 123 aa10.12□□□□□ -0.79
TRAPPC3-210ENST00000617904 J3QL48 77 aa10.12□□□□□ -0.79
TRAPPC3-210ENST00000617904 IGFL1Q6UW32 110 aa10.12□□□□□ -0.79
TRAPPC3-210ENST00000617904 IMUPQ9GZP8 106 aa10.12□□□□□ -0.79
TRAPPC3-210ENST00000617904 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
TRAPPC3-210ENST00000617904 CRYGAP11844 174 aa10.1□□□□□ -0.79
TRAPPC3-210ENST00000617904 FAM229BQ4G0N7 80 aa10.1□□□□□ -0.79
TRAPPC3-210ENST00000617904 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
TRAPPC3-210ENST00000617904 Q6Q795 121 aa10.09□□□□□ -0.79
TRAPPC3-210ENST00000617904 KRTAP29-1A8MX34 341 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC3-210ENST00000617904 Q6ZVQ6 151 aa10.08□□□□□ -0.8
TRAPPC3-210ENST00000617904 A0A1W2PNM2 257 aa10.07□□□□□ -0.8
TRAPPC3-210ENST00000617904 MT-ATP8P03928 68 aa10.07□□□□□ -0.8
TRAPPC3-210ENST00000617904 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
TRAPPC3-210ENST00000617904 TRBV7-7A0A0K0K1E9 115 aa10.07□□□□□ -0.8
TRAPPC3-210ENST00000617904 SCGB1A1P11684 91 aa10.07□□□□□ -0.8
TRAPPC3-210ENST00000617904 MOBPQ13875 183 aa10.07□□□□□ -0.8
TRAPPC3-210ENST00000617904 SS18L2Q9UHA2 77 aa10.06□□□□□ -0.8
TRAPPC3-210ENST00000617904 KRTAP10-4P60372 401 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC3-210ENST00000617904 CXCL6P80162 114 aa10.05□□□□□ -0.8
TRAPPC3-210ENST00000617904 BPY2O14599 106 aa10.02□□□□□ -0.81
TRAPPC3-210ENST00000617904 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
TRAPPC3-210ENST00000617904 A0A087WSZ3 146 aa10.01□□□□□ -0.81
TRAPPC3-210ENST00000617904 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
TRAPPC3-210ENST00000617904 CD164Q04900 197 aa10.01□□□□□ -0.81
TRAPPC3-210ENST00000617904 HIST1H4AP62805 103 aaKnown RBP9.99□□□□□ -0.81
TRAPPC3-210ENST00000617904 FAT3Q8TDW7 4589 aa9.98□□□□□ -0.81
TRAPPC3-210ENST00000617904 ANAPC11Q9NYG5 84 aa9.98□□□□□ -0.81
TRAPPC3-210ENST00000617904 PKHD1L1Q86WI1 4243 aa9.97□□□□□ -0.81
TRAPPC3-210ENST00000617904 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
TRAPPC3-210ENST00000617904 J3KT08 172 aa9.95□□□□□ -0.82
TRAPPC3-210ENST00000617904 OXTP01178 125 aa9.95□□□□□ -0.82
TRAPPC3-210ENST00000617904 HMCN2Q8NDA2 5059 aa9.94□□□□□ -0.82
TRAPPC3-210ENST00000617904 A0A0G2JQZ4 141 aa9.93□□□□□ -0.82
TRAPPC3-210ENST00000617904 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
TRAPPC3-210ENST00000617904 HRCT1Q6UXD1 115 aa9.91□□□□□ -0.82
TRAPPC3-210ENST00000617904 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
TRAPPC3-210ENST00000617904 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
TRAPPC3-210ENST00000617904 NDUFB1O75438 58 aa9.88□□□□□ -0.83
TRAPPC3-210ENST00000617904 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
TRAPPC3-210ENST00000617904 A0A087X002 238 aa9.86□□□□□ -0.83
TRAPPC3-210ENST00000617904 FAM236AA0A1B0GUQ0 79 aa9.85□□□□□ -0.83
TRAPPC3-210ENST00000617904 FAM236BA0A1B0GV22 79 aa9.85□□□□□ -0.83
TRAPPC3-210ENST00000617904 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
TRAPPC3-210ENST00000617904 ATOX1O00244 68 aa9.83□□□□□ -0.84
TRAPPC3-210ENST00000617904 SPINK1P00995 79 aa9.82□□□□□ -0.84
TRAPPC3-210ENST00000617904 UBR4Q5T4S7 5183 aa9.82□□□□□ -0.84
TRAPPC3-210ENST00000617904 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
TRAPPC3-210ENST00000617904 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
TRAPPC3-210ENST00000617904 IGKV4-1P06312 121 aa9.81□□□□□ -0.84
TRAPPC3-210ENST00000617904 Q5XG85 94 aa9.81□□□□□ -0.84
TRAPPC3-210ENST00000617904 SMIM20Q8N5G0 67 aa9.81□□□□□ -0.84
TRAPPC3-210ENST00000617904 ANAPC13Q9BS18 74 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms