RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PRR3P79522 188 aaKnown RBP5.48□□□□□ -1.53
GPC6-202ENST00000617456 Q6ZRP5 223 aa5.48□□□□□ -1.53
GPC6-202ENST00000617456 IGKV3D-7A0A0C4DH55 119 aa5.47□□□□□ -1.53
GPC6-202ENST00000617456 MGPP08493 103 aa5.47□□□□□ -1.53
GPC6-202ENST00000617456 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
GPC6-202ENST00000617456 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
GPC6-202ENST00000617456 SOSTDC1Q6X4U4 206 aa5.47□□□□□ -1.53
GPC6-202ENST00000617456 C20orf203Q8NBC4 194 aa5.47□□□□□ -1.53
GPC6-202ENST00000617456 LINC00846Q9NV44 126 aa5.47□□□□□ -1.53
GPC6-202ENST00000617456 TRBV6-5A0A0K0K1A5 114 aa5.46□□□□□ -1.54
GPC6-202ENST00000617456 PPP1R17O96001 155 aa5.45□□□□□ -1.54
GPC6-202ENST00000617456 TMEM141Q96I45 108 aa5.45□□□□□ -1.54
GPC6-202ENST00000617456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
GPC6-202ENST00000617456 TRAV22A0A0B4J277 110 aa5.44□□□□□ -1.54
GPC6-202ENST00000617456 PANO1I0J062 215 aa5.44□□□□□ -1.54
GPC6-202ENST00000617456 CLEC2BQ92478 149 aa5.44□□□□□ -1.54
GPC6-202ENST00000617456 IGLV4-69A0A075B6H9 119 aa5.43□□□□□ -1.54
GPC6-202ENST00000617456 IGLV4-60A0A075B6I1 120 aa5.43□□□□□ -1.54
GPC6-202ENST00000617456 LITAFQ99732 161 aa5.43□□□□□ -1.54
GPC6-202ENST00000617456 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
GPC6-202ENST00000617456 TRAV23DV6A0A075B6W5 121 aa5.42□□□□□ -1.54
GPC6-202ENST00000617456 PSPHP1O15172 72 aa5.42□□□□□ -1.54
GPC6-202ENST00000617456 IGLV10-54A0A075B6I4 117 aa5.41□□□□□ -1.54
GPC6-202ENST00000617456 H7C2G1 150 aa5.41□□□□□ -1.54
GPC6-202ENST00000617456 POLR2KP53803 58 aaKnown RBP5.41□□□□□ -1.54
GPC6-202ENST00000617456 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
GPC6-202ENST00000617456 CLPSL2Q6UWE3 100 aa5.41□□□□□ -1.54
GPC6-202ENST00000617456 LIMD2Q9BT23 127 aa5.41□□□□□ -1.54
GPC6-202ENST00000617456 SMIM2Q9BVW6 85 aa5.41□□□□□ -1.54
GPC6-202ENST00000617456 A0A087WZ39 114 aa5.4□□□□□ -1.54
GPC6-202ENST00000617456 GVQW2A0A096LPI5 108 aaPredicted RBP5.4□□□□□ -1.54
GPC6-202ENST00000617456 Q5VV11 94 aa5.4□□□□□ -1.54
GPC6-202ENST00000617456 Q75L30 129 aa5.4□□□□□ -1.54
GPC6-202ENST00000617456 TMEM254Q8TBM7 123 aa5.4□□□□□ -1.54
GPC6-202ENST00000617456 RPL39LQ96EH5 51 aaKnown RBP5.4□□□□□ -1.54
GPC6-202ENST00000617456 PRYO14603 147 aa5.39□□□□□ -1.55
GPC6-202ENST00000617456 GAS8-AS1O95177 125 aa5.39□□□□□ -1.55
GPC6-202ENST00000617456 SLPIP03973 132 aa5.39□□□□□ -1.55
GPC6-202ENST00000617456 C15orf56Q8N910 161 aa5.39□□□□□ -1.55
GPC6-202ENST00000617456 CHCHD10Q8WYQ3 142 aaPredicted RBP5.39□□□□□ -1.55
GPC6-202ENST00000617456 PLAC8Q9NZF1 115 aa5.39□□□□□ -1.55
GPC6-202ENST00000617456 NDUFA12Q9UI09 145 aa5.39□□□□□ -1.55
GPC6-202ENST00000617456 SNURFQ9Y675 71 aa5.39□□□□□ -1.55
GPC6-202ENST00000617456 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
GPC6-202ENST00000617456 SPACA4Q8TDM5 124 aa5.38□□□□□ -1.55
GPC6-202ENST00000617456 CDC42SE2Q9NRR3 84 aa5.38□□□□□ -1.55
GPC6-202ENST00000617456 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
GPC6-202ENST00000617456 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.37□□□□□ -1.55
GPC6-202ENST00000617456 A0A087WYN8 130 aa5.37□□□□□ -1.55
GPC6-202ENST00000617456 IGHV6-1A0A0B4J1U7 121 aa5.37□□□□□ -1.55
GPC6-202ENST00000617456 LINC00959A0A1B0GUT2 108 aa5.37□□□□□ -1.55
GPC6-202ENST00000617456 IGKV2-29A2NJV5 120 aaPredicted RBP5.37□□□□□ -1.55
GPC6-202ENST00000617456 TSHBP01222 138 aa5.37□□□□□ -1.55
GPC6-202ENST00000617456 LOC101927531A0A1B0GV80 90 aa5.36□□□□□ -1.55
GPC6-202ENST00000617456 HCG22E2RYF7 251 aa5.36□□□□□ -1.55
GPC6-202ENST00000617456 JMJD7-PLA2G4BH0Y9G9 81 aa5.36□□□□□ -1.55
GPC6-202ENST00000617456 SUMO2P61956 95 aaKnown RBP5.36□□□□□ -1.55
GPC6-202ENST00000617456 C2orf66Q6UXQ4 117 aa5.36□□□□□ -1.55
GPC6-202ENST00000617456 C7orf33Q8WU49 177 aa5.36□□□□□ -1.55
GPC6-202ENST00000617456 UBL5Q9BZL1 73 aa5.36□□□□□ -1.55
GPC6-202ENST00000617456 A0A1B0GW54 56 aa5.35□□□□□ -1.55
GPC6-202ENST00000617456 COX6A2Q02221 97 aa5.35□□□□□ -1.55
GPC6-202ENST00000617456 C6orf99Q4VX62 202 aa5.35□□□□□ -1.55
GPC6-202ENST00000617456 H0YGX0 51 aa5.34□□□□□ -1.55
GPC6-202ENST00000617456 IGKV3OR2-268A0A0C4DH90 116 aa5.33□□□□□ -1.56
GPC6-202ENST00000617456 A0A0J9YXV3 536 aa5.33□□□□□ -1.56
GPC6-202ENST00000617456 ELOF1P60002 83 aaKnown RBP5.33□□□□□ -1.56
GPC6-202ENST00000617456 NREPQ16612 68 aa5.32□□□□□ -1.56
GPC6-202ENST00000617456 HIGD2BQ4VC39 106 aa5.32□□□□□ -1.56
GPC6-202ENST00000617456 C9orf116Q5BN46 136 aaPredicted RBP5.32□□□□□ -1.56
GPC6-202ENST00000617456 C1orf64Q8NEQ6 169 aa5.32□□□□□ -1.56
GPC6-202ENST00000617456 LINC00167Q96N53 147 aa5.32□□□□□ -1.56
GPC6-202ENST00000617456 IGKV2-24A0A0C4DH68 120 aa5.31□□□□□ -1.56
GPC6-202ENST00000617456 KRTAP10-8P60410 259 aa5.31□□□□□ -1.56
GPC6-202ENST00000617456 ZNF625Q96I27 306 aaPredicted RBP5.31□□□□□ -1.56
GPC6-202ENST00000617456 REG3GQ6UW15 175 aa5.3□□□□□ -1.56
GPC6-202ENST00000617456 SPINK6Q6UWN8 80 aa5.3□□□□□ -1.56
GPC6-202ENST00000617456 C14orf132Q9NPU4 83 aa5.3□□□□□ -1.56
GPC6-202ENST00000617456 A0A096LNI7 61 aa5.29□□□□□ -1.56
GPC6-202ENST00000617456 OCR1Q9BZK8 76 aa5.29□□□□□ -1.56
GPC6-202ENST00000617456 LPAP08519 4548 aa5.29□□□□□ -1.56
GPC6-202ENST00000617456 CHKB-CPT1BH3BT56 60 aa5.28□□□□□ -1.56
GPC6-202ENST00000617456 PDE6GP18545 87 aa5.28□□□□□ -1.56
GPC6-202ENST00000617456 LOC110117498A0A087WWA1 95 aa5.27□□□□□ -1.57
GPC6-202ENST00000617456 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
GPC6-202ENST00000617456 MOBPQ13875 183 aa5.27□□□□□ -1.57
GPC6-202ENST00000617456 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
GPC6-202ENST00000617456 ZCCHC13Q8WW36 166 aaKnown RBP5.27□□□□□ -1.57
GPC6-202ENST00000617456 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
GPC6-202ENST00000617456 LINC01547P58512 204 aaPredicted RBP5.26□□□□□ -1.57
GPC6-202ENST00000617456 SPTSSBQ8NFR3 76 aa5.26□□□□□ -1.57
GPC6-202ENST00000617456 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
GPC6-202ENST00000617456 FAM218AQ96MZ4 157 aa5.26□□□□□ -1.57
GPC6-202ENST00000617456 Q9BRP9 147 aa5.26□□□□□ -1.57
GPC6-202ENST00000617456 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
GPC6-202ENST00000617456 A8MU10 97 aa5.25□□□□□ -1.57
GPC6-202ENST00000617456 H3BQ85 93 aa5.24□□□□□ -1.57
GPC6-202ENST00000617456 NDUFA1O15239 70 aa5.24□□□□□ -1.57
GPC6-202ENST00000617456 RPL39P62891 51 aaKnown RBP5.24□□□□□ -1.57
GPC6-202ENST00000617456 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms