RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
FOXN3-219ENST00000615335 ETDCA0A1B0GVM5 59 aa8.5□□□□□ -1.05
FOXN3-219ENST00000615335 ELOF1P60002 83 aaKnown RBP8.5□□□□□ -1.05
FOXN3-219ENST00000615335 A6NN06 94 aa8.49□□□□□ -1.05
FOXN3-219ENST00000615335 HCG22E2RYF7 251 aa8.49□□□□□ -1.05
FOXN3-219ENST00000615335 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
FOXN3-219ENST00000615335 DNAH1Q9P2D7 4330 aa8.49□□□□□ -1.05
FOXN3-219ENST00000615335 A0A1B0GW54 56 aa8.49□□□□□ -1.05
FOXN3-219ENST00000615335 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
FOXN3-219ENST00000615335 A8MU10 97 aa8.48□□□□□ -1.05
FOXN3-219ENST00000615335 LY6G6CO95867 125 aa8.48□□□□□ -1.05
FOXN3-219ENST00000615335 C7orf65Q6ZTY9 151 aa8.48□□□□□ -1.05
FOXN3-219ENST00000615335 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.46□□□□□ -1.06
FOXN3-219ENST00000615335 VPS13DQ5THJ4 4388 aa8.45□□□□□ -1.06
FOXN3-219ENST00000615335 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
FOXN3-219ENST00000615335 KRTAP1-5Q9BYS1 174 aa8.45□□□□□ -1.06
FOXN3-219ENST00000615335 IGKV2D-24A0A075B6R9 120 aa8.45□□□□□ -1.06
FOXN3-219ENST00000615335 Q75L30 129 aa8.45□□□□□ -1.06
FOXN3-219ENST00000615335 Q8N9P0 234 aaPredicted RBP8.45□□□□□ -1.06
FOXN3-219ENST00000615335 NBDYA0A0U1RRE5 68 aa8.44□□□□□ -1.06
FOXN3-219ENST00000615335 LINC00476Q8WZB0 136 aa8.44□□□□□ -1.06
FOXN3-219ENST00000615335 KMT2AQ03164 3969 aa8.43□□□□□ -1.06
FOXN3-219ENST00000615335 LCA10Q71F78 164 aa8.43□□□□□ -1.06
FOXN3-219ENST00000615335 PRR15LQ9BU68 103 aa8.43□□□□□ -1.06
FOXN3-219ENST00000615335 VPREB1P12018 145 aa8.42□□□□□ -1.06
FOXN3-219ENST00000615335 KRTAP26-1Q6PEX3 210 aa8.42□□□□□ -1.06
FOXN3-219ENST00000615335 Q9BRP9 147 aa8.42□□□□□ -1.06
FOXN3-219ENST00000615335 C8orf87E5RJ46 101 aa8.41□□□□□ -1.06
FOXN3-219ENST00000615335 SPANXA2-OT1Q8N9U9 137 aa8.41□□□□□ -1.06
FOXN3-219ENST00000615335 CDC42SE1Q9NRR8 79 aa8.41□□□□□ -1.06
FOXN3-219ENST00000615335 PRR4Q16378 134 aa8.4□□□□□ -1.06
FOXN3-219ENST00000615335 A6NED7 52 aa8.4□□□□□ -1.07
FOXN3-219ENST00000615335 C15orf56Q8N910 161 aa8.4□□□□□ -1.07
FOXN3-219ENST00000615335 LINC00208Q96KT6 92 aa8.4□□□□□ -1.07
FOXN3-219ENST00000615335 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
FOXN3-219ENST00000615335 MP68P56378 58 aa8.38□□□□□ -1.07
FOXN3-219ENST00000615335 ALMS1Q8TCU4 4167 aa8.37□□□□□ -1.07
FOXN3-219ENST00000615335 DNAH10Q8IVF4 4471 aa8.36□□□□□ -1.07
FOXN3-219ENST00000615335 Q6ZR54 194 aa8.36□□□□□ -1.07
FOXN3-219ENST00000615335 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
FOXN3-219ENST00000615335 ST20-AS1Q8NBB2 130 aa8.35□□□□□ -1.07
FOXN3-219ENST00000615335 KCNQ1DNQ9H478 68 aa8.35□□□□□ -1.07
FOXN3-219ENST00000615335 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
FOXN3-219ENST00000615335 H3BPC8 53 aa8.33□□□□□ -1.08
FOXN3-219ENST00000615335 NKAPP1Q8N9T2 125 aa8.33□□□□□ -1.08
FOXN3-219ENST00000615335 HYDINQ4G0P3 5121 aa8.32□□□□□ -1.08
FOXN3-219ENST00000615335 C1orf134Q5TEV5 83 aa8.32□□□□□ -1.08
FOXN3-219ENST00000615335 DNAH2Q9P225 4427 aa8.31□□□□□ -1.08
FOXN3-219ENST00000615335 H3BS24 57 aa8.31□□□□□ -1.08
FOXN3-219ENST00000615335 Q6ZRN7 208 aaPredicted RBP8.31□□□□□ -1.08
FOXN3-219ENST00000615335 DNAH6Q9C0G6 4158 aa8.3□□□□□ -1.08
FOXN3-219ENST00000615335 DSCR10P59022 87 aa8.29□□□□□ -1.08
FOXN3-219ENST00000615335 MOBPQ13875 183 aa8.29□□□□□ -1.08
FOXN3-219ENST00000615335 SACSQ9NZJ4 4579 aa8.28□□□□□ -1.08
FOXN3-219ENST00000615335 K7EQZ3 153 aa8.27□□□□□ -1.09
FOXN3-219ENST00000615335 SERTAD4-AS1Q5TG53 156 aa8.27□□□□□ -1.09
FOXN3-219ENST00000615335 C7orf33Q8WU49 177 aa8.27□□□□□ -1.09
FOXN3-219ENST00000615335 A0A1W2PNM2 257 aa8.25□□□□□ -1.09
FOXN3-219ENST00000615335 Q8NBF4 154 aa8.25□□□□□ -1.09
FOXN3-219ENST00000615335 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
FOXN3-219ENST00000615335 KMT2CQ8NEZ4 4911 aaKnown RBP8.25□□□□□ -1.09
FOXN3-219ENST00000615335 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
FOXN3-219ENST00000615335 DEFB105AQ8NG35 78 aa8.24□□□□□ -1.09
FOXN3-219ENST00000615335 TLX1NBP0CAT3 122 aa8.24□□□□□ -1.09
FOXN3-219ENST00000615335 Q8N377 158 aa8.23□□□□□ -1.09
FOXN3-219ENST00000615335 A0A087WTM6 91 aa8.23□□□□□ -1.09
FOXN3-219ENST00000615335 PLA2G2DQ9UNK4 145 aa8.23□□□□□ -1.09
FOXN3-219ENST00000615335 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
FOXN3-219ENST00000615335 C1orf137Q5JT78 98 aa8.22□□□□□ -1.09
FOXN3-219ENST00000615335 RTL8CO15255 209 aa8.22□□□□□ -1.09
FOXN3-219ENST00000615335 COA5Q86WW8 74 aa8.22□□□□□ -1.09
FOXN3-219ENST00000615335 DHRS4-AS1Q9P1J3 65 aa8.21□□□□□ -1.09
FOXN3-219ENST00000615335 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.1
FOXN3-219ENST00000615335 RPL37AP8A6NKH3 93 aa8.21□□□□□ -1.1
FOXN3-219ENST00000615335 TNP2Q05952 138 aa8.21□□□□□ -1.1
FOXN3-219ENST00000615335 H0Y9P7 68 aa8.2□□□□□ -1.1
FOXN3-219ENST00000615335 Q6ZRX8 168 aa8.2□□□□□ -1.1
FOXN3-219ENST00000615335 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
FOXN3-219ENST00000615335 DNAH17Q9UFH2 4485 aa8.2□□□□□ -1.1
FOXN3-219ENST00000615335 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
FOXN3-219ENST00000615335 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
FOXN3-219ENST00000615335 CASC2Q6XLA1 102 aa8.19□□□□□ -1.1
FOXN3-219ENST00000615335 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
FOXN3-219ENST00000615335 IGLV1-50A0A075B6I6 118 aa8.19□□□□□ -1.1
FOXN3-219ENST00000615335 CNBPP62633 177 aaKnown RBP8.18□□□□□ -1.1
FOXN3-219ENST00000615335 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
FOXN3-219ENST00000615335 LINC01554Q52M75 96 aa8.18□□□□□ -1.1
FOXN3-219ENST00000615335 RYR2Q92736 4967 aa8.17□□□□□ -1.1
FOXN3-219ENST00000615335 SPRR1AP35321 89 aa8.17□□□□□ -1.1
FOXN3-219ENST00000615335 LINC00313P59037 77 aa8.17□□□□□ -1.1
FOXN3-219ENST00000615335 IGLV7-46A0A075B6I9 117 aa8.16□□□□□ -1.1
FOXN3-219ENST00000615335 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
FOXN3-219ENST00000615335 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.11
FOXN3-219ENST00000615335 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
FOXN3-219ENST00000615335 WFDC13Q8IUB5 93 aa8.14□□□□□ -1.11
FOXN3-219ENST00000615335 HECTD4Q9Y4D8 3996 aa8.13□□□□□ -1.11
FOXN3-219ENST00000615335 IGLV5-52A0A0A0MRZ9 124 aa8.12□□□□□ -1.11
FOXN3-219ENST00000615335 A0A087X002 238 aa8.12□□□□□ -1.11
FOXN3-219ENST00000615335 KRTAP29-1A8MX34 341 aaPredicted RBP8.12□□□□□ -1.11
FOXN3-219ENST00000615335 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms