RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 SMIM29Q86T20 159 aa11.93□□□□□ -0.5
MMP28-204ENST00000615136 SPRR4Q96PI1 79 aa11.93□□□□□ -0.5
MMP28-204ENST00000615136 HYDINQ4G0P3 5121 aa11.93□□□□□ -0.5
MMP28-204ENST00000615136 DNAH6Q9C0G6 4158 aa11.93□□□□□ -0.5
MMP28-204ENST00000615136 BPY2O14599 106 aa11.93□□□□□ -0.5
MMP28-204ENST00000615136 C20orf197Q8N268 126 aa11.93□□□□□ -0.5
MMP28-204ENST00000615136 Q8N9L7 120 aa11.91□□□□□ -0.5
MMP28-204ENST00000615136 SRRM2Q9UQ35 2752 aaKnown RBP11.9□□□□□ -0.5
MMP28-204ENST00000615136 RTL8CO15255 209 aa11.9□□□□□ -0.5
MMP28-204ENST00000615136 C1orf134Q5TEV5 83 aa11.9□□□□□ -0.5
MMP28-204ENST00000615136 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
MMP28-204ENST00000615136 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
MMP28-204ENST00000615136 DPH3Q96FX2 82 aa11.89□□□□□ -0.51
MMP28-204ENST00000615136 LINC00474Q9P2X8 69 aa11.89□□□□□ -0.51
MMP28-204ENST00000615136 J3KT08 172 aa11.87□□□□□ -0.51
MMP28-204ENST00000615136 KLKP1Q107X0 134 aa11.87□□□□□ -0.51
MMP28-204ENST00000615136 HIGD2AQ9BW72 106 aa11.87□□□□□ -0.51
MMP28-204ENST00000615136 ALMS1Q8TCU4 4167 aa11.87□□□□□ -0.51
MMP28-204ENST00000615136 FRAS1Q86XX4 4008 aa11.87□□□□□ -0.51
MMP28-204ENST00000615136 PKIGQ9Y2B9 76 aa11.86□□□□□ -0.51
MMP28-204ENST00000615136 F8WEM9 126 aa11.86□□□□□ -0.51
MMP28-204ENST00000615136 RPS28P62857 69 aaKnown RBP11.86□□□□□ -0.51
MMP28-204ENST00000615136 DNAH8Q96JB1 4490 aa11.84□□□□□ -0.51
MMP28-204ENST00000615136 EPM2AB3EWF7 344 aa11.84□□□□□ -0.51
MMP28-204ENST00000615136 IGLV8-61A0A075B6I0 122 aa11.83□□□□□ -0.52
MMP28-204ENST00000615136 DNAH11Q96DT5 4516 aa11.83□□□□□ -0.52
MMP28-204ENST00000615136 H0Y9J4 135 aa11.82□□□□□ -0.52
MMP28-204ENST00000615136 H7BZZ5 65 aa11.81□□□□□ -0.52
MMP28-204ENST00000615136 IGFL1Q6UW32 110 aa11.81□□□□□ -0.52
MMP28-204ENST00000615136 DNAH5Q8TE73 4624 aa11.8□□□□□ -0.52
MMP28-204ENST00000615136 IGLV5-52A0A0A0MRZ9 124 aa11.8□□□□□ -0.52
MMP28-204ENST00000615136 OCR1Q9BZK8 76 aa11.79□□□□□ -0.52
MMP28-204ENST00000615136 A0A0G2JQZ4 141 aa11.78□□□□□ -0.52
MMP28-204ENST00000615136 SPRR1BP22528 89 aa11.77□□□□□ -0.53
MMP28-204ENST00000615136 SNURFQ9Y675 71 aa11.77□□□□□ -0.53
MMP28-204ENST00000615136 UBE2AP49459 152 aa11.76□□□□□ -0.53
MMP28-204ENST00000615136 DSCR10P59022 87 aa11.76□□□□□ -0.53
MMP28-204ENST00000615136 KRTAP13-1Q8IUC0 172 aa11.76□□□□□ -0.53
MMP28-204ENST00000615136 FAT2Q9NYQ8 4349 aa11.75□□□□□ -0.53
MMP28-204ENST00000615136 FAM236DA0A1B0GTK5 79 aa11.74□□□□□ -0.53
MMP28-204ENST00000615136 FAM236CP0DP71 79 aa11.74□□□□□ -0.53
MMP28-204ENST00000615136 KRTAP10-2P60368 255 aa11.74□□□□□ -0.53
MMP28-204ENST00000615136 TMEM254Q8TBM7 123 aa11.72□□□□□ -0.53
MMP28-204ENST00000615136 PKD1P98161 4303 aa11.72□□□□□ -0.53
MMP28-204ENST00000615136 NDUFC1O43677 76 aa11.72□□□□□ -0.53
MMP28-204ENST00000615136 PLAC8Q9NZF1 115 aa11.72□□□□□ -0.53
MMP28-204ENST00000615136 K7EQZ3 153 aa11.7□□□□□ -0.54
MMP28-204ENST00000615136 OXTP01178 125 aa11.7□□□□□ -0.54
MMP28-204ENST00000615136 PSORS1C2Q9UIG4 136 aa11.69□□□□□ -0.54
MMP28-204ENST00000615136 A0A087WSZ3 146 aa11.67□□□□□ -0.54
MMP28-204ENST00000615136 FAM30AQ9NZY2 134 aa11.67□□□□□ -0.54
MMP28-204ENST00000615136 SACSQ9NZJ4 4579 aa11.66□□□□□ -0.54
MMP28-204ENST00000615136 A0A0U1RQV1 116 aa11.66□□□□□ -0.54
MMP28-204ENST00000615136 LCE6AA0A183 80 aa11.64□□□□□ -0.55
MMP28-204ENST00000615136 HCG22E2RYF7 251 aa11.62□□□□□ -0.55
MMP28-204ENST00000615136 SERP1Q9Y6X1 66 aa11.6□□□□□ -0.55
MMP28-204ENST00000615136 ATP5EP56381 51 aaPredicted RBP11.6□□□□□ -0.55
MMP28-204ENST00000615136 DEFB116Q30KQ4 102 aa11.58□□□□□ -0.56
MMP28-204ENST00000615136 CIRBP-AS1Q8TBR5 109 aa11.58□□□□□ -0.56
MMP28-204ENST00000615136 KRTAP10-1P60331 282 aa11.57□□□□□ -0.56
MMP28-204ENST00000615136 C5orf47Q569G3 176 aa11.57□□□□□ -0.56
MMP28-204ENST00000615136 LRP1BQ9NZR2 4599 aa11.54□□□□□ -0.56
MMP28-204ENST00000615136 ZNF861PO60384 105 aa11.53□□□□□ -0.56
MMP28-204ENST00000615136 LINC00472Q9H8W2 130 aa11.53□□□□□ -0.56
MMP28-204ENST00000615136 ANAPC11Q9NYG5 84 aa11.53□□□□□ -0.56
MMP28-204ENST00000615136 LINC00483Q53H64 154 aa11.52□□□□□ -0.57
MMP28-204ENST00000615136 IGLV9-49A0A0B4J1Y8 123 aa11.51□□□□□ -0.57
MMP28-204ENST00000615136 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
MMP28-204ENST00000615136 Q6ZSA8 131 aa11.5□□□□□ -0.57
MMP28-204ENST00000615136 KRTAP29-1A8MX34 341 aaPredicted RBP11.49□□□□□ -0.57
MMP28-204ENST00000615136 ZCCHC13Q8WW36 166 aaKnown RBP11.49□□□□□ -0.57
MMP28-204ENST00000615136 PKHD1P08F94 4074 aa11.49□□□□□ -0.57
MMP28-204ENST00000615136 A8MWP4 228 aa11.48□□□□□ -0.57
MMP28-204ENST00000615136 IGLV7-43P04211 117 aa11.48□□□□□ -0.57
MMP28-204ENST00000615136 Q5XG85 94 aa11.48□□□□□ -0.57
MMP28-204ENST00000615136 PRR15Q8IV56 129 aa11.48□□□□□ -0.57
MMP28-204ENST00000615136 WFDC13Q8IUB5 93 aa11.48□□□□□ -0.57
MMP28-204ENST00000615136 KMT2CQ8NEZ4 4911 aaKnown RBP11.47□□□□□ -0.57
MMP28-204ENST00000615136 ZNF706Q9Y5V0 76 aaPredicted RBP11.47□□□□□ -0.57
MMP28-204ENST00000615136 CASC2Q6XLA1 102 aa11.42□□□□□ -0.58
MMP28-204ENST00000615136 RYR2Q92736 4967 aa11.41□□□□□ -0.58
MMP28-204ENST00000615136 MOBPQ13875 183 aa11.4□□□□□ -0.58
MMP28-204ENST00000615136 Q96NJ1 140 aa11.39□□□□□ -0.59
MMP28-204ENST00000615136 SMIM26A0A096LP01 95 aa11.38□□□□□ -0.59
MMP28-204ENST00000615136 HRCT1Q6UXD1 115 aa11.38□□□□□ -0.59
MMP28-204ENST00000615136 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
MMP28-204ENST00000615136 C4orf26Q17RF5 130 aa11.37□□□□□ -0.59
MMP28-204ENST00000615136 MMP24-AS1A0A0U1RRL7 71 aa11.35□□□□□ -0.59
MMP28-204ENST00000615136 MP68P56378 58 aa11.35□□□□□ -0.59
MMP28-204ENST00000615136 FP248Q71RG6 208 aaPredicted RBP11.35□□□□□ -0.59
MMP28-204ENST00000615136 DYNC1H1Q14204 4646 aaKnown RBP11.34□□□□□ -0.59
MMP28-204ENST00000615136 NDUFB1O75438 58 aa11.33□□□□□ -0.6
MMP28-204ENST00000615136 LINC00336Q6ZUF6 198 aa11.33□□□□□ -0.6
MMP28-204ENST00000615136 H3BPC8 53 aa11.3□□□□□ -0.6
MMP28-204ENST00000615136 ASB16-AS1Q495Z4 193 aa11.29□□□□□ -0.6
MMP28-204ENST00000615136 TRAV22A0A0B4J277 110 aa11.28□□□□□ -0.6
MMP28-204ENST00000615136 H0Y9P7 68 aa11.28□□□□□ -0.6
MMP28-204ENST00000615136 FAM229BQ4G0N7 80 aa11.28□□□□□ -0.6
MMP28-204ENST00000615136 hDV103S1A0JD37 113 aa11.27□□□□□ -0.61
MMP28-204ENST00000615136 LINC00208Q96KT6 92 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms