RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TRAV22A0A0B4J277 110 aa7.66□□□□□ -1.18
CDH5-208ENST00000614547 B9D2Q9BPU9 175 aa7.66□□□□□ -1.18
CDH5-208ENST00000614547 NDUFB1O75438 58 aa7.65□□□□□ -1.19
CDH5-208ENST00000614547 Q9BRP9 147 aa7.65□□□□□ -1.19
CDH5-208ENST00000614547 hDV103S1A0JD37 113 aa7.64□□□□□ -1.19
CDH5-208ENST00000614547 IGLV9-49A0A0B4J1Y8 123 aa7.64□□□□□ -1.19
CDH5-208ENST00000614547 KCNQ1DNQ9H478 68 aa7.64□□□□□ -1.19
CDH5-208ENST00000614547 ANK3Q12955 4377 aaKnown RBP7.63□□□□□ -1.19
CDH5-208ENST00000614547 DSCR10P59022 87 aa7.62□□□□□ -1.19
CDH5-208ENST00000614547 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
CDH5-208ENST00000614547 IGLV1-50A0A075B6I6 118 aa7.59□□□□□ -1.19
CDH5-208ENST00000614547 LINC01556Q5JQF7 62 aa7.59□□□□□ -1.19
CDH5-208ENST00000614547 CHTF8P0CG12 524 aa7.59□□□□□ -1.19
CDH5-208ENST00000614547 IGFL1Q6UW32 110 aa7.59□□□□□ -1.19
CDH5-208ENST00000614547 SPAG11AQ6PDA7 123 aa7.58□□□□□ -1.2
CDH5-208ENST00000614547 IGLV5-48A0A075B6I7 105 aa7.58□□□□□ -1.2
CDH5-208ENST00000614547 CSMD3Q7Z407 3707 aa7.57□□□□□ -1.2
CDH5-208ENST00000614547 KRTAP10-11P60412 298 aa7.57□□□□□ -1.2
CDH5-208ENST00000614547 A8MU10 97 aa7.55□□□□□ -1.2
CDH5-208ENST00000614547 PHF5AQ7RTV0 110 aaKnown RBP7.55□□□□□ -1.2
CDH5-208ENST00000614547 IGHV6-1A0A0B4J1U7 121 aa7.55□□□□□ -1.2
CDH5-208ENST00000614547 MDFIQ99750 246 aa7.54□□□□□ -1.2
CDH5-208ENST00000614547 LINC00588Q9Y4M8 146 aa7.54□□□□□ -1.2
CDH5-208ENST00000614547 F8WDY8 70 aa7.54□□□□□ -1.2
CDH5-208ENST00000614547 RETNLBQ9BQ08 111 aa7.51□□□□□ -1.21
CDH5-208ENST00000614547 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
CDH5-208ENST00000614547 COA5Q86WW8 74 aa7.48□□□□□ -1.21
CDH5-208ENST00000614547 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
CDH5-208ENST00000614547 Q1T7F1 81 aa7.48□□□□□ -1.21
CDH5-208ENST00000614547 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
CDH5-208ENST00000614547 SPRR4Q96PI1 79 aa7.45□□□□□ -1.22
CDH5-208ENST00000614547 A0A1B0GW54 56 aa7.45□□□□□ -1.22
CDH5-208ENST00000614547 DNAH10OSP0CZ25 163 aa7.45□□□□□ -1.22
CDH5-208ENST00000614547 H3BNG1 76 aa7.44□□□□□ -1.22
CDH5-208ENST00000614547 KRTAP21-3Q3LHN1 58 aa7.44□□□□□ -1.22
CDH5-208ENST00000614547 A8MWP4 228 aa7.42□□□□□ -1.22
CDH5-208ENST00000614547 Q5VV11 94 aa7.42□□□□□ -1.22
CDH5-208ENST00000614547 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
CDH5-208ENST00000614547 SRRM2Q9UQ35 2752 aaKnown RBP7.42□□□□□ -1.22
CDH5-208ENST00000614547 Q8N9P0 234 aaPredicted RBP7.4□□□□□ -1.22
CDH5-208ENST00000614547 TNP2Q05952 138 aa7.4□□□□□ -1.22
CDH5-208ENST00000614547 CYP4F30PQ9H0H9 118 aa7.4□□□□□ -1.23
CDH5-208ENST00000614547 C16orf90A8MZG2 172 aa7.39□□□□□ -1.23
CDH5-208ENST00000614547 CNBPP62633 177 aaKnown RBP7.39□□□□□ -1.23
CDH5-208ENST00000614547 ZCCHC13Q8WW36 166 aaKnown RBP7.39□□□□□ -1.23
CDH5-208ENST00000614547 TLX1NBP0CAT3 122 aa7.38□□□□□ -1.23
CDH5-208ENST00000614547 MOBPQ13875 183 aa7.38□□□□□ -1.23
CDH5-208ENST00000614547 SPRR1AP35321 89 aa7.37□□□□□ -1.23
CDH5-208ENST00000614547 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
CDH5-208ENST00000614547 K7EIL1 84 aa7.37□□□□□ -1.23
CDH5-208ENST00000614547 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
CDH5-208ENST00000614547 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
CDH5-208ENST00000614547 PLA2G2DQ9UNK4 145 aa7.36□□□□□ -1.23
CDH5-208ENST00000614547 PRR26Q8N8Z3 221 aa7.35□□□□□ -1.23
CDH5-208ENST00000614547 LOC101927531A0A1B0GV80 90 aa7.35□□□□□ -1.23
CDH5-208ENST00000614547 C14orf177Q52M58 125 aa7.34□□□□□ -1.23
CDH5-208ENST00000614547 CD164Q04900 197 aa7.34□□□□□ -1.24
CDH5-208ENST00000614547 KTN1-AS1Q86SY8 53 aa7.33□□□□□ -1.24
CDH5-208ENST00000614547 H3BPC8 53 aa7.32□□□□□ -1.24
CDH5-208ENST00000614547 RBM12B-AS1Q9P1G2 102 aa7.31□□□□□ -1.24
CDH5-208ENST00000614547 IGLV8-61A0A075B6I0 122 aa7.31□□□□□ -1.24
CDH5-208ENST00000614547 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
CDH5-208ENST00000614547 ATP11AUNQ6ZP68 121 aa7.3□□□□□ -1.24
CDH5-208ENST00000614547 C8orf17Q9NRJ1 99 aa7.3□□□□□ -1.24
CDH5-208ENST00000614547 SPINK1P00995 79 aa7.3□□□□□ -1.24
CDH5-208ENST00000614547 LCA10Q71F78 164 aa7.29□□□□□ -1.24
CDH5-208ENST00000614547 SPANXA2-OT1Q8N9U9 137 aa7.29□□□□□ -1.24
CDH5-208ENST00000614547 KRTAP11-1Q8IUC1 163 aa7.29□□□□□ -1.24
CDH5-208ENST00000614547 SPINK7P58062 85 aa7.28□□□□□ -1.24
CDH5-208ENST00000614547 MMP24-AS1A0A0U1RRL7 71 aa7.28□□□□□ -1.24
CDH5-208ENST00000614547 KRTAP1-5Q9BYS1 174 aa7.28□□□□□ -1.24
CDH5-208ENST00000614547 LCE6AA0A183 80 aa7.27□□□□□ -1.25
CDH5-208ENST00000614547 COL7A1Q02388 2944 aa7.27□□□□□ -1.25
CDH5-208ENST00000614547 PRAC1Q96KF2 57 aa7.26□□□□□ -1.25
CDH5-208ENST00000614547 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
CDH5-208ENST00000614547 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
CDH5-208ENST00000614547 LINC00472Q9H8W2 130 aa7.26□□□□□ -1.25
CDH5-208ENST00000614547 MRPL34Q9BQ48 92 aaKnown RBP7.25□□□□□ -1.25
CDH5-208ENST00000614547 IGLV7-46A0A075B6I9 117 aa7.24□□□□□ -1.25
CDH5-208ENST00000614547 LY6G6CO95867 125 aa7.23□□□□□ -1.25
CDH5-208ENST00000614547 ANK2Q01484 3957 aa7.23□□□□□ -1.25
CDH5-208ENST00000614547 IGKV2D-30A0A075B6S6 120 aa7.23□□□□□ -1.25
CDH5-208ENST00000614547 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
CDH5-208ENST00000614547 CDC42SE1Q9NRR8 79 aa7.23□□□□□ -1.25
CDH5-208ENST00000614547 A0A1B0GU69 56 aa7.22□□□□□ -1.25
CDH5-208ENST00000614547 A0A1B0GVX0 72 aa7.22□□□□□ -1.25
CDH5-208ENST00000614547 Q75L30 129 aa7.22□□□□□ -1.25
CDH5-208ENST00000614547 HRES1P13985 223 aa7.21□□□□□ -1.26
CDH5-208ENST00000614547 C7orf65Q6ZTY9 151 aa7.21□□□□□ -1.26
CDH5-208ENST00000614547 PANO1I0J062 215 aa7.2□□□□□ -1.26
CDH5-208ENST00000614547 ZNF706Q9Y5V0 76 aaPredicted RBP7.19□□□□□ -1.26
CDH5-208ENST00000614547 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
CDH5-208ENST00000614547 A0A087X002 238 aa7.18□□□□□ -1.26
CDH5-208ENST00000614547 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
CDH5-208ENST00000614547 ACYP2P14621 99 aa7.18□□□□□ -1.26
CDH5-208ENST00000614547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.17□□□□□ -1.26
CDH5-208ENST00000614547 FBN3Q75N90 2809 aa7.16□□□□□ -1.26
CDH5-208ENST00000614547 MEGF8Q7Z7M0 2845 aa7.15□□□□□ -1.26
CDH5-208ENST00000614547 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.27
CDH5-208ENST00000614547 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms