RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 LINC00336Q6ZUF6 198 aa11.82□□□□□ -0.52
HOXA2-202ENST00000612779 OXTP01178 125 aa11.81□□□□□ -0.52
HOXA2-202ENST00000612779 DSCR8Q96T75 97 aa11.81□□□□□ -0.52
HOXA2-202ENST00000612779 FAM30AQ9NZY2 134 aa11.81□□□□□ -0.52
HOXA2-202ENST00000612779 KRTAP10-1P60331 282 aa11.81□□□□□ -0.52
HOXA2-202ENST00000612779 DHRS4-AS1Q9P1J3 65 aa11.81□□□□□ -0.52
HOXA2-202ENST00000612779 Q6ZSA8 131 aa11.79□□□□□ -0.52
HOXA2-202ENST00000612779 FAM19A1Q7Z5A9 133 aa11.79□□□□□ -0.52
HOXA2-202ENST00000612779 LOC110117498A0A087WWA1 95 aa11.78□□□□□ -0.52
HOXA2-202ENST00000612779 Q6ZQT0 140 aa11.77□□□□□ -0.53
HOXA2-202ENST00000612779 DNAH8Q96JB1 4490 aa11.77□□□□□ -0.53
HOXA2-202ENST00000612779 ERC2-IT1O76042 136 aa11.76□□□□□ -0.53
HOXA2-202ENST00000612779 PRLHP81277 87 aa11.76□□□□□ -0.53
HOXA2-202ENST00000612779 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
HOXA2-202ENST00000612779 H0Y9J4 135 aa11.75□□□□□ -0.53
HOXA2-202ENST00000612779 H3BQ85 93 aa11.75□□□□□ -0.53
HOXA2-202ENST00000612779 CIRBP-AS1Q8TBR5 109 aa11.74□□□□□ -0.53
HOXA2-202ENST00000612779 LINC01547P58512 204 aaPredicted RBP11.74□□□□□ -0.53
HOXA2-202ENST00000612779 RBM3P98179 157 aaKnown RBP11.74□□□□□ -0.53
HOXA2-202ENST00000612779 Q5XG85 94 aa11.74□□□□□ -0.53
HOXA2-202ENST00000612779 TRAV7A0A075B6U4 112 aa11.73□□□□□ -0.53
HOXA2-202ENST00000612779 KRTAP13-1Q8IUC0 172 aa11.72□□□□□ -0.53
HOXA2-202ENST00000612779 SCXQ7RTU7 201 aa11.71□□□□□ -0.53
HOXA2-202ENST00000612779 C20orf197Q8N268 126 aa11.71□□□□□ -0.53
HOXA2-202ENST00000612779 ST20-AS1Q8NBB2 130 aa11.7□□□□□ -0.54
HOXA2-202ENST00000612779 PSORS1C2Q9UIG4 136 aa11.7□□□□□ -0.54
HOXA2-202ENST00000612779 IGLV5-48A0A075B6I7 105 aa11.7□□□□□ -0.54
HOXA2-202ENST00000612779 FAM236DA0A1B0GTK5 79 aa11.7□□□□□ -0.54
HOXA2-202ENST00000612779 FAM236CP0DP71 79 aa11.7□□□□□ -0.54
HOXA2-202ENST00000612779 PDE6GP18545 87 aa11.7□□□□□ -0.54
HOXA2-202ENST00000612779 Q8N377 158 aa11.7□□□□□ -0.54
HOXA2-202ENST00000612779 HIGD2AQ9BW72 106 aa11.68□□□□□ -0.54
HOXA2-202ENST00000612779 UBE2AP49459 152 aa11.67□□□□□ -0.54
HOXA2-202ENST00000612779 CXCL6P80162 114 aa11.67□□□□□ -0.54
HOXA2-202ENST00000612779 KLKP1Q107X0 134 aa11.67□□□□□ -0.54
HOXA2-202ENST00000612779 Q6ZVQ6 151 aa11.67□□□□□ -0.54
HOXA2-202ENST00000612779 DEFB105AQ8NG35 78 aa11.67□□□□□ -0.54
HOXA2-202ENST00000612779 H7BZZ5 65 aa11.66□□□□□ -0.54
HOXA2-202ENST00000612779 C4orf26Q17RF5 130 aa11.66□□□□□ -0.54
HOXA2-202ENST00000612779 LAMTOR3Q9UHA4 124 aa11.66□□□□□ -0.54
HOXA2-202ENST00000612779 SERP1Q9Y6X1 66 aa11.66□□□□□ -0.54
HOXA2-202ENST00000612779 HAMPP81172 84 aa11.64□□□□□ -0.55
HOXA2-202ENST00000612779 PKHD1P08F94 4074 aa11.64□□□□□ -0.55
HOXA2-202ENST00000612779 C1orf137Q5JT78 98 aa11.62□□□□□ -0.55
HOXA2-202ENST00000612779 HRCT1Q6UXD1 115 aa11.61□□□□□ -0.55
HOXA2-202ENST00000612779 SRRM2Q9UQ35 2752 aaKnown RBP11.59□□□□□ -0.55
HOXA2-202ENST00000612779 TRBV7-4A0A0J9YYF1 115 aa11.59□□□□□ -0.55
HOXA2-202ENST00000612779 SMIM29Q86T20 159 aa11.59□□□□□ -0.55
HOXA2-202ENST00000612779 ZNF861PO60384 105 aa11.57□□□□□ -0.56
HOXA2-202ENST00000612779 SPRR1BP22528 89 aa11.57□□□□□ -0.56
HOXA2-202ENST00000612779 LRP1BQ9NZR2 4599 aa11.56□□□□□ -0.56
HOXA2-202ENST00000612779 IGLV7-43P04211 117 aa11.56□□□□□ -0.56
HOXA2-202ENST00000612779 EPPK1P58107 5090 aaKnown RBP11.55□□□□□ -0.56
HOXA2-202ENST00000612779 NDUFC1O43677 76 aa11.55□□□□□ -0.56
HOXA2-202ENST00000612779 DYNC1H1Q14204 4646 aaKnown RBP11.54□□□□□ -0.56
HOXA2-202ENST00000612779 ATP5EP56381 51 aaPredicted RBP11.52□□□□□ -0.57
HOXA2-202ENST00000612779 SPRR4Q96PI1 79 aa11.5□□□□□ -0.57
HOXA2-202ENST00000612779 SNURFQ9Y675 71 aa11.5□□□□□ -0.57
HOXA2-202ENST00000612779 F8WEM9 126 aa11.5□□□□□ -0.57
HOXA2-202ENST00000612779 SMIM26A0A096LP01 95 aa11.49□□□□□ -0.57
HOXA2-202ENST00000612779 LINC00483Q53H64 154 aa11.47□□□□□ -0.57
HOXA2-202ENST00000612779 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
HOXA2-202ENST00000612779 NREPQ16612 68 aa11.45□□□□□ -0.58
HOXA2-202ENST00000612779 ZNF706Q9Y5V0 76 aaPredicted RBP11.45□□□□□ -0.58
HOXA2-202ENST00000612779 FP248Q71RG6 208 aaPredicted RBP11.43□□□□□ -0.58
HOXA2-202ENST00000612779 APOBP04114 4563 aaKnown RBP11.42□□□□□ -0.58
HOXA2-202ENST00000612779 BPY2O14599 106 aa11.41□□□□□ -0.58
HOXA2-202ENST00000612779 PRO0628Q9UI54 55 aa11.41□□□□□ -0.58
HOXA2-202ENST00000612779 A0A1W2PNM2 257 aa11.4□□□□□ -0.58
HOXA2-202ENST00000612779 TMEM254Q8TBM7 123 aa11.4□□□□□ -0.58
HOXA2-202ENST00000612779 IGFL1Q6UW32 110 aa11.39□□□□□ -0.59
HOXA2-202ENST00000612779 BIRC6Q9NR09 4857 aa11.39□□□□□ -0.59
HOXA2-202ENST00000612779 IGKV4-1P06312 121 aa11.39□□□□□ -0.59
HOXA2-202ENST00000612779 VPS13BQ7Z7G8 4022 aa11.38□□□□□ -0.59
HOXA2-202ENST00000612779 A0A0G2JQZ4 141 aa11.37□□□□□ -0.59
HOXA2-202ENST00000612779 Q8NBF4 154 aa11.37□□□□□ -0.59
HOXA2-202ENST00000612779 ANAPC11Q9NYG5 84 aa11.37□□□□□ -0.59
HOXA2-202ENST00000612779 SMR3BP02814 79 aaPredicted RBP11.36□□□□□ -0.59
HOXA2-202ENST00000612779 RPL37AP61513 92 aaKnown RBP11.36□□□□□ -0.59
HOXA2-202ENST00000612779 OCR1Q9BZK8 76 aa11.36□□□□□ -0.59
HOXA2-202ENST00000612779 A0A0U1RQV1 116 aa11.34□□□□□ -0.59
HOXA2-202ENST00000612779 CDK2AP2O75956 126 aa11.33□□□□□ -0.6
HOXA2-202ENST00000612779 IGLV9-49A0A0B4J1Y8 123 aa11.32□□□□□ -0.6
HOXA2-202ENST00000612779 A0A1B0GW54 56 aa11.32□□□□□ -0.6
HOXA2-202ENST00000612779 KRTAP10-4P60372 401 aaPredicted RBP11.32□□□□□ -0.6
HOXA2-202ENST00000612779 Q8N9L7 120 aa11.3□□□□□ -0.6
HOXA2-202ENST00000612779 KRTAP1-4P0C5Y4 121 aa11.28□□□□□ -0.6
HOXA2-202ENST00000612779 MOBPQ13875 183 aa11.27□□□□□ -0.61
HOXA2-202ENST00000612779 SPINK6Q6UWN8 80 aa11.26□□□□□ -0.61
HOXA2-202ENST00000612779 FAM229BQ4G0N7 80 aa11.24□□□□□ -0.61
HOXA2-202ENST00000612779 A0A087X002 238 aa11.23□□□□□ -0.61
HOXA2-202ENST00000612779 FAT1Q14517 4588 aa11.22□□□□□ -0.61
HOXA2-202ENST00000612779 KRTAP13-2Q52LG2 175 aa11.21□□□□□ -0.62
HOXA2-202ENST00000612779 KIAA1109Q2LD37 5005 aa11.2□□□□□ -0.62
HOXA2-202ENST00000612779 A0A087WSZ3 146 aa11.19□□□□□ -0.62
HOXA2-202ENST00000612779 SSBP3-AS1Q7Z2R9 100 aa11.17□□□□□ -0.62
HOXA2-202ENST00000612779 HSPG2P98160 4391 aa11.16□□□□□ -0.62
HOXA2-202ENST00000612779 PLA2G1BP04054 148 aaKnown RBP11.15□□□□□ -0.62
HOXA2-202ENST00000612779 RYR1P21817 5038 aa11.12□□□□□ -0.63
HOXA2-202ENST00000612779 FAM229AH3BQW9 127 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms