RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
CBWD1-220ENST00000612045 NDUFV3P56181 108 aaKnown RBP7.57□□□□□ -1.2
CBWD1-220ENST00000612045 HAMPP81172 84 aa7.57□□□□□ -1.2
CBWD1-220ENST00000612045 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
CBWD1-220ENST00000612045 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
CBWD1-220ENST00000612045 C1orf137Q5JT78 98 aa7.56□□□□□ -1.2
CBWD1-220ENST00000612045 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
CBWD1-220ENST00000612045 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
CBWD1-220ENST00000612045 C3orf22Q8N5N4 141 aa7.53□□□□□ -1.2
CBWD1-220ENST00000612045 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.2
CBWD1-220ENST00000612045 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.2
CBWD1-220ENST00000612045 DSCR8Q96T75 97 aa7.52□□□□□ -1.2
CBWD1-220ENST00000612045 ZNF861PO60384 105 aa7.52□□□□□ -1.21
CBWD1-220ENST00000612045 LOC110117498A0A087WWA1 95 aa7.51□□□□□ -1.21
CBWD1-220ENST00000612045 CCKP06307 115 aa7.51□□□□□ -1.21
CBWD1-220ENST00000612045 VPS25Q9BRG1 176 aa7.51□□□□□ -1.21
CBWD1-220ENST00000612045 TRBV7-4A0A0J9YYF1 115 aa7.5□□□□□ -1.21
CBWD1-220ENST00000612045 SMIM29Q86T20 159 aa7.5□□□□□ -1.21
CBWD1-220ENST00000612045 IGLV7-43P04211 117 aa7.5□□□□□ -1.21
CBWD1-220ENST00000612045 ACYP1P07311 99 aa7.5□□□□□ -1.21
CBWD1-220ENST00000612045 PDE6GP18545 87 aa7.5□□□□□ -1.21
CBWD1-220ENST00000612045 Q6ZQT0 140 aa7.5□□□□□ -1.21
CBWD1-220ENST00000612045 CDIP1Q9H305 208 aa7.5□□□□□ -1.21
CBWD1-220ENST00000612045 FAT1Q14517 4588 aa7.49□□□□□ -1.21
CBWD1-220ENST00000612045 SPRR1BP22528 89 aa7.49□□□□□ -1.21
CBWD1-220ENST00000612045 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
CBWD1-220ENST00000612045 SPRR4Q96PI1 79 aa7.46□□□□□ -1.21
CBWD1-220ENST00000612045 F8WEM9 126 aa7.45□□□□□ -1.22
CBWD1-220ENST00000612045 XGP55808 180 aa7.45□□□□□ -1.22
CBWD1-220ENST00000612045 ZNF706Q9Y5V0 76 aaPredicted RBP7.45□□□□□ -1.22
CBWD1-220ENST00000612045 LINC00483Q53H64 154 aa7.44□□□□□ -1.22
CBWD1-220ENST00000612045 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
CBWD1-220ENST00000612045 C21orf62-AS1Q17RA5 79 aa7.43□□□□□ -1.22
CBWD1-220ENST00000612045 LINC00846Q9NV44 126 aa7.43□□□□□ -1.22
CBWD1-220ENST00000612045 HSPG2P98160 4391 aa7.4□□□□□ -1.22
CBWD1-220ENST00000612045 IGFL1Q6UW32 110 aa7.4□□□□□ -1.23
CBWD1-220ENST00000612045 A0A1W2PNM2 257 aa7.39□□□□□ -1.23
CBWD1-220ENST00000612045 SIGMAR1Q99720 223 aa7.39□□□□□ -1.23
CBWD1-220ENST00000612045 SMR3BP02814 79 aaPredicted RBP7.38□□□□□ -1.23
CBWD1-220ENST00000612045 KRTAP9-9Q9BYP9 154 aa7.38□□□□□ -1.23
CBWD1-220ENST00000612045 KRTAP9-4Q9BYQ2 154 aa7.38□□□□□ -1.23
CBWD1-220ENST00000612045 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
CBWD1-220ENST00000612045 A0A0G2JQZ4 141 aa7.38□□□□□ -1.23
CBWD1-220ENST00000612045 MT-ATP8P03928 68 aa7.38□□□□□ -1.23
CBWD1-220ENST00000612045 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
CBWD1-220ENST00000612045 Q8NBF4 154 aa7.38□□□□□ -1.23
CBWD1-220ENST00000612045 IGLV9-49A0A0B4J1Y8 123 aa7.37□□□□□ -1.23
CBWD1-220ENST00000612045 Q6JHZ5 121 aa7.37□□□□□ -1.23
CBWD1-220ENST00000612045 LINC00643Q86TS7 51 aa7.37□□□□□ -1.23
CBWD1-220ENST00000612045 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
CBWD1-220ENST00000612045 EPPK1P58107 5090 aaKnown RBP7.36□□□□□ -1.23
CBWD1-220ENST00000612045 RYR1P21817 5038 aa7.35□□□□□ -1.23
CBWD1-220ENST00000612045 A0A1B0GW54 56 aa7.35□□□□□ -1.23
CBWD1-220ENST00000612045 C9orf153Q5TBE3 101 aa7.35□□□□□ -1.23
CBWD1-220ENST00000612045 CRYGAP11844 174 aa7.34□□□□□ -1.23
CBWD1-220ENST00000612045 KRTAP4-12Q9BQ66 201 aa7.34□□□□□ -1.23
CBWD1-220ENST00000612045 Q6ZVQ6 151 aa7.33□□□□□ -1.24
CBWD1-220ENST00000612045 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
CBWD1-220ENST00000612045 MOBPQ13875 183 aa7.32□□□□□ -1.24
CBWD1-220ENST00000612045 SPINK6Q6UWN8 80 aa7.31□□□□□ -1.24
CBWD1-220ENST00000612045 KRTAP10-4P60372 401 aaPredicted RBP7.31□□□□□ -1.24
CBWD1-220ENST00000612045 Q6Q795 121 aa7.31□□□□□ -1.24
CBWD1-220ENST00000612045 KRTAP1-4P0C5Y4 121 aa7.3□□□□□ -1.24
CBWD1-220ENST00000612045 IGKV3D-7A0A0C4DH55 119 aa7.29□□□□□ -1.24
CBWD1-220ENST00000612045 CDK2AP2O75956 126 aa7.29□□□□□ -1.24
CBWD1-220ENST00000612045 NREPQ16612 68 aa7.29□□□□□ -1.24
CBWD1-220ENST00000612045 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
CBWD1-220ENST00000612045 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
CBWD1-220ENST00000612045 A0A087WSZ3 146 aa7.28□□□□□ -1.24
CBWD1-220ENST00000612045 A0A087X002 238 aa7.28□□□□□ -1.24
CBWD1-220ENST00000612045 ATP5EP2Q5VTU8 51 aa7.28□□□□□ -1.24
CBWD1-220ENST00000612045 KRTAP4-7Q9BYR0 210 aa7.27□□□□□ -1.25
CBWD1-220ENST00000612045 KIAA1109Q2LD37 5005 aa7.27□□□□□ -1.25
CBWD1-220ENST00000612045 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
CBWD1-220ENST00000612045 IMUPQ9GZP8 106 aa7.26□□□□□ -1.25
CBWD1-220ENST00000612045 PLA2G1BP04054 148 aaKnown RBP7.25□□□□□ -1.25
CBWD1-220ENST00000612045 SSBP3-AS1Q7Z2R9 100 aa7.25□□□□□ -1.25
CBWD1-220ENST00000612045 FAM229AH3BQW9 127 aa7.24□□□□□ -1.25
CBWD1-220ENST00000612045 CXCL6P80162 114 aa7.24□□□□□ -1.25
CBWD1-220ENST00000612045 HRCT1Q6UXD1 115 aa7.24□□□□□ -1.25
CBWD1-220ENST00000612045 BPY2O14599 106 aa7.22□□□□□ -1.25
CBWD1-220ENST00000612045 SCGB1A1P11684 91 aa7.21□□□□□ -1.26
CBWD1-220ENST00000612045 HIST1H4AP62805 103 aaKnown RBP7.2□□□□□ -1.26
CBWD1-220ENST00000612045 CD164Q04900 197 aa7.2□□□□□ -1.26
CBWD1-220ENST00000612045 Q5VSD8 79 aa7.2□□□□□ -1.26
CBWD1-220ENST00000612045 A0A087WVE0 104 aa7.18□□□□□ -1.26
CBWD1-220ENST00000612045 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
CBWD1-220ENST00000612045 DEFB116Q30KQ4 102 aa7.17□□□□□ -1.26
CBWD1-220ENST00000612045 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
CBWD1-220ENST00000612045 TYMSOSQ8TAI1 123 aa7.17□□□□□ -1.26
CBWD1-220ENST00000612045 LINC00472Q9H8W2 130 aa7.17□□□□□ -1.26
CBWD1-220ENST00000612045 TNXBP22105 4242 aa7.16□□□□□ -1.26
CBWD1-220ENST00000612045 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
CBWD1-220ENST00000612045 FAT3Q8TDW7 4589 aa7.16□□□□□ -1.26
CBWD1-220ENST00000612045 Q8N9L7 120 aa7.16□□□□□ -1.26
CBWD1-220ENST00000612045 DSCR10P59022 87 aa7.15□□□□□ -1.26
CBWD1-220ENST00000612045 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
CBWD1-220ENST00000612045 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
CBWD1-220ENST00000612045 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
CBWD1-220ENST00000612045 IGKV4-1P06312 121 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms