RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 OCR1Q9BZK8 76 aa7.01□□□□□ -1.29
PCDHGC3-202ENST00000611950 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7□□□□□ -1.29
PCDHGC3-202ENST00000611950 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
PCDHGC3-202ENST00000611950 KRTAP10-11P60412 298 aa7□□□□□ -1.29
PCDHGC3-202ENST00000611950 IGHV6-1A0A0B4J1U7 121 aa7□□□□□ -1.29
PCDHGC3-202ENST00000611950 PRR15LQ9BU68 103 aa7□□□□□ -1.29
PCDHGC3-202ENST00000611950 COX7BP24311 80 aa6.99□□□□□ -1.29
PCDHGC3-202ENST00000611950 MUC7Q8TAX7 377 aa6.98□□□□□ -1.29
PCDHGC3-202ENST00000611950 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
PCDHGC3-202ENST00000611950 DNAH3Q8TD57 4116 aa6.98□□□□□ -1.29
PCDHGC3-202ENST00000611950 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
PCDHGC3-202ENST00000611950 C15orf56Q8N910 161 aa6.97□□□□□ -1.29
PCDHGC3-202ENST00000611950 B9D2Q9BPU9 175 aa6.97□□□□□ -1.29
PCDHGC3-202ENST00000611950 GVQW2A0A096LPI5 108 aaPredicted RBP6.96□□□□□ -1.29
PCDHGC3-202ENST00000611950 SRRM2Q9UQ35 2752 aaKnown RBP6.96□□□□□ -1.3
PCDHGC3-202ENST00000611950 RPL37AP8A6NKH3 93 aa6.96□□□□□ -1.3
PCDHGC3-202ENST00000611950 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
PCDHGC3-202ENST00000611950 KRTAP26-1Q6PEX3 210 aa6.95□□□□□ -1.3
PCDHGC3-202ENST00000611950 LYSTQ99698 3801 aa6.95□□□□□ -1.3
PCDHGC3-202ENST00000611950 LOC101927531A0A1B0GV80 90 aa6.95□□□□□ -1.3
PCDHGC3-202ENST00000611950 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
PCDHGC3-202ENST00000611950 FAM30AQ9NZY2 134 aa6.95□□□□□ -1.3
PCDHGC3-202ENST00000611950 ELOF1P60002 83 aaKnown RBP6.94□□□□□ -1.3
PCDHGC3-202ENST00000611950 RETNLBQ9BQ08 111 aa6.94□□□□□ -1.3
PCDHGC3-202ENST00000611950 LOC110117498A0A087WWA1 95 aa6.93□□□□□ -1.3
PCDHGC3-202ENST00000611950 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
PCDHGC3-202ENST00000611950 EGFEM1PQ0D2K5 195 aa6.93□□□□□ -1.3
PCDHGC3-202ENST00000611950 H3BNG1 76 aa6.93□□□□□ -1.3
PCDHGC3-202ENST00000611950 CASC10Q5T4H9 136 aa6.93□□□□□ -1.3
PCDHGC3-202ENST00000611950 DEFB131BA0A096LNP1 70 aa6.92□□□□□ -1.3
PCDHGC3-202ENST00000611950 LINC00476Q8WZB0 136 aa6.92□□□□□ -1.3
PCDHGC3-202ENST00000611950 DNAH9Q9NYC9 4486 aa6.91□□□□□ -1.3
PCDHGC3-202ENST00000611950 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
PCDHGC3-202ENST00000611950 LCE6AA0A183 80 aa6.9□□□□□ -1.3
PCDHGC3-202ENST00000611950 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
PCDHGC3-202ENST00000611950 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
PCDHGC3-202ENST00000611950 A0A0G2JQZ4 141 aa6.88□□□□□ -1.31
PCDHGC3-202ENST00000611950 A0A1W2PNN7 141 aa6.88□□□□□ -1.31
PCDHGC3-202ENST00000611950 C7orf33Q8WU49 177 aa6.88□□□□□ -1.31
PCDHGC3-202ENST00000611950 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
PCDHGC3-202ENST00000611950 ST20-AS1Q8NBB2 130 aa6.87□□□□□ -1.31
PCDHGC3-202ENST00000611950 CASC2Q6XLA1 102 aa6.87□□□□□ -1.31
PCDHGC3-202ENST00000611950 DNAH10Q8IVF4 4471 aa6.87□□□□□ -1.31
PCDHGC3-202ENST00000611950 PRR4Q16378 134 aa6.86□□□□□ -1.31
PCDHGC3-202ENST00000611950 LINC01556Q5JQF7 62 aa6.86□□□□□ -1.31
PCDHGC3-202ENST00000611950 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
PCDHGC3-202ENST00000611950 PDE6GP18545 87 aa6.85□□□□□ -1.31
PCDHGC3-202ENST00000611950 Q8N377 158 aa6.85□□□□□ -1.31
PCDHGC3-202ENST00000611950 HUWE1Q7Z6Z7 4374 aaKnown RBP6.83□□□□□ -1.32
PCDHGC3-202ENST00000611950 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
PCDHGC3-202ENST00000611950 Q9BRP9 147 aa6.82□□□□□ -1.32
PCDHGC3-202ENST00000611950 A0A087X002 238 aa6.82□□□□□ -1.32
PCDHGC3-202ENST00000611950 IGKV2-24A0A0C4DH68 120 aa6.82□□□□□ -1.32
PCDHGC3-202ENST00000611950 ETDCA0A1B0GVM5 59 aa6.82□□□□□ -1.32
PCDHGC3-202ENST00000611950 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
PCDHGC3-202ENST00000611950 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
PCDHGC3-202ENST00000611950 C1orf134Q5TEV5 83 aa6.81□□□□□ -1.32
PCDHGC3-202ENST00000611950 DEFB116Q30KQ4 102 aa6.81□□□□□ -1.32
PCDHGC3-202ENST00000611950 LINC00208Q96KT6 92 aa6.8□□□□□ -1.32
PCDHGC3-202ENST00000611950 KRTAP7-1Q8IUC3 87 aa6.8□□□□□ -1.32
PCDHGC3-202ENST00000611950 KCNQ1DNQ9H478 68 aa6.79□□□□□ -1.32
PCDHGC3-202ENST00000611950 RYR2Q92736 4967 aa6.79□□□□□ -1.32
PCDHGC3-202ENST00000611950 H3BQ85 93 aa6.79□□□□□ -1.32
PCDHGC3-202ENST00000611950 Q6ZRX8 168 aa6.78□□□□□ -1.32
PCDHGC3-202ENST00000611950 A0A1W2PNM2 257 aa6.78□□□□□ -1.32
PCDHGC3-202ENST00000611950 C1orf137Q5JT78 98 aa6.78□□□□□ -1.32
PCDHGC3-202ENST00000611950 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
PCDHGC3-202ENST00000611950 NDUFB1O75438 58 aa6.77□□□□□ -1.33
PCDHGC3-202ENST00000611950 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
PCDHGC3-202ENST00000611950 PRLHP81277 87 aa6.77□□□□□ -1.33
PCDHGC3-202ENST00000611950 SPINK7P58062 85 aa6.76□□□□□ -1.33
PCDHGC3-202ENST00000611950 IGLV1-50A0A075B6I6 118 aa6.76□□□□□ -1.33
PCDHGC3-202ENST00000611950 BIRC6Q9NR09 4857 aa6.76□□□□□ -1.33
PCDHGC3-202ENST00000611950 DNAH7Q8WXX0 4024 aa6.75□□□□□ -1.33
PCDHGC3-202ENST00000611950 RTL8CO15255 209 aa6.75□□□□□ -1.33
PCDHGC3-202ENST00000611950 DYNC2H1Q8NCM8 4307 aaKnown RBP6.75□□□□□ -1.33
PCDHGC3-202ENST00000611950 NOTCH2NLQ7Z3S9 236 aa6.75□□□□□ -1.33
PCDHGC3-202ENST00000611950 ROMO1P60602 79 aa6.74□□□□□ -1.33
PCDHGC3-202ENST00000611950 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
PCDHGC3-202ENST00000611950 TLX1NBP0CAT3 122 aa6.74□□□□□ -1.33
PCDHGC3-202ENST00000611950 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
PCDHGC3-202ENST00000611950 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
PCDHGC3-202ENST00000611950 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
PCDHGC3-202ENST00000611950 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
PCDHGC3-202ENST00000611950 IGLV5-48A0A075B6I7 105 aa6.72□□□□□ -1.33
PCDHGC3-202ENST00000611950 A0A096LNI7 61 aa6.72□□□□□ -1.33
PCDHGC3-202ENST00000611950 K7EQZ3 153 aa6.72□□□□□ -1.33
PCDHGC3-202ENST00000611950 DHRS4-AS1Q9P1J3 65 aa6.72□□□□□ -1.33
PCDHGC3-202ENST00000611950 CHTF8P0CG12 524 aa6.72□□□□□ -1.33
PCDHGC3-202ENST00000611950 Q6ZR54 194 aa6.72□□□□□ -1.33
PCDHGC3-202ENST00000611950 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
PCDHGC3-202ENST00000611950 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
PCDHGC3-202ENST00000611950 STARD9Q9P2P6 4700 aa6.7□□□□□ -1.34
PCDHGC3-202ENST00000611950 SPANXA2-OT1Q8N9U9 137 aa6.7□□□□□ -1.34
PCDHGC3-202ENST00000611950 Q8NBF4 154 aa6.7□□□□□ -1.34
PCDHGC3-202ENST00000611950 IGLV5-37A0A075B6J1 123 aa6.69□□□□□ -1.34
PCDHGC3-202ENST00000611950 REG3GQ6UW15 175 aa6.69□□□□□ -1.34
PCDHGC3-202ENST00000611950 SPRR1AP35321 89 aa6.68□□□□□ -1.34
PCDHGC3-202ENST00000611950 RPL37AP61513 92 aaKnown RBP6.68□□□□□ -1.34
PCDHGC3-202ENST00000611950 WFDC13Q8IUB5 93 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms