RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 KRTAP1-5Q9BYS1 174 aa10.31□□□□□ -0.76
RTN1-209ENST00000611068 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
RTN1-209ENST00000611068 NDUFS5O43920 106 aa10.31□□□□□ -0.76
RTN1-209ENST00000611068 PHF5AQ7RTV0 110 aaKnown RBP10.31□□□□□ -0.76
RTN1-209ENST00000611068 XAGE1AQ9HD64 81 aa10.31□□□□□ -0.76
RTN1-209ENST00000611068 ATP11AUNQ6ZP68 121 aa10.3□□□□□ -0.76
RTN1-209ENST00000611068 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
RTN1-209ENST00000611068 DNAH10Q8IVF4 4471 aa10.3□□□□□ -0.76
RTN1-209ENST00000611068 C6orf48Q9UBA6 75 aa10.3□□□□□ -0.76
RTN1-209ENST00000611068 PLECQ15149 4684 aaKnown RBP10.29□□□□□ -0.76
RTN1-209ENST00000611068 C8orf87E5RJ46 101 aa10.29□□□□□ -0.76
RTN1-209ENST00000611068 ETDCA0A1B0GVM5 59 aa10.28□□□□□ -0.76
RTN1-209ENST00000611068 STARD9Q9P2P6 4700 aa10.27□□□□□ -0.76
RTN1-209ENST00000611068 ELOF1P60002 83 aaKnown RBP10.26□□□□□ -0.77
RTN1-209ENST00000611068 DNAH1Q9P2D7 4330 aa10.25□□□□□ -0.77
RTN1-209ENST00000611068 A6NED7 52 aa10.24□□□□□ -0.77
RTN1-209ENST00000611068 H3BS24 57 aa10.23□□□□□ -0.77
RTN1-209ENST00000611068 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
RTN1-209ENST00000611068 LIMD2Q9BT23 127 aa10.23□□□□□ -0.77
RTN1-209ENST00000611068 NUPR2A6NF83 97 aa10.2□□□□□ -0.78
RTN1-209ENST00000611068 K7EQZ3 153 aa10.2□□□□□ -0.78
RTN1-209ENST00000611068 DSCR10P59022 87 aa10.19□□□□□ -0.78
RTN1-209ENST00000611068 LINC00208Q96KT6 92 aa10.19□□□□□ -0.78
RTN1-209ENST00000611068 Q75L30 129 aa10.19□□□□□ -0.78
RTN1-209ENST00000611068 DEFB105AQ8NG35 78 aa10.18□□□□□ -0.78
RTN1-209ENST00000611068 DEFB116Q30KQ4 102 aa10.18□□□□□ -0.78
RTN1-209ENST00000611068 GVQW2A0A096LPI5 108 aaPredicted RBP10.17□□□□□ -0.78
RTN1-209ENST00000611068 MOBPQ13875 183 aa10.17□□□□□ -0.78
RTN1-209ENST00000611068 LINC00528Q8N1L1 170 aa10.17□□□□□ -0.78
RTN1-209ENST00000611068 NDUFB1O75438 58 aa10.16□□□□□ -0.78
RTN1-209ENST00000611068 DYNC2H1Q8NCM8 4307 aaKnown RBP10.15□□□□□ -0.78
RTN1-209ENST00000611068 A0A1W2PNM2 257 aa10.15□□□□□ -0.78
RTN1-209ENST00000611068 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
RTN1-209ENST00000611068 KMT2AQ03164 3969 aa10.12□□□□□ -0.79
RTN1-209ENST00000611068 FAM168BA1KXE4 195 aa10.11□□□□□ -0.79
RTN1-209ENST00000611068 Q8N377 158 aa10.11□□□□□ -0.79
RTN1-209ENST00000611068 NBDYA0A0U1RRE5 68 aa10.11□□□□□ -0.79
RTN1-209ENST00000611068 LOC101927531A0A1B0GV80 90 aa10.11□□□□□ -0.79
RTN1-209ENST00000611068 KRTAP21-3Q3LHN1 58 aa10.09□□□□□ -0.79
RTN1-209ENST00000611068 IGLV5-48A0A075B6I7 105 aa10.09□□□□□ -0.79
RTN1-209ENST00000611068 PRAC1Q96KF2 57 aa10.09□□□□□ -0.79
RTN1-209ENST00000611068 VPREB1P12018 145 aa10.08□□□□□ -0.8
RTN1-209ENST00000611068 Q9BRP9 147 aa10.08□□□□□ -0.8
RTN1-209ENST00000611068 SERTAD4-AS1Q5TG53 156 aa10.08□□□□□ -0.8
RTN1-209ENST00000611068 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
RTN1-209ENST00000611068 KCNQ1DNQ9H478 68 aa10.08□□□□□ -0.8
RTN1-209ENST00000611068 MP68P56378 58 aa10.07□□□□□ -0.8
RTN1-209ENST00000611068 IGKV2-24A0A0C4DH68 120 aa10.06□□□□□ -0.8
RTN1-209ENST00000611068 LY6G6CO95867 125 aa10.06□□□□□ -0.8
RTN1-209ENST00000611068 RPL37AP8A6NKH3 93 aa10.04□□□□□ -0.8
RTN1-209ENST00000611068 NKAPP1Q8N9T2 125 aa10.04□□□□□ -0.8
RTN1-209ENST00000611068 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
RTN1-209ENST00000611068 C1orf137Q5JT78 98 aa10.03□□□□□ -0.8
RTN1-209ENST00000611068 COA5Q86WW8 74 aa10.03□□□□□ -0.8
RTN1-209ENST00000611068 VPS13DQ5THJ4 4388 aa10.02□□□□□ -0.8
RTN1-209ENST00000611068 SPINK7P58062 85 aa10.02□□□□□ -0.81
RTN1-209ENST00000611068 LINC00313P59037 77 aa10.02□□□□□ -0.81
RTN1-209ENST00000611068 Q8NBF4 154 aa10.02□□□□□ -0.81
RTN1-209ENST00000611068 CHTF8P0CG12 524 aa10□□□□□ -0.81
RTN1-209ENST00000611068 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
RTN1-209ENST00000611068 H0Y9P7 68 aa9.99□□□□□ -0.81
RTN1-209ENST00000611068 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
RTN1-209ENST00000611068 A0A096LNI7 61 aa9.99□□□□□ -0.81
RTN1-209ENST00000611068 SPAG11AQ6PDA7 123 aa9.99□□□□□ -0.81
RTN1-209ENST00000611068 Q6ZRN7 208 aaPredicted RBP9.99□□□□□ -0.81
RTN1-209ENST00000611068 A0A0G2JQZ4 141 aa9.98□□□□□ -0.81
RTN1-209ENST00000611068 A0A1W2PNN7 141 aa9.98□□□□□ -0.81
RTN1-209ENST00000611068 C7orf33Q8WU49 177 aa9.98□□□□□ -0.81
RTN1-209ENST00000611068 TNP2Q05952 138 aa9.97□□□□□ -0.81
RTN1-209ENST00000611068 SPRR4Q96PI1 79 aa9.97□□□□□ -0.81
RTN1-209ENST00000611068 A0A1B0GW54 56 aa9.96□□□□□ -0.81
RTN1-209ENST00000611068 DNAH2Q9P225 4427 aa9.96□□□□□ -0.81
RTN1-209ENST00000611068 C9orf163Q8N9P6 203 aa9.95□□□□□ -0.82
RTN1-209ENST00000611068 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
RTN1-209ENST00000611068 TLX1NBP0CAT3 122 aa9.95□□□□□ -0.82
RTN1-209ENST00000611068 RPL37AP61513 92 aaKnown RBP9.92□□□□□ -0.82
RTN1-209ENST00000611068 PLAC8Q9NZF1 115 aa9.92□□□□□ -0.82
RTN1-209ENST00000611068 LINC01554Q52M75 96 aa9.92□□□□□ -0.82
RTN1-209ENST00000611068 PRR26Q8N8Z3 221 aa9.92□□□□□ -0.82
RTN1-209ENST00000611068 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
RTN1-209ENST00000611068 PANO1I0J062 215 aa9.91□□□□□ -0.82
RTN1-209ENST00000611068 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
RTN1-209ENST00000611068 Q6ZR54 194 aa9.9□□□□□ -0.82
RTN1-209ENST00000611068 KRTAP29-1A8MX34 341 aaPredicted RBP9.89□□□□□ -0.83
RTN1-209ENST00000611068 A0A087WTM6 91 aa9.89□□□□□ -0.83
RTN1-209ENST00000611068 C14orf177Q52M58 125 aa9.89□□□□□ -0.83
RTN1-209ENST00000611068 SRRM2Q9UQ35 2752 aaKnown RBP9.88□□□□□ -0.83
RTN1-209ENST00000611068 HYDINQ4G0P3 5121 aa9.88□□□□□ -0.83
RTN1-209ENST00000611068 LINC00476Q8WZB0 136 aa9.88□□□□□ -0.83
RTN1-209ENST00000611068 C1orf134Q5TEV5 83 aa9.87□□□□□ -0.83
RTN1-209ENST00000611068 IGLV1-50A0A075B6I6 118 aa9.86□□□□□ -0.83
RTN1-209ENST00000611068 IGLV7-46A0A075B6I9 117 aa9.86□□□□□ -0.83
RTN1-209ENST00000611068 CASC2Q6XLA1 102 aa9.86□□□□□ -0.83
RTN1-209ENST00000611068 H3BPC8 53 aa9.85□□□□□ -0.83
RTN1-209ENST00000611068 PCOTHQ58A44 107 aa9.84□□□□□ -0.83
RTN1-209ENST00000611068 KRTAP11-1Q8IUC1 163 aa9.84□□□□□ -0.83
RTN1-209ENST00000611068 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.83□□□□□ -0.84
RTN1-209ENST00000611068 Q6ZRX8 168 aa9.83□□□□□ -0.84
RTN1-209ENST00000611068 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
RTN1-209ENST00000611068 RTL8CO15255 209 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms