RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 MEGF8Q7Z7M0 2845 aa6.51□□□□□ -1.37
PABPC1-224ENST00000610907 UBE2AP49459 152 aa6.51□□□□□ -1.37
PABPC1-224ENST00000610907 OCR1Q9BZK8 76 aa6.51□□□□□ -1.37
PABPC1-224ENST00000610907 H7BZZ5 65 aa6.49□□□□□ -1.37
PABPC1-224ENST00000610907 DSCR10P59022 87 aa6.48□□□□□ -1.37
PABPC1-224ENST00000610907 KRTAP11-1Q8IUC1 163 aa6.48□□□□□ -1.37
PABPC1-224ENST00000610907 FAM236DA0A1B0GTK5 79 aa6.48□□□□□ -1.37
PABPC1-224ENST00000610907 FAM236CP0DP71 79 aa6.48□□□□□ -1.37
PABPC1-224ENST00000610907 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
PABPC1-224ENST00000610907 A0A087WTM6 91 aa6.47□□□□□ -1.37
PABPC1-224ENST00000610907 KRTAP13-1Q8IUC0 172 aa6.47□□□□□ -1.37
PABPC1-224ENST00000610907 SPACA4Q8TDM5 124 aa6.47□□□□□ -1.37
PABPC1-224ENST00000610907 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
PABPC1-224ENST00000610907 ATP5EP56381 51 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-224ENST00000610907 SNURFQ9Y675 71 aa6.45□□□□□ -1.38
PABPC1-224ENST00000610907 A0A087WSZ3 146 aa6.44□□□□□ -1.38
PABPC1-224ENST00000610907 Q6ZR54 194 aa6.44□□□□□ -1.38
PABPC1-224ENST00000610907 PLECQ15149 4684 aaKnown RBP6.44□□□□□ -1.38
PABPC1-224ENST00000610907 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
PABPC1-224ENST00000610907 LCE6AA0A183 80 aa6.44□□□□□ -1.38
PABPC1-224ENST00000610907 PANO1I0J062 215 aa6.44□□□□□ -1.38
PABPC1-224ENST00000610907 K7EQZ3 153 aa6.44□□□□□ -1.38
PABPC1-224ENST00000610907 HCG22E2RYF7 251 aa6.43□□□□□ -1.38
PABPC1-224ENST00000610907 RPL37AP61513 92 aaKnown RBP6.43□□□□□ -1.38
PABPC1-224ENST00000610907 LYSTQ99698 3801 aa6.43□□□□□ -1.38
PABPC1-224ENST00000610907 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
PABPC1-224ENST00000610907 CSMD3Q7Z407 3707 aa6.42□□□□□ -1.38
PABPC1-224ENST00000610907 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-224ENST00000610907 A0A0G2JQZ4 141 aa6.41□□□□□ -1.38
PABPC1-224ENST00000610907 RTL8CO15255 209 aa6.4□□□□□ -1.38
PABPC1-224ENST00000610907 ZNF706Q9Y5V0 76 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-224ENST00000610907 VPS13DQ5THJ4 4388 aa6.4□□□□□ -1.38
PABPC1-224ENST00000610907 TENM2Q9NT68 2774 aa6.4□□□□□ -1.39
PABPC1-224ENST00000610907 LINC00483Q53H64 154 aa6.4□□□□□ -1.39
PABPC1-224ENST00000610907 C5orf47Q569G3 176 aa6.4□□□□□ -1.39
PABPC1-224ENST00000610907 PLAC8Q9NZF1 115 aa6.4□□□□□ -1.39
PABPC1-224ENST00000610907 FAM30AQ9NZY2 134 aa6.4□□□□□ -1.39
PABPC1-224ENST00000610907 LINC00472Q9H8W2 130 aa6.39□□□□□ -1.39
PABPC1-224ENST00000610907 DNAH7Q8WXX0 4024 aa6.39□□□□□ -1.39
PABPC1-224ENST00000610907 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
PABPC1-224ENST00000610907 OXTP01178 125 aa6.37□□□□□ -1.39
PABPC1-224ENST00000610907 C1orf134Q5TEV5 83 aa6.37□□□□□ -1.39
PABPC1-224ENST00000610907 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
PABPC1-224ENST00000610907 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
PABPC1-224ENST00000610907 PRKDCP78527 4128 aaKnown RBP6.36□□□□□ -1.39
PABPC1-224ENST00000610907 A8MWP4 228 aa6.36□□□□□ -1.39
PABPC1-224ENST00000610907 DEFB116Q30KQ4 102 aa6.35□□□□□ -1.39
PABPC1-224ENST00000610907 KRTAP29-1A8MX34 341 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-224ENST00000610907 ZNF861PO60384 105 aa6.35□□□□□ -1.39
PABPC1-224ENST00000610907 ZCCHC13Q8WW36 166 aaKnown RBP6.35□□□□□ -1.39
PABPC1-224ENST00000610907 PSORS1C2Q9UIG4 136 aa6.35□□□□□ -1.39
PABPC1-224ENST00000610907 TGP01266 2768 aa6.35□□□□□ -1.39
PABPC1-224ENST00000610907 STARD9Q9P2P6 4700 aa6.34□□□□□ -1.39
PABPC1-224ENST00000610907 NDUFB1O75438 58 aa6.32□□□□□ -1.4
PABPC1-224ENST00000610907 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
PABPC1-224ENST00000610907 SMIM26A0A096LP01 95 aa6.31□□□□□ -1.4
PABPC1-224ENST00000610907 H3BPC8 53 aa6.31□□□□□ -1.4
PABPC1-224ENST00000610907 WFDC13Q8IUB5 93 aa6.31□□□□□ -1.4
PABPC1-224ENST00000610907 IGLV9-49A0A0B4J1Y8 123 aa6.31□□□□□ -1.4
PABPC1-224ENST00000610907 MP68P56378 58 aa6.31□□□□□ -1.4
PABPC1-224ENST00000610907 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
PABPC1-224ENST00000610907 Q5XG85 94 aa6.29□□□□□ -1.4
PABPC1-224ENST00000610907 LCE2BO14633 110 aa6.28□□□□□ -1.4
PABPC1-224ENST00000610907 LY6G6CO95867 125 aa6.28□□□□□ -1.4
PABPC1-224ENST00000610907 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
PABPC1-224ENST00000610907 SRRM2Q9UQ35 2752 aaKnown RBP6.27□□□□□ -1.4
PABPC1-224ENST00000610907 IGLV7-43P04211 117 aa6.27□□□□□ -1.41
PABPC1-224ENST00000610907 Q96NJ1 140 aa6.27□□□□□ -1.41
PABPC1-224ENST00000610907 MMP24-AS1A0A0U1RRL7 71 aa6.26□□□□□ -1.41
PABPC1-224ENST00000610907 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
PABPC1-224ENST00000610907 MOBPQ13875 183 aa6.26□□□□□ -1.41
PABPC1-224ENST00000610907 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
PABPC1-224ENST00000610907 HECTD4Q9Y4D8 3996 aa6.25□□□□□ -1.41
PABPC1-224ENST00000610907 CYP4F30PQ9H0H9 118 aa6.24□□□□□ -1.41
PABPC1-224ENST00000610907 TP53AIP1Q9HCN2 124 aa6.24□□□□□ -1.41
PABPC1-224ENST00000610907 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
PABPC1-224ENST00000610907 H0Y9P7 68 aa6.23□□□□□ -1.41
PABPC1-224ENST00000610907 CD164Q04900 197 aa6.23□□□□□ -1.41
PABPC1-224ENST00000610907 DNAH2Q9P225 4427 aa6.23□□□□□ -1.41
PABPC1-224ENST00000610907 CDK2AP2O75956 126 aa6.23□□□□□ -1.41
PABPC1-224ENST00000610907 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
PABPC1-224ENST00000610907 SSBP3-AS1Q7Z2R9 100 aa6.23□□□□□ -1.41
PABPC1-224ENST00000610907 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
PABPC1-224ENST00000610907 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
PABPC1-224ENST00000610907 FP248Q71RG6 208 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-224ENST00000610907 C8orf17Q9NRJ1 99 aa6.22□□□□□ -1.41
PABPC1-224ENST00000610907 DNAH6Q9C0G6 4158 aa6.21□□□□□ -1.42
PABPC1-224ENST00000610907 HRCT1Q6UXD1 115 aa6.21□□□□□ -1.42
PABPC1-224ENST00000610907 SPANXA2-OT1Q8N9U9 137 aa6.21□□□□□ -1.42
PABPC1-224ENST00000610907 KMT2AQ03164 3969 aa6.21□□□□□ -1.42
PABPC1-224ENST00000610907 CIRBP-AS1Q8TBR5 109 aa6.2□□□□□ -1.42
PABPC1-224ENST00000610907 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
PABPC1-224ENST00000610907 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
PABPC1-224ENST00000610907 Q6ZSA8 131 aa6.18□□□□□ -1.42
PABPC1-224ENST00000610907 C1orf64Q8NEQ6 169 aa6.18□□□□□ -1.42
PABPC1-224ENST00000610907 DNAH8Q96JB1 4490 aa6.17□□□□□ -1.42
PABPC1-224ENST00000610907 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
PABPC1-224ENST00000610907 MRPL34Q9BQ48 92 aaKnown RBP6.16□□□□□ -1.42
PABPC1-224ENST00000610907 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.42
PABPC1-224ENST00000610907 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms