RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 UBE2AP49459 152 aa8.48□□□□□ -1.05
NEK3-205ENST00000610828 SRRM2Q9UQ35 2752 aaKnown RBP8.47□□□□□ -1.05
NEK3-205ENST00000610828 Q8N9L7 120 aa8.47□□□□□ -1.05
NEK3-205ENST00000610828 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
NEK3-205ENST00000610828 TGP01266 2768 aa8.47□□□□□ -1.05
NEK3-205ENST00000610828 H0Y9J4 135 aa8.47□□□□□ -1.05
NEK3-205ENST00000610828 BPY2O14599 106 aa8.47□□□□□ -1.05
NEK3-205ENST00000610828 A0A0G2JQZ4 141 aa8.46□□□□□ -1.06
NEK3-205ENST00000610828 SPRR4Q96PI1 79 aa8.46□□□□□ -1.06
NEK3-205ENST00000610828 RTL8CO15255 209 aa8.46□□□□□ -1.06
NEK3-205ENST00000610828 FBN3Q75N90 2809 aa8.45□□□□□ -1.06
NEK3-205ENST00000610828 IGFL1Q6UW32 110 aa8.44□□□□□ -1.06
NEK3-205ENST00000610828 LY6G6CO95867 125 aa8.44□□□□□ -1.06
NEK3-205ENST00000610828 BCE1O60756 84 aa8.43□□□□□ -1.06
NEK3-205ENST00000610828 C1orf134Q5TEV5 83 aa8.43□□□□□ -1.06
NEK3-205ENST00000610828 IGKV4-1P06312 121 aa8.42□□□□□ -1.06
NEK3-205ENST00000610828 DNAH17Q9UFH2 4485 aa8.42□□□□□ -1.06
NEK3-205ENST00000610828 IGLV8-61A0A075B6I0 122 aa8.41□□□□□ -1.06
NEK3-205ENST00000610828 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
NEK3-205ENST00000610828 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
NEK3-205ENST00000610828 SPRR1BP22528 89 aa8.39□□□□□ -1.07
NEK3-205ENST00000610828 KRTAP13-1Q8IUC0 172 aa8.39□□□□□ -1.07
NEK3-205ENST00000610828 TRAV7A0A075B6U4 112 aa8.39□□□□□ -1.07
NEK3-205ENST00000610828 FRAS1Q86XX4 4008 aa8.38□□□□□ -1.07
NEK3-205ENST00000610828 TMEM258P61165 79 aa8.37□□□□□ -1.07
NEK3-205ENST00000610828 A0A087WSZ3 146 aa8.36□□□□□ -1.07
NEK3-205ENST00000610828 J3KT08 172 aa8.36□□□□□ -1.07
NEK3-205ENST00000610828 DNAH8Q96JB1 4490 aa8.36□□□□□ -1.07
NEK3-205ENST00000610828 V9GYY9 64 aa8.35□□□□□ -1.07
NEK3-205ENST00000610828 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.07
NEK3-205ENST00000610828 DSCR10P59022 87 aa8.34□□□□□ -1.07
NEK3-205ENST00000610828 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
NEK3-205ENST00000610828 WWC2-AS2Q96NR7 200 aa8.33□□□□□ -1.08
NEK3-205ENST00000610828 DNAH6Q9C0G6 4158 aa8.33□□□□□ -1.08
NEK3-205ENST00000610828 DEFB116Q30KQ4 102 aa8.33□□□□□ -1.08
NEK3-205ENST00000610828 K7EQZ3 153 aa8.32□□□□□ -1.08
NEK3-205ENST00000610828 SNURFQ9Y675 71 aa8.32□□□□□ -1.08
NEK3-205ENST00000610828 KRTAP21-3Q3LHN1 58 aa8.3□□□□□ -1.08
NEK3-205ENST00000610828 RPS28P62857 69 aaKnown RBP8.29□□□□□ -1.08
NEK3-205ENST00000610828 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
NEK3-205ENST00000610828 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
NEK3-205ENST00000610828 HYDINQ4G0P3 5121 aa8.28□□□□□ -1.08
NEK3-205ENST00000610828 KLKP1Q107X0 134 aa8.28□□□□□ -1.08
NEK3-205ENST00000610828 DNAH5Q8TE73 4624 aa8.28□□□□□ -1.08
NEK3-205ENST00000610828 H7BZZ5 65 aa8.27□□□□□ -1.09
NEK3-205ENST00000610828 OCR1Q9BZK8 76 aa8.27□□□□□ -1.09
NEK3-205ENST00000610828 ZNF861PO60384 105 aa8.26□□□□□ -1.09
NEK3-205ENST00000610828 KRTAP10-2P60368 255 aa8.26□□□□□ -1.09
NEK3-205ENST00000610828 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
NEK3-205ENST00000610828 ALMS1Q8TCU4 4167 aa8.26□□□□□ -1.09
NEK3-205ENST00000610828 DNAH11Q96DT5 4516 aa8.26□□□□□ -1.09
NEK3-205ENST00000610828 C4orf26Q17RF5 130 aa8.25□□□□□ -1.09
NEK3-205ENST00000610828 LINC00483Q53H64 154 aa8.25□□□□□ -1.09
NEK3-205ENST00000610828 HRCT1Q6UXD1 115 aa8.25□□□□□ -1.09
NEK3-205ENST00000610828 FAM236DA0A1B0GTK5 79 aa8.24□□□□□ -1.09
NEK3-205ENST00000610828 FAM236CP0DP71 79 aa8.24□□□□□ -1.09
NEK3-205ENST00000610828 RPL37AP61513 92 aaKnown RBP8.24□□□□□ -1.09
NEK3-205ENST00000610828 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
NEK3-205ENST00000610828 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
NEK3-205ENST00000610828 OXTP01178 125 aa8.22□□□□□ -1.09
NEK3-205ENST00000610828 TMEM254Q8TBM7 123 aa8.22□□□□□ -1.09
NEK3-205ENST00000610828 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
NEK3-205ENST00000610828 FAT2Q9NYQ8 4349 aa8.21□□□□□ -1.1
NEK3-205ENST00000610828 LINC00472Q9H8W2 130 aa8.21□□□□□ -1.1
NEK3-205ENST00000610828 CIRBP-AS1Q8TBR5 109 aa8.2□□□□□ -1.1
NEK3-205ENST00000610828 IGLV7-43P04211 117 aa8.2□□□□□ -1.1
NEK3-205ENST00000610828 MOBPQ13875 183 aa8.2□□□□□ -1.1
NEK3-205ENST00000610828 PKD1P98161 4303 aa8.19□□□□□ -1.1
NEK3-205ENST00000610828 WFDC13Q8IUB5 93 aa8.19□□□□□ -1.1
NEK3-205ENST00000610828 Q5XG85 94 aa8.18□□□□□ -1.1
NEK3-205ENST00000610828 A8MWP4 228 aa8.17□□□□□ -1.1
NEK3-205ENST00000610828 NDUFC1O43677 76 aa8.17□□□□□ -1.1
NEK3-205ENST00000610828 LINC00336Q6ZUF6 198 aa8.17□□□□□ -1.1
NEK3-205ENST00000610828 PRR15Q8IV56 129 aa8.17□□□□□ -1.1
NEK3-205ENST00000610828 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
NEK3-205ENST00000610828 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
NEK3-205ENST00000610828 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
NEK3-205ENST00000610828 KRTAP10-1P60331 282 aa8.14□□□□□ -1.11
NEK3-205ENST00000610828 C1orf195Q5TG92 126 aa8.14□□□□□ -1.11
NEK3-205ENST00000610828 Q6ZSA8 131 aa8.12□□□□□ -1.11
NEK3-205ENST00000610828 Q96NJ1 140 aa8.12□□□□□ -1.11
NEK3-205ENST00000610828 CASC2Q6XLA1 102 aa8.12□□□□□ -1.11
NEK3-205ENST00000610828 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
NEK3-205ENST00000610828 KRTAP29-1A8MX34 341 aaPredicted RBP8.11□□□□□ -1.11
NEK3-205ENST00000610828 LRP1BQ9NZR2 4599 aa8.11□□□□□ -1.11
NEK3-205ENST00000610828 LCE6AA0A183 80 aa8.11□□□□□ -1.11
NEK3-205ENST00000610828 NDUFB1O75438 58 aa8.1□□□□□ -1.11
NEK3-205ENST00000610828 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
NEK3-205ENST00000610828 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
NEK3-205ENST00000610828 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
NEK3-205ENST00000610828 VPS13BQ7Z7G8 4022 aa8.05□□□□□ -1.12
NEK3-205ENST00000610828 PKHD1P08F94 4074 aa8.04□□□□□ -1.12
NEK3-205ENST00000610828 hDV103S1A0JD37 113 aa8.04□□□□□ -1.12
NEK3-205ENST00000610828 CDK2AP2O75956 126 aa8.03□□□□□ -1.12
NEK3-205ENST00000610828 IGHV6-1A0A0B4J1U7 121 aa8.02□□□□□ -1.13
NEK3-205ENST00000610828 MP68P56378 58 aa8.02□□□□□ -1.13
NEK3-205ENST00000610828 ZCCHC13Q8WW36 166 aaKnown RBP8.02□□□□□ -1.13
NEK3-205ENST00000610828 SSBP3-AS1Q7Z2R9 100 aa8.02□□□□□ -1.13
NEK3-205ENST00000610828 A0A087X002 238 aa8□□□□□ -1.13
NEK3-205ENST00000610828 A0A1B0GVX0 72 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 257.9 ms