RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 LINC01547P58512 204 aaPredicted RBP10.87□□□□□ -0.67
PPFIA3-207ENST00000602716 LINC00528Q8N1L1 170 aa10.87□□□□□ -0.67
PPFIA3-207ENST00000602716 HAMPP81172 84 aa10.87□□□□□ -0.67
PPFIA3-207ENST00000602716 IGLV1-50A0A075B6I6 118 aa10.86□□□□□ -0.67
PPFIA3-207ENST00000602716 DPH3Q96FX2 82 aa10.85□□□□□ -0.67
PPFIA3-207ENST00000602716 DYNC1H1Q14204 4646 aaKnown RBP10.85□□□□□ -0.67
PPFIA3-207ENST00000602716 LRP1BQ9NZR2 4599 aa10.85□□□□□ -0.67
PPFIA3-207ENST00000602716 EPM2AB3EWF7 344 aa10.84□□□□□ -0.67
PPFIA3-207ENST00000602716 KCNQ1DNQ9H478 68 aa10.84□□□□□ -0.67
PPFIA3-207ENST00000602716 CXCL6P80162 114 aa10.82□□□□□ -0.68
PPFIA3-207ENST00000602716 Q6ZSA8 131 aa10.82□□□□□ -0.68
PPFIA3-207ENST00000602716 PLAC8Q9NZF1 115 aa10.82□□□□□ -0.68
PPFIA3-207ENST00000602716 TMEM258P61165 79 aa10.8□□□□□ -0.68
PPFIA3-207ENST00000602716 BCE1O60756 84 aa10.79□□□□□ -0.68
PPFIA3-207ENST00000602716 PRYO14603 147 aa10.79□□□□□ -0.68
PPFIA3-207ENST00000602716 UBE2BP63146 152 aa10.79□□□□□ -0.68
PPFIA3-207ENST00000602716 SCXQ7RTU7 201 aa10.79□□□□□ -0.68
PPFIA3-207ENST00000602716 CIRBP-AS1Q8TBR5 109 aa10.79□□□□□ -0.68
PPFIA3-207ENST00000602716 KRTAP4-16G5E9R7 235 aaPredicted RBP10.78□□□□□ -0.68
PPFIA3-207ENST00000602716 SPRR1AP35321 89 aa10.78□□□□□ -0.68
PPFIA3-207ENST00000602716 REG3GQ6UW15 175 aa10.75□□□□□ -0.69
PPFIA3-207ENST00000602716 TRAV7A0A075B6U4 112 aa10.74□□□□□ -0.69
PPFIA3-207ENST00000602716 ETDCA0A1B0GVM5 59 aa10.72□□□□□ -0.69
PPFIA3-207ENST00000602716 APOBP04114 4563 aaKnown RBP10.71□□□□□ -0.69
PPFIA3-207ENST00000602716 PRLHP81277 87 aa10.71□□□□□ -0.69
PPFIA3-207ENST00000602716 Q6ZRX8 168 aa10.71□□□□□ -0.69
PPFIA3-207ENST00000602716 C20orf197Q8N268 126 aa10.71□□□□□ -0.69
PPFIA3-207ENST00000602716 Q9BRP9 147 aa10.71□□□□□ -0.69
PPFIA3-207ENST00000602716 Q8N377 158 aa10.7□□□□□ -0.7
PPFIA3-207ENST00000602716 PSORS1C2Q9UIG4 136 aa10.68□□□□□ -0.7
PPFIA3-207ENST00000602716 DHRS4-AS1Q9P1J3 65 aa10.68□□□□□ -0.7
PPFIA3-207ENST00000602716 DEFB105AQ8NG35 78 aa10.67□□□□□ -0.7
PPFIA3-207ENST00000602716 IGLV5-48A0A075B6I7 105 aa10.67□□□□□ -0.7
PPFIA3-207ENST00000602716 ERC2-IT1O76042 136 aa10.67□□□□□ -0.7
PPFIA3-207ENST00000602716 NREPQ16612 68 aa10.63□□□□□ -0.71
PPFIA3-207ENST00000602716 KRTAP13-1Q8IUC0 172 aa10.63□□□□□ -0.71
PPFIA3-207ENST00000602716 KLKP1Q107X0 134 aa10.63□□□□□ -0.71
PPFIA3-207ENST00000602716 EPPK1P58107 5090 aaKnown RBP10.63□□□□□ -0.71
PPFIA3-207ENST00000602716 OXTP01178 125 aa10.62□□□□□ -0.71
PPFIA3-207ENST00000602716 IGKV4-1P06312 121 aa10.62□□□□□ -0.71
PPFIA3-207ENST00000602716 C1orf137Q5JT78 98 aa10.62□□□□□ -0.71
PPFIA3-207ENST00000602716 ST20-AS1Q8NBB2 130 aa10.62□□□□□ -0.71
PPFIA3-207ENST00000602716 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
PPFIA3-207ENST00000602716 H7BZZ5 65 aa10.61□□□□□ -0.71
PPFIA3-207ENST00000602716 UBE2AP49459 152 aa10.61□□□□□ -0.71
PPFIA3-207ENST00000602716 Q8N9L7 120 aa10.6□□□□□ -0.71
PPFIA3-207ENST00000602716 Q5XG85 94 aa10.59□□□□□ -0.71
PPFIA3-207ENST00000602716 BPY2O14599 106 aa10.58□□□□□ -0.72
PPFIA3-207ENST00000602716 FAM236DA0A1B0GTK5 79 aa10.58□□□□□ -0.72
PPFIA3-207ENST00000602716 A0A1B0GW54 56 aa10.58□□□□□ -0.72
PPFIA3-207ENST00000602716 FAM236CP0DP71 79 aa10.58□□□□□ -0.72
PPFIA3-207ENST00000602716 A0A1W2PNM2 257 aa10.57□□□□□ -0.72
PPFIA3-207ENST00000602716 SNURFQ9Y675 71 aa10.57□□□□□ -0.72
PPFIA3-207ENST00000602716 H0Y9J4 135 aa10.56□□□□□ -0.72
PPFIA3-207ENST00000602716 SMR3BP02814 79 aaPredicted RBP10.56□□□□□ -0.72
PPFIA3-207ENST00000602716 FAT1Q14517 4588 aa10.55□□□□□ -0.72
PPFIA3-207ENST00000602716 SRRM2Q9UQ35 2752 aaKnown RBP10.55□□□□□ -0.72
PPFIA3-207ENST00000602716 VPS13BQ7Z7G8 4022 aa10.54□□□□□ -0.72
PPFIA3-207ENST00000602716 IGLV7-43P04211 117 aa10.53□□□□□ -0.72
PPFIA3-207ENST00000602716 C4orf26Q17RF5 130 aa10.53□□□□□ -0.72
PPFIA3-207ENST00000602716 Q8NBF4 154 aa10.53□□□□□ -0.72
PPFIA3-207ENST00000602716 ZNF861PO60384 105 aa10.51□□□□□ -0.73
PPFIA3-207ENST00000602716 SPRR4Q96PI1 79 aa10.51□□□□□ -0.73
PPFIA3-207ENST00000602716 OCR1Q9BZK8 76 aa10.51□□□□□ -0.73
PPFIA3-207ENST00000602716 HSPG2P98160 4391 aa10.5□□□□□ -0.73
PPFIA3-207ENST00000602716 F8WEM9 126 aa10.5□□□□□ -0.73
PPFIA3-207ENST00000602716 NDUFC1O43677 76 aa10.5□□□□□ -0.73
PPFIA3-207ENST00000602716 HRCT1Q6UXD1 115 aa10.48□□□□□ -0.73
PPFIA3-207ENST00000602716 TMEM254Q8TBM7 123 aa10.48□□□□□ -0.73
PPFIA3-207ENST00000602716 RYR1P21817 5038 aa10.48□□□□□ -0.73
PPFIA3-207ENST00000602716 SMIM29Q86T20 159 aa10.48□□□□□ -0.73
PPFIA3-207ENST00000602716 SERP1Q9Y6X1 66 aa10.48□□□□□ -0.73
PPFIA3-207ENST00000602716 KIAA1109Q2LD37 5005 aa10.46□□□□□ -0.73
PPFIA3-207ENST00000602716 RPL37AP61513 92 aaKnown RBP10.45□□□□□ -0.74
PPFIA3-207ENST00000602716 PRO0628Q9UI54 55 aa10.45□□□□□ -0.74
PPFIA3-207ENST00000602716 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
PPFIA3-207ENST00000602716 KRTAP17-1Q9BYP8 105 aa10.43□□□□□ -0.74
PPFIA3-207ENST00000602716 A0A0U1RQV1 116 aa10.43□□□□□ -0.74
PPFIA3-207ENST00000602716 ANAPC11Q9NYG5 84 aa10.43□□□□□ -0.74
PPFIA3-207ENST00000602716 DSCR10P59022 87 aa10.41□□□□□ -0.74
PPFIA3-207ENST00000602716 CDK2AP2O75956 126 aa10.4□□□□□ -0.74
PPFIA3-207ENST00000602716 ATP5EP56381 51 aaPredicted RBP10.4□□□□□ -0.74
PPFIA3-207ENST00000602716 SPRR1BP22528 89 aa10.4□□□□□ -0.75
PPFIA3-207ENST00000602716 IGFL1Q6UW32 110 aa10.38□□□□□ -0.75
PPFIA3-207ENST00000602716 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
PPFIA3-207ENST00000602716 A0A0G2JQZ4 141 aa10.36□□□□□ -0.75
PPFIA3-207ENST00000602716 K7EQZ3 153 aa10.36□□□□□ -0.75
PPFIA3-207ENST00000602716 LINC00483Q53H64 154 aa10.36□□□□□ -0.75
PPFIA3-207ENST00000602716 ZNF706Q9Y5V0 76 aaPredicted RBP10.34□□□□□ -0.75
PPFIA3-207ENST00000602716 SMIM26A0A096LP01 95 aa10.33□□□□□ -0.76
PPFIA3-207ENST00000602716 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
PPFIA3-207ENST00000602716 IGLV9-49A0A0B4J1Y8 123 aa10.31□□□□□ -0.76
PPFIA3-207ENST00000602716 Q5VSD8 79 aa10.31□□□□□ -0.76
PPFIA3-207ENST00000602716 HCG22E2RYF7 251 aa10.29□□□□□ -0.76
PPFIA3-207ENST00000602716 A0A087WSZ3 146 aa10.28□□□□□ -0.76
PPFIA3-207ENST00000602716 A0A087X002 238 aa10.28□□□□□ -0.76
PPFIA3-207ENST00000602716 SPINK6Q6UWN8 80 aa10.28□□□□□ -0.76
PPFIA3-207ENST00000602716 FP248Q71RG6 208 aaPredicted RBP10.27□□□□□ -0.77
PPFIA3-207ENST00000602716 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.77
PPFIA3-207ENST00000602716 MOBPQ13875 183 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms