RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 AMELXQ99217 191 aa2.02□□□□□ -2.09
VRK3-222ENST00000601324 CST9LQ9H4G1 147 aa2.02□□□□□ -2.09
VRK3-222ENST00000601324 UMAD1C9J7I0 102 aa2.01□□□□□ -2.09
VRK3-222ENST00000601324 TRGC2P03986 189 aa2.01□□□□□ -2.09
VRK3-222ENST00000601324 PDZD11Q5EBL8 140 aa2.01□□□□□ -2.09
VRK3-222ENST00000601324 ORMDL3Q8N138 153 aa2.01□□□□□ -2.09
VRK3-222ENST00000601324 TOMM7Q9P0U1 55 aa2.01□□□□□ -2.09
VRK3-222ENST00000601324 NAT8Q9UHE5 227 aa2.01□□□□□ -2.09
VRK3-222ENST00000601324 A8MWL6 223 aa2□□□□□ -2.09
VRK3-222ENST00000601324 C9JQL5 133 aa2□□□□□ -2.09
VRK3-222ENST00000601324 LGALS3P17931 250 aaKnown RBP2□□□□□ -2.09
VRK3-222ENST00000601324 GNG4P50150 75 aa2□□□□□ -2.09
VRK3-222ENST00000601324 VAMP3Q15836 100 aa2□□□□□ -2.09
VRK3-222ENST00000601324 BATFQ16520 125 aa2□□□□□ -2.09
VRK3-222ENST00000601324 Q5XG85 94 aa2□□□□□ -2.09
VRK3-222ENST00000601324 TMEM136Q6ZRR5 245 aa2□□□□□ -2.09
VRK3-222ENST00000601324 SIGMAR1Q99720 223 aa2□□□□□ -2.09
VRK3-222ENST00000601324 C20orf78Q9BR46 151 aa2□□□□□ -2.09
VRK3-222ENST00000601324 SMIM2Q9BVW6 85 aa2□□□□□ -2.09
VRK3-222ENST00000601324 EIF5A2Q9GZV4 153 aaKnown RBP2□□□□□ -2.09
VRK3-222ENST00000601324 UQCR10Q9UDW1 63 aa2□□□□□ -2.09
VRK3-222ENST00000601324 CDKN2A-AS1Q9UH64 79 aa2□□□□□ -2.09
VRK3-222ENST00000601324 LAMTOR2Q9Y2Q5 125 aa2□□□□□ -2.09
VRK3-222ENST00000601324 BORCS7-ASMTA0A0B4J1R7 106 aa1.99□□□□□ -2.09
VRK3-222ENST00000601324 PPP1R17O96001 155 aa1.99□□□□□ -2.09
VRK3-222ENST00000601324 MRPL51Q4U2R6 128 aaKnown RBP1.99□□□□□ -2.09
VRK3-222ENST00000601324 C1orf195Q5TG92 126 aa1.99□□□□□ -2.09
VRK3-222ENST00000601324 TMEM141Q96I45 108 aa1.99□□□□□ -2.09
VRK3-222ENST00000601324 VAMP8Q9BV40 100 aa1.99□□□□□ -2.09
VRK3-222ENST00000601324 SND1-IT1Q9HBX3 110 aa1.99□□□□□ -2.09
VRK3-222ENST00000601324 IGHV6-1A0A0B4J1U7 121 aa1.98□□□□□ -2.09
VRK3-222ENST00000601324 A0A1B0GUT8 65 aa1.98□□□□□ -2.09
VRK3-222ENST00000601324 A0A1B0GV50 99 aa1.98□□□□□ -2.09
VRK3-222ENST00000601324 IGIPA6NJ69 53 aa1.98□□□□□ -2.09
VRK3-222ENST00000601324 PDE6DO43924 150 aa1.98□□□□□ -2.09
VRK3-222ENST00000601324 FAM104BQ5XKR9 115 aa1.98□□□□□ -2.09
VRK3-222ENST00000601324 Q9BRP9 147 aa1.98□□□□□ -2.09
VRK3-222ENST00000601324 KCNQ1DNQ9H478 68 aa1.98□□□□□ -2.09
VRK3-222ENST00000601324 A0A1B0GW15 77 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 HIGD1CA8MV81 97 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 J3QR89 54 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 NPYP01303 97 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 SRP19P09132 144 aaKnown RBP1.97□□□□□ -2.09
VRK3-222ENST00000601324 IFI27P40305 119 aaPredicted RBP1.97□□□□□ -2.09
VRK3-222ENST00000601324 GTF2H5Q6ZYL4 71 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 FAM213BQ8TBF2 198 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 C20orf166-AS1Q96NR2 134 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 MANBALQ9NQG1 85 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 GNG13Q9P2W3 67 aa1.97□□□□□ -2.09
VRK3-222ENST00000601324 TAX1BP3O14907 124 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 P0C880 135 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 IGLC3P0DOY3 106 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 SPRR1BP22528 89 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 HERVK_113P63121 156 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 HSD52Q0P140 79 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 SPATA45Q537H7 98 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 COX7B2Q8TF08 81 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 LIMD2Q9BT23 127 aa1.96□□□□□ -2.1
VRK3-222ENST00000601324 MT1BP07438 61 aa1.95□□□□□ -2.1
VRK3-222ENST00000601324 HINT1P49773 126 aaPredicted RBP1.95□□□□□ -2.1
VRK3-222ENST00000601324 ADIRFQ15847 76 aa1.95□□□□□ -2.1
VRK3-222ENST00000601324 PMCHL1Q16048 86 aa1.95□□□□□ -2.1
VRK3-222ENST00000601324 MRPL54Q6P161 138 aaKnown RBP1.95□□□□□ -2.1
VRK3-222ENST00000601324 ERG28Q9UKR5 140 aa1.95□□□□□ -2.1
VRK3-222ENST00000601324 TRAPPC1Q9Y5R8 145 aa1.95□□□□□ -2.1
VRK3-222ENST00000601324 A6NN06 94 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 D6R8Y8 96 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 H3BRM9 83 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 HRES1P13985 223 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 SPRR2EP22531 72 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 SPRR2BP35325 72 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 SPRR2AP35326 72 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 CD164Q04900 197 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 HRCT1Q6UXD1 115 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 FA2HQ7L5A8 372 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 BOD1L2Q8IYS8 172 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 HSPB8Q9UJY1 196 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 V9GYV3 84 aa1.94□□□□□ -2.1
VRK3-222ENST00000601324 TRAV9-1A0A075B6T8 112 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 A0A0G2JQZ4 141 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 TINCRA0A1B0GVN0 87 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 K7EP34 96 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 CKS2P33552 79 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 SEC11AP67812 179 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 COX17Q14061 63 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 BVES-AS1Q5T3Y7 98 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 C9orf153Q5TBE3 101 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 Q6ZRX8 168 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 ADM2Q7Z4H4 148 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 BAGE3Q86Y29 109 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 SMIM20Q8N5G0 67 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 BORCS7Q96B45 105 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 PMCHL2Q9BQD1 86 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 OSTCQ9NRP0 149 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 SPANXCQ9NY87 97 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 SS18L2Q9UHA2 77 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 NAT8BQ9UHF3 227 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 CYSLTR1Q9Y271 337 aa1.93□□□□□ -2.1
VRK3-222ENST00000601324 TRBV10-3A0A0K0K1G6 114 aa1.92□□□□□ -2.1
VRK3-222ENST00000601324 ETDCA0A1B0GVM5 59 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms