RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 KRTAP29-1A8MX34 341 aaPredicted RBP12.2□□□□□ -0.46
IRF3-221ENST00000598808 OBSCN-AS1Q96MR7 158 aa12.2□□□□□ -0.46
IRF3-221ENST00000598808 FAM240AA0A1B0GVK7 77 aa12.19□□□□□ -0.46
IRF3-221ENST00000598808 ETDCA0A1B0GVM5 59 aa12.19□□□□□ -0.46
IRF3-221ENST00000598808 JMJD7-PLA2G4BH0Y9G9 81 aa12.19□□□□□ -0.46
IRF3-221ENST00000598808 DHRS4-AS1Q9P1J3 65 aa12.19□□□□□ -0.46
IRF3-221ENST00000598808 KRTAP4-16G5E9R7 235 aaPredicted RBP12.16□□□□□ -0.46
IRF3-221ENST00000598808 ACYP1P07311 99 aa12.15□□□□□ -0.46
IRF3-221ENST00000598808 Q6ZRX8 168 aa12.15□□□□□ -0.46
IRF3-221ENST00000598808 HIGD2AQ9BW72 106 aa12.15□□□□□ -0.46
IRF3-221ENST00000598808 Q6ZQY7 126 aa12.14□□□□□ -0.47
IRF3-221ENST00000598808 B5MCH6 92 aa12.13□□□□□ -0.47
IRF3-221ENST00000598808 KRTAP13-1Q8IUC0 172 aa12.13□□□□□ -0.47
IRF3-221ENST00000598808 C21orf62-AS1Q17RA5 79 aa12.11□□□□□ -0.47
IRF3-221ENST00000598808 PDE6GP18545 87 aa12.07□□□□□ -0.48
IRF3-221ENST00000598808 KRTAP1-4P0C5Y4 121 aa12.05□□□□□ -0.48
IRF3-221ENST00000598808 PRR26Q8N8Z3 221 aa12.05□□□□□ -0.48
IRF3-221ENST00000598808 CDIP1Q9H305 208 aa12.05□□□□□ -0.48
IRF3-221ENST00000598808 LAMTOR3Q9UHA4 124 aa12.05□□□□□ -0.48
IRF3-221ENST00000598808 RBM3P98179 157 aaKnown RBP12.04□□□□□ -0.48
IRF3-221ENST00000598808 MT1HL1P0DM35 61 aa12.03□□□□□ -0.48
IRF3-221ENST00000598808 C14orf132Q9NPU4 83 aa12.03□□□□□ -0.48
IRF3-221ENST00000598808 SMCR5Q8TEV8 140 aa12.02□□□□□ -0.48
IRF3-221ENST00000598808 SIGMAR1Q99720 223 aa12.02□□□□□ -0.48
IRF3-221ENST00000598808 Q9BRP9 147 aa12.02□□□□□ -0.48
IRF3-221ENST00000598808 ANAPC11Q9NYG5 84 aa12.02□□□□□ -0.48
IRF3-221ENST00000598808 LOC110117498A0A087WWA1 95 aa12.02□□□□□ -0.49
IRF3-221ENST00000598808 CCKP06307 115 aa12.01□□□□□ -0.49
IRF3-221ENST00000598808 ZNF706Q9Y5V0 76 aaPredicted RBP12.01□□□□□ -0.49
IRF3-221ENST00000598808 NDUFV3P56181 108 aaKnown RBP12□□□□□ -0.49
IRF3-221ENST00000598808 TNXBP22105 4242 aa11.99□□□□□ -0.49
IRF3-221ENST00000598808 IGLV5-48A0A075B6I7 105 aa11.99□□□□□ -0.49
IRF3-221ENST00000598808 GAGE2AQ6NT46 116 aa11.99□□□□□ -0.49
IRF3-221ENST00000598808 DSCR8Q96T75 97 aa11.99□□□□□ -0.49
IRF3-221ENST00000598808 CRYGAP11844 174 aa11.97□□□□□ -0.49
IRF3-221ENST00000598808 KRTAP10-8P60410 259 aa11.96□□□□□ -0.49
IRF3-221ENST00000598808 SPRR4Q96PI1 79 aa11.96□□□□□ -0.49
IRF3-221ENST00000598808 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
IRF3-221ENST00000598808 A0A087X002 238 aa11.95□□□□□ -0.5
IRF3-221ENST00000598808 Q8N377 158 aa11.95□□□□□ -0.5
IRF3-221ENST00000598808 LINC01547P58512 204 aaPredicted RBP11.94□□□□□ -0.5
IRF3-221ENST00000598808 Q6ZQT0 140 aa11.94□□□□□ -0.5
IRF3-221ENST00000598808 TRBV7-4A0A0J9YYF1 115 aa11.93□□□□□ -0.5
IRF3-221ENST00000598808 FAM229BQ4G0N7 80 aa11.92□□□□□ -0.5
IRF3-221ENST00000598808 TYMSOSQ8TAI1 123 aa11.92□□□□□ -0.5
IRF3-221ENST00000598808 HMCN2Q8NDA2 5059 aa11.91□□□□□ -0.5
IRF3-221ENST00000598808 LINC00643Q86TS7 51 aa11.91□□□□□ -0.5
IRF3-221ENST00000598808 DEFB105AQ8NG35 78 aa11.89□□□□□ -0.51
IRF3-221ENST00000598808 SCGB1A1P11684 91 aa11.89□□□□□ -0.51
IRF3-221ENST00000598808 ST20-AS1Q8NBB2 130 aa11.89□□□□□ -0.51
IRF3-221ENST00000598808 A0A1B0GV72 72 aa11.88□□□□□ -0.51
IRF3-221ENST00000598808 KRTAP13-2Q52LG2 175 aa11.87□□□□□ -0.51
IRF3-221ENST00000598808 A0A1B0GW54 56 aa11.86□□□□□ -0.51
IRF3-221ENST00000598808 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
IRF3-221ENST00000598808 SPRR1BP22528 89 aa11.85□□□□□ -0.51
IRF3-221ENST00000598808 C3orf22Q8N5N4 141 aa11.85□□□□□ -0.51
IRF3-221ENST00000598808 IGLV9-49A0A0B4J1Y8 123 aa11.83□□□□□ -0.52
IRF3-221ENST00000598808 F8WEM9 126 aa11.83□□□□□ -0.52
IRF3-221ENST00000598808 LINC00483Q53H64 154 aa11.83□□□□□ -0.52
IRF3-221ENST00000598808 Q6Q795 121 aa11.83□□□□□ -0.52
IRF3-221ENST00000598808 IMUPQ9GZP8 106 aa11.83□□□□□ -0.52
IRF3-221ENST00000598808 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
IRF3-221ENST00000598808 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
IRF3-221ENST00000598808 TRBV7-7A0A0K0K1E9 115 aa11.8□□□□□ -0.52
IRF3-221ENST00000598808 ATP5EP2Q5VTU8 51 aa11.8□□□□□ -0.52
IRF3-221ENST00000598808 IGLV8-61A0A075B6I0 122 aa11.79□□□□□ -0.52
IRF3-221ENST00000598808 C9orf153Q5TBE3 101 aa11.79□□□□□ -0.52
IRF3-221ENST00000598808 MOBPQ13875 183 aa11.78□□□□□ -0.52
IRF3-221ENST00000598808 Q6JHZ5 121 aa11.78□□□□□ -0.52
IRF3-221ENST00000598808 SMIM29Q86T20 159 aa11.78□□□□□ -0.52
IRF3-221ENST00000598808 LINC00304Q8N9R0 145 aa11.78□□□□□ -0.52
IRF3-221ENST00000598808 Q8NBF4 154 aa11.74□□□□□ -0.53
IRF3-221ENST00000598808 C4orf48Q5BLP8 95 aa11.72□□□□□ -0.53
IRF3-221ENST00000598808 Q6ZVQ6 151 aa11.68□□□□□ -0.54
IRF3-221ENST00000598808 A0A1W2PNM2 257 aa11.65□□□□□ -0.54
IRF3-221ENST00000598808 SSBP3-AS1Q7Z2R9 100 aa11.65□□□□□ -0.54
IRF3-221ENST00000598808 PCP4P48539 62 aa11.64□□□□□ -0.55
IRF3-221ENST00000598808 CXCL6P80162 114 aa11.64□□□□□ -0.55
IRF3-221ENST00000598808 SPAG11AQ6PDA7 123 aa11.64□□□□□ -0.55
IRF3-221ENST00000598808 IGFL1Q6UW32 110 aa11.63□□□□□ -0.55
IRF3-221ENST00000598808 PRR4Q16378 134 aa11.62□□□□□ -0.55
IRF3-221ENST00000598808 NREPQ16612 68 aa11.62□□□□□ -0.55
IRF3-221ENST00000598808 IGKV3D-7A0A0C4DH55 119 aa11.6□□□□□ -0.55
IRF3-221ENST00000598808 HRCT1Q6UXD1 115 aa11.59□□□□□ -0.55
IRF3-221ENST00000598808 RETNLBQ9BQ08 111 aa11.59□□□□□ -0.55
IRF3-221ENST00000598808 LRP2P98164 4655 aa11.58□□□□□ -0.56
IRF3-221ENST00000598808 UBR4Q5T4S7 5183 aa11.58□□□□□ -0.56
IRF3-221ENST00000598808 SPINK1P00995 79 aa11.57□□□□□ -0.56
IRF3-221ENST00000598808 A0A0G2JQZ4 141 aa11.51□□□□□ -0.57
IRF3-221ENST00000598808 BPY2O14599 106 aa11.51□□□□□ -0.57
IRF3-221ENST00000598808 HIST1H4AP62805 103 aaKnown RBP11.51□□□□□ -0.57
IRF3-221ENST00000598808 FAM236AA0A1B0GUQ0 79 aa11.5□□□□□ -0.57
IRF3-221ENST00000598808 FAM236BA0A1B0GV22 79 aa11.5□□□□□ -0.57
IRF3-221ENST00000598808 ANAPC13Q9BS18 74 aa11.46□□□□□ -0.57
IRF3-221ENST00000598808 LIMD2Q9BT23 127 aa11.46□□□□□ -0.57
IRF3-221ENST00000598808 A0A087WSZ3 146 aa11.45□□□□□ -0.58
IRF3-221ENST00000598808 RPS29P62273 56 aaKnown RBP11.45□□□□□ -0.58
IRF3-221ENST00000598808 ATOX1O00244 68 aa11.44□□□□□ -0.58
IRF3-221ENST00000598808 CD164Q04900 197 aa11.43□□□□□ -0.58
IRF3-221ENST00000598808 SS18L2Q9UHA2 77 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms