RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 SOSTDC1Q6X4U4 206 aa6.12□□□□□ -1.43
VRK3-214ENST00000598553 LINC00337Q8N6G1 96 aa6.12□□□□□ -1.43
VRK3-214ENST00000598553 KCNQ1DNQ9H478 68 aa6.12□□□□□ -1.43
VRK3-214ENST00000598553 MUC2Q02817 5179 aa6.11□□□□□ -1.43
VRK3-214ENST00000598553 SMCR5Q8TEV8 140 aa6.11□□□□□ -1.43
VRK3-214ENST00000598553 ZNF706Q9Y5V0 76 aaPredicted RBP6.11□□□□□ -1.43
VRK3-214ENST00000598553 ETDCA0A1B0GVM5 59 aa6.09□□□□□ -1.43
VRK3-214ENST00000598553 MUC17Q685J3 4493 aa6.08□□□□□ -1.44
VRK3-214ENST00000598553 TRACP01848 142 aa6.08□□□□□ -1.44
VRK3-214ENST00000598553 C21orf62-AS1Q17RA5 79 aa6.08□□□□□ -1.44
VRK3-214ENST00000598553 Q9BRP9 147 aa6.08□□□□□ -1.44
VRK3-214ENST00000598553 B5MCH6 92 aa6.07□□□□□ -1.44
VRK3-214ENST00000598553 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
VRK3-214ENST00000598553 Q8NBF4 154 aa6.07□□□□□ -1.44
VRK3-214ENST00000598553 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
VRK3-214ENST00000598553 H0YGX0 51 aa6.06□□□□□ -1.44
VRK3-214ENST00000598553 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
VRK3-214ENST00000598553 SPAG11AQ6PDA7 123 aa6.06□□□□□ -1.44
VRK3-214ENST00000598553 CLEC2BQ92478 149 aa6.06□□□□□ -1.44
VRK3-214ENST00000598553 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
VRK3-214ENST00000598553 NDUFC2O95298 119 aa6.05□□□□□ -1.44
VRK3-214ENST00000598553 GAGE2AQ6NT46 116 aa6.05□□□□□ -1.44
VRK3-214ENST00000598553 FAM240AA0A1B0GVK7 77 aa6.04□□□□□ -1.44
VRK3-214ENST00000598553 IGLV6-57P01721 117 aa6.04□□□□□ -1.44
VRK3-214ENST00000598553 Q6ZRX8 168 aa6.04□□□□□ -1.44
VRK3-214ENST00000598553 ACYP1P07311 99 aa6.03□□□□□ -1.44
VRK3-214ENST00000598553 TRAV23DV6A0A075B6W5 121 aa6.02□□□□□ -1.45
VRK3-214ENST00000598553 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
VRK3-214ENST00000598553 MOBPQ13875 183 aa6.02□□□□□ -1.45
VRK3-214ENST00000598553 C4orf48Q5BLP8 95 aa6.02□□□□□ -1.45
VRK3-214ENST00000598553 S100A7L2Q5SY68 101 aa6.02□□□□□ -1.45
VRK3-214ENST00000598553 ST20-AS1Q8NBB2 130 aa6.02□□□□□ -1.45
VRK3-214ENST00000598553 IGLV9-49A0A0B4J1Y8 123 aa6.01□□□□□ -1.45
VRK3-214ENST00000598553 TEX49A0A1B0GTD5 131 aa6.01□□□□□ -1.45
VRK3-214ENST00000598553 DNAL4O96015 105 aa6.01□□□□□ -1.45
VRK3-214ENST00000598553 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
VRK3-214ENST00000598553 FP248Q71RG6 208 aaPredicted RBP6.01□□□□□ -1.45
VRK3-214ENST00000598553 A0A1B0GV72 72 aa6□□□□□ -1.45
VRK3-214ENST00000598553 A0A1B0GX51 115 aa6□□□□□ -1.45
VRK3-214ENST00000598553 SNCGO76070 127 aa6□□□□□ -1.45
VRK3-214ENST00000598553 SPINK1P00995 79 aa6□□□□□ -1.45
VRK3-214ENST00000598553 BAALC-AS2P0C853 105 aa6□□□□□ -1.45
VRK3-214ENST00000598553 SMIM11BQ8TCY0 68 aa6□□□□□ -1.45
VRK3-214ENST00000598553 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
VRK3-214ENST00000598553 ZNF73O43830 326 aaPredicted RBP5.99□□□□□ -1.45
VRK3-214ENST00000598553 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
VRK3-214ENST00000598553 KRTAP13-3Q3SY46 172 aa5.99□□□□□ -1.45
VRK3-214ENST00000598553 OR13C6PQ8NH95 151 aa5.99□□□□□ -1.45
VRK3-214ENST00000598553 Q6Q795 121 aa5.98□□□□□ -1.45
VRK3-214ENST00000598553 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
VRK3-214ENST00000598553 SSBP3-AS1Q7Z2R9 100 aa5.97□□□□□ -1.45
VRK3-214ENST00000598553 Q8N377 158 aa5.97□□□□□ -1.45
VRK3-214ENST00000598553 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
VRK3-214ENST00000598553 FAM218AQ96MZ4 157 aa5.96□□□□□ -1.46
VRK3-214ENST00000598553 H3BQ85 93 aa5.94□□□□□ -1.46
VRK3-214ENST00000598553 C9orf153Q5TBE3 101 aa5.94□□□□□ -1.46
VRK3-214ENST00000598553 ORMDL1Q9P0S3 153 aa5.94□□□□□ -1.46
VRK3-214ENST00000598553 IMUPQ9GZP8 106 aa5.93□□□□□ -1.46
VRK3-214ENST00000598553 LINC00643Q86TS7 51 aa5.92□□□□□ -1.46
VRK3-214ENST00000598553 OBSCN-AS1Q96MR7 158 aa5.92□□□□□ -1.46
VRK3-214ENST00000598553 DHRS4-AS1Q9P1J3 65 aa5.92□□□□□ -1.46
VRK3-214ENST00000598553 TRBV7-7A0A0K0K1E9 115 aa5.91□□□□□ -1.46
VRK3-214ENST00000598553 JMJD7-PLA2G4BH0Y9G9 81 aa5.91□□□□□ -1.46
VRK3-214ENST00000598553 TMEM256-PLSCR3K7ERE1 68 aa5.91□□□□□ -1.46
VRK3-214ENST00000598553 GHRHP01286 108 aa5.91□□□□□ -1.46
VRK3-214ENST00000598553 SPRR1BP22528 89 aa5.91□□□□□ -1.46
VRK3-214ENST00000598553 ELOF1P60002 83 aaKnown RBP5.91□□□□□ -1.46
VRK3-214ENST00000598553 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
VRK3-214ENST00000598553 A0A0G2JQZ4 141 aa5.9□□□□□ -1.46
VRK3-214ENST00000598553 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
VRK3-214ENST00000598553 C6orf99Q4VX62 202 aa5.9□□□□□ -1.46
VRK3-214ENST00000598553 HRCT1Q6UXD1 115 aa5.9□□□□□ -1.46
VRK3-214ENST00000598553 COX7BP24311 80 aa5.89□□□□□ -1.47
VRK3-214ENST00000598553 ANAPC13Q9BS18 74 aa5.89□□□□□ -1.47
VRK3-214ENST00000598553 TRBV7-6A0A0J9YX20 115 aa5.87□□□□□ -1.47
VRK3-214ENST00000598553 NDUFV3P56181 108 aaKnown RBP5.87□□□□□ -1.47
VRK3-214ENST00000598553 LINC01547P58512 204 aaPredicted RBP5.87□□□□□ -1.47
VRK3-214ENST00000598553 XP32Q5T750 250 aa5.87□□□□□ -1.47
VRK3-214ENST00000598553 LINC00575Q6W349 94 aa5.87□□□□□ -1.47
VRK3-214ENST00000598553 LAMTOR3Q9UHA4 124 aa5.87□□□□□ -1.47
VRK3-214ENST00000598553 hADV29S1A0JD25 119 aa5.86□□□□□ -1.47
VRK3-214ENST00000598553 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
VRK3-214ENST00000598553 SMIM29Q86T20 159 aa5.86□□□□□ -1.47
VRK3-214ENST00000598553 DEFB105AQ8NG35 78 aa5.86□□□□□ -1.47
VRK3-214ENST00000598553 LIMD2Q9BT23 127 aa5.85□□□□□ -1.47
VRK3-214ENST00000598553 C14orf132Q9NPU4 83 aa5.85□□□□□ -1.47
VRK3-214ENST00000598553 CCKP06307 115 aa5.84□□□□□ -1.47
VRK3-214ENST00000598553 PDE6GP18545 87 aa5.84□□□□□ -1.47
VRK3-214ENST00000598553 KRTAP19-2Q3LHN2 52 aa5.83□□□□□ -1.48
VRK3-214ENST00000598553 Q6JHZ5 121 aa5.83□□□□□ -1.48
VRK3-214ENST00000598553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.83□□□□□ -1.48
VRK3-214ENST00000598553 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
VRK3-214ENST00000598553 CD164Q04900 197 aa5.82□□□□□ -1.48
VRK3-214ENST00000598553 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
VRK3-214ENST00000598553 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
VRK3-214ENST00000598553 IGLV5-48A0A075B6I7 105 aa5.81□□□□□ -1.48
VRK3-214ENST00000598553 LOC110117498A0A087WWA1 95 aa5.8□□□□□ -1.48
VRK3-214ENST00000598553 RBM3P98179 157 aaKnown RBP5.8□□□□□ -1.48
VRK3-214ENST00000598553 FAM236AA0A1B0GUQ0 79 aa5.78□□□□□ -1.48
VRK3-214ENST00000598553 FAM236BA0A1B0GV22 79 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms