RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 C5orf47Q569G3 176 aa12.27□□□□□ -0.44
LSM4-203ENST00000593829 Q8NDZ9 215 aa12.27□□□□□ -0.44
LSM4-203ENST00000593829 ABCA13Q86UQ4 5058 aa12.27□□□□□ -0.44
LSM4-203ENST00000593829 VPS13BQ7Z7G8 4022 aa12.27□□□□□ -0.44
LSM4-203ENST00000593829 PCLOQ9Y6V0 5065 aa12.26□□□□□ -0.45
LSM4-203ENST00000593829 IGLV6-57P01721 117 aa12.26□□□□□ -0.45
LSM4-203ENST00000593829 FAM19A1Q7Z5A9 133 aa12.26□□□□□ -0.45
LSM4-203ENST00000593829 KRTAP10-4P60372 401 aaPredicted RBP12.25□□□□□ -0.45
LSM4-203ENST00000593829 FAM168BA1KXE4 195 aa12.25□□□□□ -0.45
LSM4-203ENST00000593829 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
LSM4-203ENST00000593829 XAGE1AQ9HD64 81 aa12.23□□□□□ -0.45
LSM4-203ENST00000593829 TRAV7A0A075B6U4 112 aa12.21□□□□□ -0.45
LSM4-203ENST00000593829 CXCL6P80162 114 aa12.2□□□□□ -0.46
LSM4-203ENST00000593829 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
LSM4-203ENST00000593829 KRTAP7-1Q8IUC3 87 aa12.19□□□□□ -0.46
LSM4-203ENST00000593829 DSCR8Q96T75 97 aa12.19□□□□□ -0.46
LSM4-203ENST00000593829 LAMTOR3Q9UHA4 124 aa12.19□□□□□ -0.46
LSM4-203ENST00000593829 OXTP01178 125 aa12.18□□□□□ -0.46
LSM4-203ENST00000593829 LINC01547P58512 204 aaPredicted RBP12.18□□□□□ -0.46
LSM4-203ENST00000593829 Q6ZVQ6 151 aa12.17□□□□□ -0.46
LSM4-203ENST00000593829 TRBV7-6A0A0J9YX20 115 aa12.17□□□□□ -0.46
LSM4-203ENST00000593829 SERTAD4-AS1Q5TG53 156 aa12.16□□□□□ -0.46
LSM4-203ENST00000593829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.16□□□□□ -0.46
LSM4-203ENST00000593829 Q6ZQY7 126 aa12.14□□□□□ -0.47
LSM4-203ENST00000593829 C20orf197Q8N268 126 aa12.14□□□□□ -0.47
LSM4-203ENST00000593829 DIRC1Q969H9 104 aa12.14□□□□□ -0.47
LSM4-203ENST00000593829 PLA2G2DQ9UNK4 145 aa12.14□□□□□ -0.47
LSM4-203ENST00000593829 TRBV7-4A0A0J9YYF1 115 aa12.13□□□□□ -0.47
LSM4-203ENST00000593829 KLKP1Q107X0 134 aa12.13□□□□□ -0.47
LSM4-203ENST00000593829 FAM236DA0A1B0GTK5 79 aa12.11□□□□□ -0.47
LSM4-203ENST00000593829 FAM236CP0DP71 79 aa12.11□□□□□ -0.47
LSM4-203ENST00000593829 UBE2BP63146 152 aa12.11□□□□□ -0.47
LSM4-203ENST00000593829 PSORS1C2Q9UIG4 136 aa12.11□□□□□ -0.47
LSM4-203ENST00000593829 H7BZZ5 65 aa12.09□□□□□ -0.47
LSM4-203ENST00000593829 Q5XG85 94 aa12.09□□□□□ -0.47
LSM4-203ENST00000593829 COX7BP24311 80 aa12.09□□□□□ -0.47
LSM4-203ENST00000593829 ELOF1P60002 83 aaKnown RBP12.09□□□□□ -0.47
LSM4-203ENST00000593829 MRPL55Q7Z7F7 128 aaKnown RBP12.09□□□□□ -0.47
LSM4-203ENST00000593829 IGLV5-37A0A075B6J1 123 aa12.08□□□□□ -0.48
LSM4-203ENST00000593829 KRTAP11-1Q8IUC1 163 aa12.08□□□□□ -0.48
LSM4-203ENST00000593829 SERP1Q9Y6X1 66 aa12.08□□□□□ -0.48
LSM4-203ENST00000593829 FLG2Q5D862 2391 aaPredicted RBP12.08□□□□□ -0.48
LSM4-203ENST00000593829 ZNF73O43830 326 aaPredicted RBP12.07□□□□□ -0.48
LSM4-203ENST00000593829 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
LSM4-203ENST00000593829 NKAPP1Q8N9T2 125 aa12.07□□□□□ -0.48
LSM4-203ENST00000593829 VPREB1P12018 145 aa12.04□□□□□ -0.48
LSM4-203ENST00000593829 NDUFC1O43677 76 aa12.03□□□□□ -0.48
LSM4-203ENST00000593829 MYCBP2O75592 4640 aa12.02□□□□□ -0.48
LSM4-203ENST00000593829 SPINK6Q6UWN8 80 aa12.02□□□□□ -0.49
LSM4-203ENST00000593829 M0R378 163 aa12.01□□□□□ -0.49
LSM4-203ENST00000593829 PKHD1L1Q86WI1 4243 aa12.01□□□□□ -0.49
LSM4-203ENST00000593829 RPL37AP8A6NKH3 93 aa12□□□□□ -0.49
LSM4-203ENST00000593829 IGLV7-43P04211 117 aa12□□□□□ -0.49
LSM4-203ENST00000593829 ERC2-IT1O76042 136 aa11.99□□□□□ -0.49
LSM4-203ENST00000593829 C4orf26Q17RF5 130 aa11.99□□□□□ -0.49
LSM4-203ENST00000593829 KRTAP29-1A8MX34 341 aaPredicted RBP11.99□□□□□ -0.49
LSM4-203ENST00000593829 ATP5EP56381 51 aaPredicted RBP11.98□□□□□ -0.49
LSM4-203ENST00000593829 IGLV1-50A0A075B6I6 118 aa11.94□□□□□ -0.5
LSM4-203ENST00000593829 J3QL48 77 aa11.94□□□□□ -0.5
LSM4-203ENST00000593829 HRCT1Q6UXD1 115 aa11.93□□□□□ -0.5
LSM4-203ENST00000593829 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
LSM4-203ENST00000593829 F8WEM9 126 aa11.92□□□□□ -0.5
LSM4-203ENST00000593829 NREPQ16612 68 aa11.92□□□□□ -0.5
LSM4-203ENST00000593829 SNURFQ9Y675 71 aa11.91□□□□□ -0.5
LSM4-203ENST00000593829 LRP1Q07954 4544 aaKnown RBP11.91□□□□□ -0.5
LSM4-203ENST00000593829 SMIM26A0A096LP01 95 aa11.9□□□□□ -0.5
LSM4-203ENST00000593829 ZNF861PO60384 105 aa11.9□□□□□ -0.5
LSM4-203ENST00000593829 A0A1B0GW54 56 aa11.9□□□□□ -0.51
LSM4-203ENST00000593829 BPY2O14599 106 aa11.89□□□□□ -0.51
LSM4-203ENST00000593829 FAT3Q8TDW7 4589 aa11.88□□□□□ -0.51
LSM4-203ENST00000593829 H0Y9J4 135 aa11.88□□□□□ -0.51
LSM4-203ENST00000593829 IGKV4-1P06312 121 aa11.88□□□□□ -0.51
LSM4-203ENST00000593829 DMBT1Q9UGM3 2413 aaPredicted RBP11.88□□□□□ -0.51
LSM4-203ENST00000593829 TMEM254Q8TBM7 123 aa11.86□□□□□ -0.51
LSM4-203ENST00000593829 KCNQ1DNQ9H478 68 aa11.86□□□□□ -0.51
LSM4-203ENST00000593829 UBE2AP49459 152 aa11.85□□□□□ -0.51
LSM4-203ENST00000593829 OCR1Q9BZK8 76 aa11.84□□□□□ -0.51
LSM4-203ENST00000593829 IGLV5-48A0A075B6I7 105 aa11.84□□□□□ -0.51
LSM4-203ENST00000593829 PRYO14603 147 aa11.82□□□□□ -0.52
LSM4-203ENST00000593829 KRTAP13-1Q8IUC0 172 aa11.82□□□□□ -0.52
LSM4-203ENST00000593829 A0A0U1RQV1 116 aa11.81□□□□□ -0.52
LSM4-203ENST00000593829 MT1HL1P0DM35 61 aa11.8□□□□□ -0.52
LSM4-203ENST00000593829 FP248Q71RG6 208 aaPredicted RBP11.8□□□□□ -0.52
LSM4-203ENST00000593829 PRLHP81277 87 aa11.79□□□□□ -0.52
LSM4-203ENST00000593829 Q8N377 158 aa11.78□□□□□ -0.52
LSM4-203ENST00000593829 SPRR1AP35321 89 aa11.77□□□□□ -0.53
LSM4-203ENST00000593829 DHRS4-AS1Q9P1J3 65 aa11.77□□□□□ -0.53
LSM4-203ENST00000593829 KRTAP1-4P0C5Y4 121 aa11.75□□□□□ -0.53
LSM4-203ENST00000593829 KRTAP10-8P60410 259 aa11.74□□□□□ -0.53
LSM4-203ENST00000593829 Q8N9L7 120 aa11.74□□□□□ -0.53
LSM4-203ENST00000593829 PRO0628Q9UI54 55 aa11.74□□□□□ -0.53
LSM4-203ENST00000593829 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
LSM4-203ENST00000593829 KRTAP4-16G5E9R7 235 aaPredicted RBP11.73□□□□□ -0.53
LSM4-203ENST00000593829 HERC1Q15751 4861 aa11.72□□□□□ -0.53
LSM4-203ENST00000593829 HIGD2AQ9BW72 106 aa11.72□□□□□ -0.53
LSM4-203ENST00000593829 Q6ZRX8 168 aa11.71□□□□□ -0.53
LSM4-203ENST00000593829 PRR26Q8N8Z3 221 aa11.71□□□□□ -0.53
LSM4-203ENST00000593829 A0A1W2PNM2 257 aa11.68□□□□□ -0.54
LSM4-203ENST00000593829 SPRR4Q96PI1 79 aa11.68□□□□□ -0.54
LSM4-203ENST00000593829 Q8NBF4 154 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms