RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 ANAPC11Q9NYG5 84 aa15.4■□□□□ 0.06
LDLRAD4-218ENST00000592991 LAMTOR3Q9UHA4 124 aa15.4■□□□□ 0.06
LDLRAD4-218ENST00000592991 SMIM29Q86T20 159 aa15.39■□□□□ 0.05
LDLRAD4-218ENST00000592991 H3BQ85 93 aa15.37■□□□□ 0.05
LDLRAD4-218ENST00000592991 GHRHP01286 108 aa15.37■□□□□ 0.05
LDLRAD4-218ENST00000592991 NDUFV3P56181 108 aaKnown RBP15.37■□□□□ 0.05
LDLRAD4-218ENST00000592991 ZNF706Q9Y5V0 76 aaPredicted RBP15.36■□□□□ 0.05
LDLRAD4-218ENST00000592991 SPRR1BP22528 89 aa15.35■□□□□ 0.05
LDLRAD4-218ENST00000592991 CDIP1Q9H305 208 aa15.35■□□□□ 0.05
LDLRAD4-218ENST00000592991 FAM229AH3BQW9 127 aa15.35■□□□□ 0.05
LDLRAD4-218ENST00000592991 Q5VSD8 79 aa15.35■□□□□ 0.05
LDLRAD4-218ENST00000592991 FAM240AA0A1B0GVK7 77 aa15.32■□□□□ 0.04
LDLRAD4-218ENST00000592991 LINC00483Q53H64 154 aa15.32■□□□□ 0.04
LDLRAD4-218ENST00000592991 PKHD1L1Q86WI1 4243 aa15.32■□□□□ 0.04
LDLRAD4-218ENST00000592991 JMJD7-PLA2G4BH0Y9G9 81 aa15.31■□□□□ 0.04
LDLRAD4-218ENST00000592991 PLA2G1BP04054 148 aaKnown RBP15.31■□□□□ 0.04
LDLRAD4-218ENST00000592991 BIRC6Q9NR09 4857 aa15.3■□□□□ 0.04
LDLRAD4-218ENST00000592991 SPINK6Q6UWN8 80 aa15.29■□□□□ 0.04
LDLRAD4-218ENST00000592991 C14orf132Q9NPU4 83 aa15.29■□□□□ 0.04
LDLRAD4-218ENST00000592991 ACYP1P07311 99 aa15.26■□□□□ 0.03
LDLRAD4-218ENST00000592991 IGLV9-49A0A0B4J1Y8 123 aa15.25■□□□□ 0.03
LDLRAD4-218ENST00000592991 KRTAP1-4P0C5Y4 121 aa15.25■□□□□ 0.03
LDLRAD4-218ENST00000592991 RBM3P98179 157 aaKnown RBP15.25■□□□□ 0.03
LDLRAD4-218ENST00000592991 F8WEM9 126 aa15.24■□□□□ 0.03
LDLRAD4-218ENST00000592991 A0A0G2JQZ4 141 aa15.23■□□□□ 0.03
LDLRAD4-218ENST00000592991 SIGMAR1Q99720 223 aa15.23■□□□□ 0.03
LDLRAD4-218ENST00000592991 Q8N1X5 172 aa15.22■□□□□ 0.03
LDLRAD4-218ENST00000592991 A0A087X002 238 aa15.2■□□□□ 0.02
LDLRAD4-218ENST00000592991 C9orf153Q5TBE3 101 aa15.19■□□□□ 0.02
LDLRAD4-218ENST00000592991 MOBPQ13875 183 aa15.17■□□□□ 0.02
LDLRAD4-218ENST00000592991 DSCR8Q96T75 97 aa15.17■□□□□ 0.02
LDLRAD4-218ENST00000592991 TRBV7-4A0A0J9YYF1 115 aa15.17■□□□□ 0.02
LDLRAD4-218ENST00000592991 CCKP06307 115 aa15.16■□□□□ 0.02
LDLRAD4-218ENST00000592991 IGLV8-61A0A075B6I0 122 aa15.14■□□□□ 0.01
LDLRAD4-218ENST00000592991 KRTAP13-2Q52LG2 175 aa15.14■□□□□ 0.01
LDLRAD4-218ENST00000592991 IGFL1Q6UW32 110 aa15.14■□□□□ 0.01
LDLRAD4-218ENST00000592991 Q6ZQT0 140 aa15.14■□□□□ 0.01
LDLRAD4-218ENST00000592991 LOC110117498A0A087WWA1 95 aa15.13■□□□□ 0.01
LDLRAD4-218ENST00000592991 FAM229BQ4G0N7 80 aa15.12■□□□□ 0.01
LDLRAD4-218ENST00000592991 MT-ATP8P03928 68 aa15.11■□□□□ 0.01
LDLRAD4-218ENST00000592991 Q8NBF4 154 aa15.09■□□□□ 0.01
LDLRAD4-218ENST00000592991 CRYGAP11844 174 aa15.08■□□□□ 0
LDLRAD4-218ENST00000592991 PDE6GP18545 87 aa15.08■□□□□ 0
LDLRAD4-218ENST00000592991 A0A1W2PNM2 257 aa15.06■□□□□ 0
LDLRAD4-218ENST00000592991 PRR26Q8N8Z3 221 aa15.06■□□□□ 0
LDLRAD4-218ENST00000592991 KRTAP4-5Q9BYR2 181 aa15.06■□□□□ 0
LDLRAD4-218ENST00000592991 LRP1Q07954 4544 aaKnown RBP15.06■□□□□ 0
LDLRAD4-218ENST00000592991 HERC2O95714 4834 aa15.05■□□□□ -0
LDLRAD4-218ENST00000592991 Q6JHZ5 121 aa15.04■□□□□ -0
LDLRAD4-218ENST00000592991 LINC00846Q9NV44 126 aa15.03■□□□□ -0
LDLRAD4-218ENST00000592991 FAT3Q8TDW7 4589 aa15.02■□□□□ -0
LDLRAD4-218ENST00000592991 LINC00643Q86TS7 51 aa15.02□□□□□ -0.01
LDLRAD4-218ENST00000592991 HRCT1Q6UXD1 115 aa15□□□□□ -0.01
LDLRAD4-218ENST00000592991 FLG2Q5D862 2391 aaPredicted RBP15□□□□□ -0.01
LDLRAD4-218ENST00000592991 C21orf62-AS1Q17RA5 79 aa14.99□□□□□ -0.01
LDLRAD4-218ENST00000592991 SCGB1A1P11684 91 aa14.98□□□□□ -0.01
LDLRAD4-218ENST00000592991 TYMSOSQ8TAI1 123 aa14.98□□□□□ -0.01
LDLRAD4-218ENST00000592991 SSBP3-AS1Q7Z2R9 100 aa14.96□□□□□ -0.01
LDLRAD4-218ENST00000592991 MYCBP2O75592 4640 aa14.93□□□□□ -0.02
LDLRAD4-218ENST00000592991 Q6Q795 121 aa14.92□□□□□ -0.02
LDLRAD4-218ENST00000592991 TNXBP22105 4242 aa14.9□□□□□ -0.02
LDLRAD4-218ENST00000592991 TRBV7-7A0A0K0K1E9 115 aa14.9□□□□□ -0.02
LDLRAD4-218ENST00000592991 A0A087WSZ3 146 aa14.88□□□□□ -0.03
LDLRAD4-218ENST00000592991 ABCA13Q86UQ4 5058 aa14.87□□□□□ -0.03
LDLRAD4-218ENST00000592991 IMUPQ9GZP8 106 aa14.87□□□□□ -0.03
LDLRAD4-218ENST00000592991 PCP4P48539 62 aa14.86□□□□□ -0.03
LDLRAD4-218ENST00000592991 UBL5Q9BZL1 73 aa14.85□□□□□ -0.03
LDLRAD4-218ENST00000592991 LINC00304Q8N9R0 145 aa14.8□□□□□ -0.04
LDLRAD4-218ENST00000592991 A0A1B0GW54 56 aa14.79□□□□□ -0.04
LDLRAD4-218ENST00000592991 CD164Q04900 197 aa14.78□□□□□ -0.04
LDLRAD4-218ENST00000592991 KRTAP10-8P60410 259 aa14.77□□□□□ -0.04
LDLRAD4-218ENST00000592991 ATP5EP2Q5VTU8 51 aa14.77□□□□□ -0.04
LDLRAD4-218ENST00000592991 Q6ZVQ6 151 aa14.77□□□□□ -0.04
LDLRAD4-218ENST00000592991 IGKV3D-7A0A0C4DH55 119 aa14.76□□□□□ -0.05
LDLRAD4-218ENST00000592991 C4orf48Q5BLP8 95 aa14.75□□□□□ -0.05
LDLRAD4-218ENST00000592991 MT1HL1P0DM35 61 aa14.72□□□□□ -0.05
LDLRAD4-218ENST00000592991 NREPQ16612 68 aa14.72□□□□□ -0.05
LDLRAD4-218ENST00000592991 DEFB116Q30KQ4 102 aa14.69□□□□□ -0.06
LDLRAD4-218ENST00000592991 SPINK1P00995 79 aa14.67□□□□□ -0.06
LDLRAD4-218ENST00000592991 SPAG11AQ6PDA7 123 aa14.66□□□□□ -0.06
LDLRAD4-218ENST00000592991 SS18L2Q9UHA2 77 aa14.66□□□□□ -0.06
LDLRAD4-218ENST00000592991 CXCL6P80162 114 aa14.65□□□□□ -0.06
LDLRAD4-218ENST00000592991 OXTP01178 125 aa14.64□□□□□ -0.07
LDLRAD4-218ENST00000592991 Q96NJ1 140 aa14.63□□□□□ -0.07
LDLRAD4-218ENST00000592991 LINC00472Q9H8W2 130 aa14.62□□□□□ -0.07
LDLRAD4-218ENST00000592991 LIMD2Q9BT23 127 aa14.61□□□□□ -0.07
LDLRAD4-218ENST00000592991 FAM236AA0A1B0GUQ0 79 aa14.59□□□□□ -0.07
LDLRAD4-218ENST00000592991 FAM236BA0A1B0GV22 79 aa14.59□□□□□ -0.07
LDLRAD4-218ENST00000592991 Q5XG85 94 aa14.59□□□□□ -0.07
LDLRAD4-218ENST00000592991 KRTAP29-1A8MX34 341 aaPredicted RBP14.58□□□□□ -0.08
LDLRAD4-218ENST00000592991 DMBT1Q9UGM3 2413 aaPredicted RBP14.57□□□□□ -0.08
LDLRAD4-218ENST00000592991 HIST1H4AP62805 103 aaKnown RBP14.56□□□□□ -0.08
LDLRAD4-218ENST00000592991 BPY2O14599 106 aa14.55□□□□□ -0.08
LDLRAD4-218ENST00000592991 RPS29P62273 56 aaKnown RBP14.55□□□□□ -0.08
LDLRAD4-218ENST00000592991 A0A087WVE0 104 aa14.55□□□□□ -0.08
LDLRAD4-218ENST00000592991 ASB16-AS1Q495Z4 193 aa14.54□□□□□ -0.08
LDLRAD4-218ENST00000592991 C1orf195Q5TG92 126 aa14.54□□□□□ -0.08
LDLRAD4-218ENST00000592991 IGKV4-1P06312 121 aa14.52□□□□□ -0.09
LDLRAD4-218ENST00000592991 Q8N9L7 120 aa14.52□□□□□ -0.09
LDLRAD4-218ENST00000592991 ANAPC13Q9BS18 74 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms