RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 APLNQ9ULZ1 77 aa7.23□□□□□ -1.25
ZNF540-210ENST00000592533 DNAH9Q9NYC9 4486 aa7.23□□□□□ -1.25
ZNF540-210ENST00000592533 FAM229BQ4G0N7 80 aa7.23□□□□□ -1.25
ZNF540-210ENST00000592533 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-210ENST00000592533 A0A0G2JQZ4 141 aa7.22□□□□□ -1.25
ZNF540-210ENST00000592533 PKIGQ9Y2B9 76 aa7.22□□□□□ -1.25
ZNF540-210ENST00000592533 LYSTQ99698 3801 aa7.22□□□□□ -1.25
ZNF540-210ENST00000592533 A0A087WSZ3 146 aa7.22□□□□□ -1.25
ZNF540-210ENST00000592533 UBE2AP49459 152 aa7.22□□□□□ -1.25
ZNF540-210ENST00000592533 KRTAP11-1Q8IUC1 163 aa7.22□□□□□ -1.25
ZNF540-210ENST00000592533 KRTAP29-1A8MX34 341 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-210ENST00000592533 hDV103S1A0JD37 113 aa7.2□□□□□ -1.26
ZNF540-210ENST00000592533 LINC00336Q6ZUF6 198 aa7.2□□□□□ -1.26
ZNF540-210ENST00000592533 PHF5AQ7RTV0 110 aaKnown RBP7.19□□□□□ -1.26
ZNF540-210ENST00000592533 C9orf163Q8N9P6 203 aa7.19□□□□□ -1.26
ZNF540-210ENST00000592533 CYP4F30PQ9H0H9 118 aa7.19□□□□□ -1.26
ZNF540-210ENST00000592533 PRO0628Q9UI54 55 aa7.19□□□□□ -1.26
ZNF540-210ENST00000592533 LRCOL1A6NCL2 159 aa7.18□□□□□ -1.26
ZNF540-210ENST00000592533 UBE2DNLQ8IWF7 75 aa7.18□□□□□ -1.26
ZNF540-210ENST00000592533 CHTF8P0CG12 524 aa7.18□□□□□ -1.26
ZNF540-210ENST00000592533 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
ZNF540-210ENST00000592533 COL6A5A8TX70 2615 aa7.17□□□□□ -1.26
ZNF540-210ENST00000592533 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
ZNF540-210ENST00000592533 LINC00472Q9H8W2 130 aa7.17□□□□□ -1.26
ZNF540-210ENST00000592533 NDUFB1O75438 58 aa7.17□□□□□ -1.26
ZNF540-210ENST00000592533 STAB2Q8WWQ8 2551 aa7.17□□□□□ -1.26
ZNF540-210ENST00000592533 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
ZNF540-210ENST00000592533 DEFB116Q30KQ4 102 aa7.16□□□□□ -1.26
ZNF540-210ENST00000592533 A8MWP4 228 aa7.15□□□□□ -1.26
ZNF540-210ENST00000592533 H3BPC8 53 aa7.15□□□□□ -1.27
ZNF540-210ENST00000592533 B9D2Q9BPU9 175 aa7.15□□□□□ -1.27
ZNF540-210ENST00000592533 WFDC13Q8IUB5 93 aa7.14□□□□□ -1.27
ZNF540-210ENST00000592533 C1orf64Q8NEQ6 169 aa7.14□□□□□ -1.27
ZNF540-210ENST00000592533 MP68P56378 58 aa7.14□□□□□ -1.27
ZNF540-210ENST00000592533 Q6ZRN7 208 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-210ENST00000592533 DNAH7Q8WXX0 4024 aa7.13□□□□□ -1.27
ZNF540-210ENST00000592533 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
ZNF540-210ENST00000592533 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
ZNF540-210ENST00000592533 CASC2Q6XLA1 102 aa7.12□□□□□ -1.27
ZNF540-210ENST00000592533 NBDYA0A0U1RRE5 68 aa7.12□□□□□ -1.27
ZNF540-210ENST00000592533 Q1T7F1 81 aa7.12□□□□□ -1.27
ZNF540-210ENST00000592533 CSMD3Q7Z407 3707 aa7.12□□□□□ -1.27
ZNF540-210ENST00000592533 MPLKIPQ8TAP9 179 aa7.11□□□□□ -1.27
ZNF540-210ENST00000592533 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
ZNF540-210ENST00000592533 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
ZNF540-210ENST00000592533 MGAM2Q2M2H8 2515 aa7.09□□□□□ -1.27
ZNF540-210ENST00000592533 PANO1I0J062 215 aa7.09□□□□□ -1.27
ZNF540-210ENST00000592533 SPACA4Q8TDM5 124 aa7.09□□□□□ -1.27
ZNF540-210ENST00000592533 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
ZNF540-210ENST00000592533 MMP24-AS1A0A0U1RRL7 71 aa7.07□□□□□ -1.28
ZNF540-210ENST00000592533 H0Y9P7 68 aa7.07□□□□□ -1.28
ZNF540-210ENST00000592533 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
ZNF540-210ENST00000592533 NUPR2A6NF83 97 aa7.07□□□□□ -1.28
ZNF540-210ENST00000592533 LINC00208Q96KT6 92 aa7.07□□□□□ -1.28
ZNF540-210ENST00000592533 Q96NJ1 140 aa7.06□□□□□ -1.28
ZNF540-210ENST00000592533 PLECQ15149 4684 aaKnown RBP7.06□□□□□ -1.28
ZNF540-210ENST00000592533 MDFIQ99750 246 aa7.05□□□□□ -1.28
ZNF540-210ENST00000592533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
ZNF540-210ENST00000592533 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
ZNF540-210ENST00000592533 VPS13DQ5THJ4 4388 aa7.03□□□□□ -1.28
ZNF540-210ENST00000592533 TENM2Q9NT68 2774 aa7.02□□□□□ -1.28
ZNF540-210ENST00000592533 MOBPQ13875 183 aa7.02□□□□□ -1.29
ZNF540-210ENST00000592533 HECTD4Q9Y4D8 3996 aa7.01□□□□□ -1.29
ZNF540-210ENST00000592533 ZNF706Q9Y5V0 76 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-210ENST00000592533 PRR4Q16378 134 aa7.01□□□□□ -1.29
ZNF540-210ENST00000592533 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
ZNF540-210ENST00000592533 V9GYY9 64 aa7□□□□□ -1.29
ZNF540-210ENST00000592533 A0A087WTM6 91 aa6.99□□□□□ -1.29
ZNF540-210ENST00000592533 WWC2-AS2Q96NR7 200 aa6.99□□□□□ -1.29
ZNF540-210ENST00000592533 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
ZNF540-210ENST00000592533 IGLV5-52A0A0A0MRZ9 124 aa6.98□□□□□ -1.29
ZNF540-210ENST00000592533 IGLV9-49A0A0B4J1Y8 123 aa6.98□□□□□ -1.29
ZNF540-210ENST00000592533 Q6ZR54 194 aa6.98□□□□□ -1.29
ZNF540-210ENST00000592533 C8orf17Q9NRJ1 99 aa6.97□□□□□ -1.29
ZNF540-210ENST00000592533 PLAC8Q9NZF1 115 aa6.97□□□□□ -1.29
ZNF540-210ENST00000592533 IGLV7-46A0A075B6I9 117 aa6.96□□□□□ -1.29
ZNF540-210ENST00000592533 PSORS1C2Q9UIG4 136 aa6.96□□□□□ -1.3
ZNF540-210ENST00000592533 STARD9Q9P2P6 4700 aa6.95□□□□□ -1.3
ZNF540-210ENST00000592533 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
ZNF540-210ENST00000592533 C1orf195Q5TG92 126 aa6.95□□□□□ -1.3
ZNF540-210ENST00000592533 RTL8CO15255 209 aa6.94□□□□□ -1.3
ZNF540-210ENST00000592533 DNAH17Q9UFH2 4485 aa6.94□□□□□ -1.3
ZNF540-210ENST00000592533 ZNF861PO60384 105 aa6.94□□□□□ -1.3
ZNF540-210ENST00000592533 Q8N9P0 234 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-210ENST00000592533 DNAH8Q96JB1 4490 aa6.92□□□□□ -1.3
ZNF540-210ENST00000592533 PSPHP1O15172 72 aa6.92□□□□□ -1.3
ZNF540-210ENST00000592533 LIMD2Q9BT23 127 aa6.92□□□□□ -1.3
ZNF540-210ENST00000592533 CD164Q04900 197 aa6.9□□□□□ -1.31
ZNF540-210ENST00000592533 Q5VV11 94 aa6.9□□□□□ -1.31
ZNF540-210ENST00000592533 MRPL34Q9BQ48 92 aaKnown RBP6.9□□□□□ -1.31
ZNF540-210ENST00000592533 A8MUN3 132 aa6.89□□□□□ -1.31
ZNF540-210ENST00000592533 IGHV6-1A0A0B4J1U7 121 aa6.89□□□□□ -1.31
ZNF540-210ENST00000592533 COA5Q86WW8 74 aa6.89□□□□□ -1.31
ZNF540-210ENST00000592533 DNAH2Q9P225 4427 aa6.88□□□□□ -1.31
ZNF540-210ENST00000592533 CDK2AP2O75956 126 aa6.87□□□□□ -1.31
ZNF540-210ENST00000592533 FRAS1Q86XX4 4008 aa6.87□□□□□ -1.31
ZNF540-210ENST00000592533 FBN3Q75N90 2809 aa6.87□□□□□ -1.31
ZNF540-210ENST00000592533 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
ZNF540-210ENST00000592533 LOC101927531A0A1B0GV80 90 aa6.85□□□□□ -1.31
ZNF540-210ENST00000592533 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms