RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 LST1O00453 97 aa9.89□□□□□ -0.83
PRKCSH-216ENST00000592445 KRTAP10-10P60014 251 aa9.89□□□□□ -0.83
PRKCSH-216ENST00000592445 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
PRKCSH-216ENST00000592445 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
PRKCSH-216ENST00000592445 SMIM11BQ8TCY0 68 aa9.88□□□□□ -0.83
PRKCSH-216ENST00000592445 C20orf166-AS1Q96NR2 134 aa9.88□□□□□ -0.83
PRKCSH-216ENST00000592445 KRTAP9-3Q9BYQ3 159 aa9.88□□□□□ -0.83
PRKCSH-216ENST00000592445 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
PRKCSH-216ENST00000592445 IFITM1P13164 125 aa9.87□□□□□ -0.83
PRKCSH-216ENST00000592445 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
PRKCSH-216ENST00000592445 VAMP3Q15836 100 aa9.85□□□□□ -0.83
PRKCSH-216ENST00000592445 OCIAD2Q56VL3 154 aa9.85□□□□□ -0.83
PRKCSH-216ENST00000592445 LINC00846Q9NV44 126 aa9.85□□□□□ -0.83
PRKCSH-216ENST00000592445 A8MUU9 505 aa9.84□□□□□ -0.83
PRKCSH-216ENST00000592445 Q6ZQY7 126 aa9.84□□□□□ -0.83
PRKCSH-216ENST00000592445 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
PRKCSH-216ENST00000592445 PET117Q6UWS5 81 aa9.81□□□□□ -0.84
PRKCSH-216ENST00000592445 LINC00575Q6W349 94 aa9.81□□□□□ -0.84
PRKCSH-216ENST00000592445 Q6ZVH6 145 aa9.81□□□□□ -0.84
PRKCSH-216ENST00000592445 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
PRKCSH-216ENST00000592445 SS18L2Q9UHA2 77 aa9.76□□□□□ -0.85
PRKCSH-216ENST00000592445 RBM12B-AS1Q9P1G2 102 aa9.75□□□□□ -0.85
PRKCSH-216ENST00000592445 H3BUT2 72 aa9.74□□□□□ -0.85
PRKCSH-216ENST00000592445 SNHG12Q9BXW3 62 aa9.74□□□□□ -0.85
PRKCSH-216ENST00000592445 DSCR10P59022 87 aa9.71□□□□□ -0.86
PRKCSH-216ENST00000592445 ANKRD39Q53RE8 183 aa9.71□□□□□ -0.86
PRKCSH-216ENST00000592445 COLCA2A8K830 154 aa9.7□□□□□ -0.86
PRKCSH-216ENST00000592445 SCGB1D1O95968 90 aa9.7□□□□□ -0.86
PRKCSH-216ENST00000592445 C3orf79P0CE67 100 aa9.7□□□□□ -0.86
PRKCSH-216ENST00000592445 KRTAP19-6Q3LI70 58 aa9.7□□□□□ -0.86
PRKCSH-216ENST00000592445 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
PRKCSH-216ENST00000592445 KRTAP16-1A8MUX0 517 aa9.69□□□□□ -0.86
PRKCSH-216ENST00000592445 PPDPFLQ8WWR9 84 aa9.69□□□□□ -0.86
PRKCSH-216ENST00000592445 KRTDAPP60985 99 aa9.68□□□□□ -0.86
PRKCSH-216ENST00000592445 MPLKIPQ8TAP9 179 aa9.66□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BKO60814 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BJP06899 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HRES1P13985 223 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BOP23527 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BBP33778 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BDP58876 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BCP62807 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST2H2BEQ16778 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BHQ93079 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BNQ99877 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 HIST1H2BMQ99879 126 aa9.65□□□□□ -0.86
PRKCSH-216ENST00000592445 KRTAP6-3Q3LI67 103 aa9.63□□□□□ -0.87
PRKCSH-216ENST00000592445 TEN1Q86WV5 123 aa9.63□□□□□ -0.87
PRKCSH-216ENST00000592445 ATOH7Q8N100 152 aa9.63□□□□□ -0.87
PRKCSH-216ENST00000592445 A0A087WSZ3 146 aa9.62□□□□□ -0.87
PRKCSH-216ENST00000592445 SIGMAR1Q99720 223 aa9.61□□□□□ -0.87
PRKCSH-216ENST00000592445 LINC00313P59037 77 aa9.59□□□□□ -0.87
PRKCSH-216ENST00000592445 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
PRKCSH-216ENST00000592445 C12orf57Q99622 126 aa9.57□□□□□ -0.88
PRKCSH-216ENST00000592445 NOTCH2NLQ7Z3S9 236 aa9.56□□□□□ -0.88
PRKCSH-216ENST00000592445 MTURNQ8N3F0 131 aa9.56□□□□□ -0.88
PRKCSH-216ENST00000592445 NDUFV3P56181 108 aaKnown RBP9.52□□□□□ -0.89
PRKCSH-216ENST00000592445 IGKV4-1P06312 121 aa9.5□□□□□ -0.89
PRKCSH-216ENST00000592445 SNCGO76070 127 aa9.49□□□□□ -0.89
PRKCSH-216ENST00000592445 SNRPEP62304 92 aaKnown RBP9.48□□□□□ -0.89
PRKCSH-216ENST00000592445 H3BMG7 143 aa9.47□□□□□ -0.89
PRKCSH-216ENST00000592445 NEBP20929 6669 aa9.47□□□□□ -0.89
PRKCSH-216ENST00000592445 A8MWP4 228 aa9.44□□□□□ -0.9
PRKCSH-216ENST00000592445 COA6Q5JTJ3 125 aaKnown RBP9.44□□□□□ -0.9
PRKCSH-216ENST00000592445 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
PRKCSH-216ENST00000592445 Q8N9P0 234 aaPredicted RBP9.42□□□□□ -0.9
PRKCSH-216ENST00000592445 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
PRKCSH-216ENST00000592445 FABP2P12104 132 aa9.4□□□□□ -0.9
PRKCSH-216ENST00000592445 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.9
PRKCSH-216ENST00000592445 HIST1H4GQ99525 98 aa9.39□□□□□ -0.91
PRKCSH-216ENST00000592445 HSBP1L1C9JCN9 74 aa9.38□□□□□ -0.91
PRKCSH-216ENST00000592445 H0YGX0 51 aa9.38□□□□□ -0.91
PRKCSH-216ENST00000592445 FAM218AQ96MZ4 157 aa9.38□□□□□ -0.91
PRKCSH-216ENST00000592445 GHRHP01286 108 aa9.37□□□□□ -0.91
PRKCSH-216ENST00000592445 SPINK7P58062 85 aa9.36□□□□□ -0.91
PRKCSH-216ENST00000592445 MUC12Q9UKN1 5478 aa9.35□□□□□ -0.91
PRKCSH-216ENST00000592445 TRBV7-4A0A0J9YYF1 115 aa9.33□□□□□ -0.92
PRKCSH-216ENST00000592445 ANKRD29Q8N6D5 301 aa9.33□□□□□ -0.92
PRKCSH-216ENST00000592445 ZCCHC13Q8WW36 166 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-216ENST00000592445 RAB37Q96AX2 223 aa9.33□□□□□ -0.92
PRKCSH-216ENST00000592445 LINC00472Q9H8W2 130 aa9.32□□□□□ -0.92
PRKCSH-216ENST00000592445 A0A1B0GV72 72 aa9.29□□□□□ -0.92
PRKCSH-216ENST00000592445 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
PRKCSH-216ENST00000592445 WFDC13Q8IUB5 93 aa9.27□□□□□ -0.93
PRKCSH-216ENST00000592445 A0A1B0GX51 115 aa9.26□□□□□ -0.93
PRKCSH-216ENST00000592445 A0A1B0GVX0 72 aa9.25□□□□□ -0.93
PRKCSH-216ENST00000592445 TRACP01848 142 aa9.24□□□□□ -0.93
PRKCSH-216ENST00000592445 CCKP06307 115 aa9.23□□□□□ -0.93
PRKCSH-216ENST00000592445 KRTAP20-1Q3LI63 56 aa9.22□□□□□ -0.93
PRKCSH-216ENST00000592445 A0A0B4J2C4 111 aa9.21□□□□□ -0.94
PRKCSH-216ENST00000592445 COX8AP10176 69 aa9.17□□□□□ -0.94
PRKCSH-216ENST00000592445 S100A2P29034 98 aa9.17□□□□□ -0.94
PRKCSH-216ENST00000592445 LYRM7Q5U5X0 104 aa9.17□□□□□ -0.94
PRKCSH-216ENST00000592445 DNAL4O96015 105 aa9.16□□□□□ -0.94
PRKCSH-216ENST00000592445 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
PRKCSH-216ENST00000592445 ORMDL1Q9P0S3 153 aa9.16□□□□□ -0.94
PRKCSH-216ENST00000592445 HIST3H2BBQ8N257 126 aa9.14□□□□□ -0.95
PRKCSH-216ENST00000592445 H3BQ85 93 aa9.13□□□□□ -0.95
PRKCSH-216ENST00000592445 VPS25Q9BRG1 176 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms