RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PLECQ15149 4684 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-209ENST00000589838 PANO1I0J062 215 aa11.87□□□□□ -0.51
PRKCSH-209ENST00000589838 DSCR10P59022 87 aa11.86□□□□□ -0.51
PRKCSH-209ENST00000589838 NDUFC1O43677 76 aa11.85□□□□□ -0.51
PRKCSH-209ENST00000589838 OCR1Q9BZK8 76 aa11.85□□□□□ -0.51
PRKCSH-209ENST00000589838 Q6ZR54 194 aa11.85□□□□□ -0.51
PRKCSH-209ENST00000589838 CSMD3Q7Z407 3707 aa11.84□□□□□ -0.51
PRKCSH-209ENST00000589838 KRTAP13-1Q8IUC0 172 aa11.84□□□□□ -0.51
PRKCSH-209ENST00000589838 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.84□□□□□ -0.51
PRKCSH-209ENST00000589838 H7BZZ5 65 aa11.83□□□□□ -0.52
PRKCSH-209ENST00000589838 A0A087WSZ3 146 aa11.83□□□□□ -0.52
PRKCSH-209ENST00000589838 A0A0G2JQZ4 141 aa11.83□□□□□ -0.52
PRKCSH-209ENST00000589838 SNURFQ9Y675 71 aa11.83□□□□□ -0.52
PRKCSH-209ENST00000589838 VPS13DQ5THJ4 4388 aa11.82□□□□□ -0.52
PRKCSH-209ENST00000589838 RTL8CO15255 209 aa11.82□□□□□ -0.52
PRKCSH-209ENST00000589838 TENM2Q9NT68 2774 aa11.82□□□□□ -0.52
PRKCSH-209ENST00000589838 DNAH7Q8WXX0 4024 aa11.81□□□□□ -0.52
PRKCSH-209ENST00000589838 TMEM254Q8TBM7 123 aa11.8□□□□□ -0.52
PRKCSH-209ENST00000589838 FAM236DA0A1B0GTK5 79 aa11.8□□□□□ -0.52
PRKCSH-209ENST00000589838 K7EQZ3 153 aa11.8□□□□□ -0.52
PRKCSH-209ENST00000589838 FAM236CP0DP71 79 aa11.8□□□□□ -0.52
PRKCSH-209ENST00000589838 C1orf134Q5TEV5 83 aa11.76□□□□□ -0.53
PRKCSH-209ENST00000589838 DNHD1Q96M86 4753 aa11.76□□□□□ -0.53
PRKCSH-209ENST00000589838 HCG22E2RYF7 251 aa11.75□□□□□ -0.53
PRKCSH-209ENST00000589838 ZNF706Q9Y5V0 76 aaPredicted RBP11.74□□□□□ -0.53
PRKCSH-209ENST00000589838 PLAC8Q9NZF1 115 aa11.74□□□□□ -0.53
PRKCSH-209ENST00000589838 A0A0U1RQV1 116 aa11.73□□□□□ -0.53
PRKCSH-209ENST00000589838 FAM30AQ9NZY2 134 aa11.73□□□□□ -0.53
PRKCSH-209ENST00000589838 STARD9Q9P2P6 4700 aa11.72□□□□□ -0.53
PRKCSH-209ENST00000589838 IGLV5-52A0A0A0MRZ9 124 aa11.72□□□□□ -0.53
PRKCSH-209ENST00000589838 ATP5EP56381 51 aaPredicted RBP11.72□□□□□ -0.53
PRKCSH-209ENST00000589838 RPL37AP61513 92 aaKnown RBP11.71□□□□□ -0.53
PRKCSH-209ENST00000589838 DEFB116Q30KQ4 102 aa11.7□□□□□ -0.54
PRKCSH-209ENST00000589838 LINC00483Q53H64 154 aa11.7□□□□□ -0.54
PRKCSH-209ENST00000589838 LCE6AA0A183 80 aa11.68□□□□□ -0.54
PRKCSH-209ENST00000589838 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
PRKCSH-209ENST00000589838 SERP1Q9Y6X1 66 aa11.68□□□□□ -0.54
PRKCSH-209ENST00000589838 LINC00472Q9H8W2 130 aa11.67□□□□□ -0.54
PRKCSH-209ENST00000589838 PRKDCP78527 4128 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-209ENST00000589838 LY6G6CO95867 125 aa11.66□□□□□ -0.54
PRKCSH-209ENST00000589838 C5orf47Q569G3 176 aa11.65□□□□□ -0.54
PRKCSH-209ENST00000589838 IGLV9-49A0A0B4J1Y8 123 aa11.64□□□□□ -0.55
PRKCSH-209ENST00000589838 A8MWP4 228 aa11.64□□□□□ -0.55
PRKCSH-209ENST00000589838 ZNF861PO60384 105 aa11.64□□□□□ -0.55
PRKCSH-209ENST00000589838 PRR15Q8IV56 129 aa11.63□□□□□ -0.55
PRKCSH-209ENST00000589838 OXTP01178 125 aa11.61□□□□□ -0.55
PRKCSH-209ENST00000589838 WFDC13Q8IUB5 93 aa11.61□□□□□ -0.55
PRKCSH-209ENST00000589838 DNAH17Q9UFH2 4485 aa11.59□□□□□ -0.55
PRKCSH-209ENST00000589838 MEGF8Q7Z7M0 2845 aa11.59□□□□□ -0.55
PRKCSH-209ENST00000589838 KRTAP29-1A8MX34 341 aaPredicted RBP11.58□□□□□ -0.56
PRKCSH-209ENST00000589838 CASC2Q6XLA1 102 aa11.58□□□□□ -0.56
PRKCSH-209ENST00000589838 NDUFB1O75438 58 aa11.57□□□□□ -0.56
PRKCSH-209ENST00000589838 WWC2-AS2Q96NR7 200 aa11.57□□□□□ -0.56
PRKCSH-209ENST00000589838 SRRM2Q9UQ35 2752 aaKnown RBP11.55□□□□□ -0.56
PRKCSH-209ENST00000589838 ZCCHC13Q8WW36 166 aaKnown RBP11.54□□□□□ -0.56
PRKCSH-209ENST00000589838 HECTD4Q9Y4D8 3996 aa11.54□□□□□ -0.56
PRKCSH-209ENST00000589838 IGLV7-43P04211 117 aa11.53□□□□□ -0.56
PRKCSH-209ENST00000589838 MP68P56378 58 aa11.53□□□□□ -0.56
PRKCSH-209ENST00000589838 MOBPQ13875 183 aa11.53□□□□□ -0.56
PRKCSH-209ENST00000589838 DNAH2Q9P225 4427 aa11.49□□□□□ -0.57
PRKCSH-209ENST00000589838 HRCT1Q6UXD1 115 aa11.49□□□□□ -0.57
PRKCSH-209ENST00000589838 Q96NJ1 140 aa11.49□□□□□ -0.57
PRKCSH-209ENST00000589838 DNAH6Q9C0G6 4158 aa11.48□□□□□ -0.57
PRKCSH-209ENST00000589838 H3BPC8 53 aa11.47□□□□□ -0.57
PRKCSH-209ENST00000589838 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
PRKCSH-209ENST00000589838 SMIM26A0A096LP01 95 aa11.46□□□□□ -0.57
PRKCSH-209ENST00000589838 MMP24-AS1A0A0U1RRL7 71 aa11.46□□□□□ -0.58
PRKCSH-209ENST00000589838 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
PRKCSH-209ENST00000589838 hDV103S1A0JD37 113 aa11.44□□□□□ -0.58
PRKCSH-209ENST00000589838 CDK2AP2O75956 126 aa11.44□□□□□ -0.58
PRKCSH-209ENST00000589838 KRTAP10-2P60368 255 aa11.43□□□□□ -0.58
PRKCSH-209ENST00000589838 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
PRKCSH-209ENST00000589838 Q5XG85 94 aa11.42□□□□□ -0.58
PRKCSH-209ENST00000589838 H0Y9P7 68 aa11.42□□□□□ -0.58
PRKCSH-209ENST00000589838 SVIPQ8NHG7 77 aa11.41□□□□□ -0.58
PRKCSH-209ENST00000589838 LINC00208Q96KT6 92 aa11.4□□□□□ -0.59
PRKCSH-209ENST00000589838 FBN3Q75N90 2809 aa11.39□□□□□ -0.59
PRKCSH-209ENST00000589838 CD164Q04900 197 aa11.39□□□□□ -0.59
PRKCSH-209ENST00000589838 SSBP3-AS1Q7Z2R9 100 aa11.39□□□□□ -0.59
PRKCSH-209ENST00000589838 C8orf17Q9NRJ1 99 aa11.39□□□□□ -0.59
PRKCSH-209ENST00000589838 DNAH8Q96JB1 4490 aa11.39□□□□□ -0.59
PRKCSH-209ENST00000589838 TGP01266 2768 aa11.39□□□□□ -0.59
PRKCSH-209ENST00000589838 A0A1B0GVX0 72 aa11.38□□□□□ -0.59
PRKCSH-209ENST00000589838 TRAV22A0A0B4J277 110 aa11.38□□□□□ -0.59
PRKCSH-209ENST00000589838 ASB16-AS1Q495Z4 193 aa11.38□□□□□ -0.59
PRKCSH-209ENST00000589838 TP53AIP1Q9HCN2 124 aa11.38□□□□□ -0.59
PRKCSH-209ENST00000589838 Q6ZSA8 131 aa11.36□□□□□ -0.59
PRKCSH-209ENST00000589838 C4orf26Q17RF5 130 aa11.35□□□□□ -0.59
PRKCSH-209ENST00000589838 ALMS1Q8TCU4 4167 aa11.34□□□□□ -0.59
PRKCSH-209ENST00000589838 IGHV6-1A0A0B4J1U7 121 aa11.34□□□□□ -0.59
PRKCSH-209ENST00000589838 CYP4F30PQ9H0H9 118 aa11.34□□□□□ -0.59
PRKCSH-209ENST00000589838 KRTAP10-1P60331 282 aa11.32□□□□□ -0.6
PRKCSH-209ENST00000589838 C1orf64Q8NEQ6 169 aa11.32□□□□□ -0.6
PRKCSH-209ENST00000589838 FP248Q71RG6 208 aaPredicted RBP11.3□□□□□ -0.6
PRKCSH-209ENST00000589838 SPANXA2-OT1Q8N9U9 137 aa11.29□□□□□ -0.6
PRKCSH-209ENST00000589838 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.6
PRKCSH-209ENST00000589838 FAM229BQ4G0N7 80 aa11.26□□□□□ -0.61
PRKCSH-209ENST00000589838 NDUFS5O43920 106 aa11.24□□□□□ -0.61
PRKCSH-209ENST00000589838 DNAH11Q96DT5 4516 aa11.24□□□□□ -0.61
PRKCSH-209ENST00000589838 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms