RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	SCX	Q7RTU7	201 aa		9.84	□□□□□ -0.83
DDX39A-209	ENST00000589318	LCE6A	A0A183	80 aa		9.83	□□□□□ -0.84
DDX39A-209	ENST00000589318	FAM168B	A1KXE4	195 aa		9.83	□□□□□ -0.84
DDX39A-209	ENST00000589318	C3orf84	H3BNL1	204 aa		9.82	□□□□□ -0.84
DDX39A-209	ENST00000589318	ELOF1	P60002	83 aa	Known RBP	9.82	□□□□□ -0.84
DDX39A-209	ENST00000589318	IGLV5-37	A0A075B6J1	123 aa		9.81	□□□□□ -0.84
DDX39A-209	ENST00000589318		A0A096LNI7	61 aa		9.81	□□□□□ -0.84
DDX39A-209	ENST00000589318	DNAH17	Q9UFH2	4485 aa		9.81	□□□□□ -0.84
DDX39A-209	ENST00000589318	HECTD4	Q9Y4D8	3996 aa		9.8	□□□□□ -0.84
DDX39A-209	ENST00000589318		A0A087WTM6	91 aa		9.8	□□□□□ -0.84
DDX39A-209	ENST00000589318	C16orf90	A8MZG2	172 aa		9.8	□□□□□ -0.84
DDX39A-209	ENST00000589318	ZNF73	O43830	326 aa	Predicted RBP	9.8	□□□□□ -0.84
DDX39A-209	ENST00000589318	C9orf163	Q8N9P6	203 aa		9.8	□□□□□ -0.84
DDX39A-209	ENST00000589318	C7orf33	Q8WU49	177 aa		9.79	□□□□□ -0.84
DDX39A-209	ENST00000589318	HYDIN	Q4G0P3	5121 aa		9.78	□□□□□ -0.84
DDX39A-209	ENST00000589318	NKAPP1	Q8N9T2	125 aa		9.78	□□□□□ -0.84
DDX39A-209	ENST00000589318	HIGD2A	Q9BW72	106 aa		9.78	□□□□□ -0.84
DDX39A-209	ENST00000589318	FRAS1	Q86XX4	4008 aa		9.77	□□□□□ -0.85
DDX39A-209	ENST00000589318	C1orf134	Q5TEV5	83 aa		9.77	□□□□□ -0.85
DDX39A-209	ENST00000589318	IGKV2-24	A0A0C4DH68	120 aa		9.76	□□□□□ -0.85
DDX39A-209	ENST00000589318	CYP4F30P	Q9H0H9	118 aa		9.76	□□□□□ -0.85
DDX39A-209	ENST00000589318	KCNQ1DN	Q9H478	68 aa		9.75	□□□□□ -0.85
DDX39A-209	ENST00000589318		A0A1W2PNN7	141 aa		9.74	□□□□□ -0.85
DDX39A-209	ENST00000589318	CHTF8	P0CG12	524 aa		9.74	□□□□□ -0.85
DDX39A-209	ENST00000589318	IGLV1-50	A0A075B6I6	118 aa		9.73	□□□□□ -0.85
DDX39A-209	ENST00000589318	CD164	Q04900	197 aa		9.73	□□□□□ -0.85
DDX39A-209	ENST00000589318	MRPL55	Q7Z7F7	128 aa	Known RBP	9.72	□□□□□ -0.85
DDX39A-209	ENST00000589318	C1orf64	Q8NEQ6	169 aa		9.72	□□□□□ -0.85
DDX39A-209	ENST00000589318	ZCCHC13	Q8WW36	166 aa	Known RBP	9.72	□□□□□ -0.85
DDX39A-209	ENST00000589318	RPL37AP8	A6NKH3	93 aa		9.71	□□□□□ -0.86
DDX39A-209	ENST00000589318	NDUFB1	O75438	58 aa		9.71	□□□□□ -0.86
DDX39A-209	ENST00000589318	PANO1	I0J062	215 aa		9.7	□□□□□ -0.86
DDX39A-209	ENST00000589318	LINC00528	Q8N1L1	170 aa		9.7	□□□□□ -0.86
DDX39A-209	ENST00000589318		Q8N9L7	120 aa		9.7	□□□□□ -0.86
DDX39A-209	ENST00000589318	DNAH11	Q96DT5	4516 aa		9.7	□□□□□ -0.86
DDX39A-209	ENST00000589318	SACS	Q9NZJ4	4579 aa		9.69	□□□□□ -0.86
DDX39A-209	ENST00000589318	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	9.68	□□□□□ -0.86
DDX39A-209	ENST00000589318	SPRR1A	P35321	89 aa		9.68	□□□□□ -0.86
DDX39A-209	ENST00000589318	TNP2	Q05952	138 aa		9.68	□□□□□ -0.86
DDX39A-209	ENST00000589318	ETDC	A0A1B0GVM5	59 aa		9.68	□□□□□ -0.86
DDX39A-209	ENST00000589318	RTL8C	O15255	209 aa		9.68	□□□□□ -0.86
DDX39A-209	ENST00000589318	FAT2	Q9NYQ8	4349 aa		9.67	□□□□□ -0.86
DDX39A-209	ENST00000589318	IGLV5-48	A0A075B6I7	105 aa		9.66	□□□□□ -0.86
DDX39A-209	ENST00000589318	SMIM29	Q86T20	159 aa		9.66	□□□□□ -0.86
DDX39A-209	ENST00000589318	TRAV22	A0A0B4J277	110 aa		9.66	□□□□□ -0.86
DDX39A-209	ENST00000589318	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	9.66	□□□□□ -0.86
DDX39A-209	ENST00000589318	FAM30A	Q9NZY2	134 aa		9.65	□□□□□ -0.86
DDX39A-209	ENST00000589318	SPACA4	Q8TDM5	124 aa		9.64	□□□□□ -0.87
DDX39A-209	ENST00000589318	UBE2B	P63146	152 aa		9.64	□□□□□ -0.87
DDX39A-209	ENST00000589318	DNAH5	Q8TE73	4624 aa		9.63	□□□□□ -0.87
DDX39A-209	ENST00000589318		Q6ZRX8	168 aa		9.62	□□□□□ -0.87
DDX39A-209	ENST00000589318	PHF5A	Q7RTV0	110 aa	Known RBP	9.62	□□□□□ -0.87
DDX39A-209	ENST00000589318	KRTAP11-1	Q8IUC1	163 aa		9.62	□□□□□ -0.87
DDX39A-209	ENST00000589318	PKD1	P98161	4303 aa		9.62	□□□□□ -0.87
DDX39A-209	ENST00000589318	IGLV5-52	A0A0A0MRZ9	124 aa		9.61	□□□□□ -0.87
DDX39A-209	ENST00000589318	REG3G	Q6UW15	175 aa		9.61	□□□□□ -0.87
DDX39A-209	ENST00000589318		Q9BRP9	147 aa		9.6	□□□□□ -0.87
DDX39A-209	ENST00000589318	DNAH8	Q96JB1	4490 aa		9.6	□□□□□ -0.87
DDX39A-209	ENST00000589318	UBE2A	P49459	152 aa		9.59	□□□□□ -0.87
DDX39A-209	ENST00000589318	PSPHP1	O15172	72 aa		9.58	□□□□□ -0.88
DDX39A-209	ENST00000589318	KRTAP10-2	P60368	255 aa		9.58	□□□□□ -0.88
DDX39A-209	ENST00000589318	LIMD2	Q9BT23	127 aa		9.58	□□□□□ -0.88
DDX39A-209	ENST00000589318	SPANXA2-OT1	Q8N9U9	137 aa		9.56	□□□□□ -0.88
DDX39A-209	ENST00000589318	SPRR4	Q96PI1	79 aa		9.56	□□□□□ -0.88
DDX39A-209	ENST00000589318	DHRS4-AS1	Q9P1J3	65 aa		9.56	□□□□□ -0.88
DDX39A-209	ENST00000589318		H3BPC8	53 aa		9.54	□□□□□ -0.88
DDX39A-209	ENST00000589318	MP68	P56378	58 aa		9.54	□□□□□ -0.88
DDX39A-209	ENST00000589318		Q8NBF4	154 aa		9.54	□□□□□ -0.88
DDX39A-209	ENST00000589318	KTN1-AS1	Q86SY8	53 aa		9.54	□□□□□ -0.88
DDX39A-209	ENST00000589318		Q8N377	158 aa		9.54	□□□□□ -0.88
DDX39A-209	ENST00000589318	PLAC8	Q9NZF1	115 aa		9.53	□□□□□ -0.88
DDX39A-209	ENST00000589318	HCG22	E2RYF7	251 aa		9.52	□□□□□ -0.88
DDX39A-209	ENST00000589318	NDUFS5	O43920	106 aa		9.52	□□□□□ -0.89
DDX39A-209	ENST00000589318		Q5VV11	94 aa		9.52	□□□□□ -0.89
DDX39A-209	ENST00000589318		A0A1W2PNM2	257 aa		9.51	□□□□□ -0.89
DDX39A-209	ENST00000589318		A8MUN3	132 aa		9.51	□□□□□ -0.89
DDX39A-209	ENST00000589318	DSCR10	P59022	87 aa		9.51	□□□□□ -0.89
DDX39A-209	ENST00000589318	PRLH	P81277	87 aa		9.51	□□□□□ -0.89
DDX39A-209	ENST00000589318	C1orf137	Q5JT78	98 aa		9.5	□□□□□ -0.89
DDX39A-209	ENST00000589318	ATP11AUN	Q6ZP68	121 aa		9.5	□□□□□ -0.89
DDX39A-209	ENST00000589318	ST20-AS1	Q8NBB2	130 aa		9.5	□□□□□ -0.89
DDX39A-209	ENST00000589318		H0Y9J4	135 aa		9.48	□□□□□ -0.89
DDX39A-209	ENST00000589318	RYR2	Q92736	4967 aa		9.47	□□□□□ -0.89
DDX39A-209	ENST00000589318	KMT2C	Q8NEZ4	4911 aa	Known RBP	9.47	□□□□□ -0.89
DDX39A-209	ENST00000589318	KRTAP13-1	Q8IUC0	172 aa		9.46	□□□□□ -0.89
DDX39A-209	ENST00000589318	DEFB105A	Q8NG35	78 aa		9.46	□□□□□ -0.89
DDX39A-209	ENST00000589318		K7EQZ3	153 aa		9.46	□□□□□ -0.9
DDX39A-209	ENST00000589318	LINC00208	Q96KT6	92 aa		9.46	□□□□□ -0.9
DDX39A-209	ENST00000589318	SRRM2	Q9UQ35	2752 aa	Known RBP	9.46	□□□□□ -0.9
DDX39A-209	ENST00000589318	KRTAP10-1	P60331	282 aa		9.45	□□□□□ -0.9
DDX39A-209	ENST00000589318		Q6ZSA8	131 aa		9.45	□□□□□ -0.9
DDX39A-209	ENST00000589318		Q8N9P0	234 aa	Predicted RBP	9.45	□□□□□ -0.9
DDX39A-209	ENST00000589318	CHKB-CPT1B	H3BT56	60 aa		9.44	□□□□□ -0.9
DDX39A-209	ENST00000589318		Q75L30	129 aa		9.44	□□□□□ -0.9
DDX39A-209	ENST00000589318	PSORS1C2	Q9UIG4	136 aa		9.43	□□□□□ -0.9
DDX39A-209	ENST00000589318	PKHD1	P08F94	4074 aa		9.42	□□□□□ -0.9
DDX39A-209	ENST00000589318	CIRBP-AS1	Q8TBR5	109 aa		9.42	□□□□□ -0.9
DDX39A-209	ENST00000589318	LOC101927531	A0A1B0GV80	90 aa		9.41	□□□□□ -0.9
DDX39A-209	ENST00000589318	PRR4	Q16378	134 aa		9.39	□□□□□ -0.91
DDX39A-209	ENST00000589318	RBM12B-AS1	Q9P1G2	102 aa		9.39	□□□□□ -0.91

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