RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 C3orf22Q8N5N4 141 aa18.7■□□□□ 0.58
CAPNS1-206ENST00000588815 FAM229AH3BQW9 127 aa18.68■□□□□ 0.58
CAPNS1-206ENST00000588815 J3QR89 54 aa18.67■□□□□ 0.58
CAPNS1-206ENST00000588815 PLA2G1BP04054 148 aaKnown RBP18.67■□□□□ 0.58
CAPNS1-206ENST00000588815 PDE6GP18545 87 aa18.67■□□□□ 0.58
CAPNS1-206ENST00000588815 C21orf62-AS1Q17RA5 79 aa18.67■□□□□ 0.58
CAPNS1-206ENST00000588815 DSCR8Q96T75 97 aa18.67■□□□□ 0.58
CAPNS1-206ENST00000588815 C14orf132Q9NPU4 83 aa18.66■□□□□ 0.58
CAPNS1-206ENST00000588815 KRTAP10-4P60372 401 aaPredicted RBP18.65■□□□□ 0.58
CAPNS1-206ENST00000588815 LOC110117498A0A087WWA1 95 aa18.64■□□□□ 0.57
CAPNS1-206ENST00000588815 A0A1B0GV72 72 aa18.64■□□□□ 0.57
CAPNS1-206ENST00000588815 IGLV8-61A0A075B6I0 122 aa18.63■□□□□ 0.57
CAPNS1-206ENST00000588815 TRBV7-4A0A0J9YYF1 115 aa18.63■□□□□ 0.57
CAPNS1-206ENST00000588815 K7ERU9 68 aa18.6■□□□□ 0.57
CAPNS1-206ENST00000588815 FAM229BQ4G0N7 80 aa18.56■□□□□ 0.56
CAPNS1-206ENST00000588815 Q6ZQT0 140 aa18.56■□□□□ 0.56
CAPNS1-206ENST00000588815 Q6JHZ5 121 aa18.55■□□□□ 0.56
CAPNS1-206ENST00000588815 CCKP06307 115 aa18.53■□□□□ 0.56
CAPNS1-206ENST00000588815 Q5VSD8 79 aa18.52■□□□□ 0.55
CAPNS1-206ENST00000588815 EPPK1P58107 5090 aaKnown RBP18.49■□□□□ 0.55
CAPNS1-206ENST00000588815 KRTAP1-4P0C5Y4 121 aa18.49■□□□□ 0.55
CAPNS1-206ENST00000588815 ANAPC11Q9NYG5 84 aa18.49■□□□□ 0.55
CAPNS1-206ENST00000588815 HSPG2P98160 4391 aa18.49■□□□□ 0.55
CAPNS1-206ENST00000588815 FAM240AA0A1B0GVK7 77 aa18.48■□□□□ 0.55
CAPNS1-206ENST00000588815 IGLV9-49A0A0B4J1Y8 123 aa18.47■□□□□ 0.55
CAPNS1-206ENST00000588815 Q8NBF4 154 aa18.47■□□□□ 0.55
CAPNS1-206ENST00000588815 FAT1Q14517 4588 aa18.47■□□□□ 0.55
CAPNS1-206ENST00000588815 ACYP1P07311 99 aa18.46■□□□□ 0.55
CAPNS1-206ENST00000588815 C9orf153Q5TBE3 101 aa18.46■□□□□ 0.55
CAPNS1-206ENST00000588815 IGFL1Q6UW32 110 aa18.46■□□□□ 0.54
CAPNS1-206ENST00000588815 Q8N1X5 172 aa18.44■□□□□ 0.54
CAPNS1-206ENST00000588815 RYR1P21817 5038 aa18.44■□□□□ 0.54
CAPNS1-206ENST00000588815 A0A1B0GW54 56 aa18.42■□□□□ 0.54
CAPNS1-206ENST00000588815 CRYGAP11844 174 aa18.42■□□□□ 0.54
CAPNS1-206ENST00000588815 MOBPQ13875 183 aa18.4■□□□□ 0.54
CAPNS1-206ENST00000588815 SSBP3-AS1Q7Z2R9 100 aa18.39■□□□□ 0.54
CAPNS1-206ENST00000588815 VPS25Q9BRG1 176 aa18.39■□□□□ 0.53
CAPNS1-206ENST00000588815 A0A087X002 238 aa18.36■□□□□ 0.53
CAPNS1-206ENST00000588815 A0A1W2PNM2 257 aa18.36■□□□□ 0.53
CAPNS1-206ENST00000588815 Q6Q795 121 aa18.35■□□□□ 0.53
CAPNS1-206ENST00000588815 KRTAP13-2Q52LG2 175 aa18.31■□□□□ 0.52
CAPNS1-206ENST00000588815 KIAA1109Q2LD37 5005 aa18.31■□□□□ 0.52
CAPNS1-206ENST00000588815 PKHD1L1Q86WI1 4243 aa18.27■□□□□ 0.51
CAPNS1-206ENST00000588815 A0A0G2JQZ4 141 aa18.26■□□□□ 0.51
CAPNS1-206ENST00000588815 CD164Q04900 197 aa18.24■□□□□ 0.51
CAPNS1-206ENST00000588815 KRTAP17-1Q9BYP8 105 aa18.24■□□□□ 0.51
CAPNS1-206ENST00000588815 LINC00846Q9NV44 126 aa18.24■□□□□ 0.51
CAPNS1-206ENST00000588815 TYMSOSQ8TAI1 123 aa18.22■□□□□ 0.51
CAPNS1-206ENST00000588815 UBL5Q9BZL1 73 aa18.19■□□□□ 0.5
CAPNS1-206ENST00000588815 PRR26Q8N8Z3 221 aa18.18■□□□□ 0.5
CAPNS1-206ENST00000588815 TRBV7-7A0A0K0K1E9 115 aa18.17■□□□□ 0.5
CAPNS1-206ENST00000588815 CDIP1Q9H305 208 aa18.16■□□□□ 0.5
CAPNS1-206ENST00000588815 A0A087WSZ3 146 aa18.14■□□□□ 0.49
CAPNS1-206ENST00000588815 NREPQ16612 68 aa18.09■□□□□ 0.49
CAPNS1-206ENST00000588815 SS18L2Q9UHA2 77 aa18.09■□□□□ 0.49
CAPNS1-206ENST00000588815 HRCT1Q6UXD1 115 aa18.08■□□□□ 0.49
CAPNS1-206ENST00000588815 Q6ZVQ6 151 aa18.08■□□□□ 0.49
CAPNS1-206ENST00000588815 LINC00643Q86TS7 51 aa18.07■□□□□ 0.48
CAPNS1-206ENST00000588815 C4orf48Q5BLP8 95 aa18.06■□□□□ 0.48
CAPNS1-206ENST00000588815 SPAG11AQ6PDA7 123 aa18.04■□□□□ 0.48
CAPNS1-206ENST00000588815 LINC00304Q8N9R0 145 aa18.01■□□□□ 0.47
CAPNS1-206ENST00000588815 BIRC6Q9NR09 4857 aa18.01■□□□□ 0.47
CAPNS1-206ENST00000588815 SPINK1P00995 79 aa18.01■□□□□ 0.47
CAPNS1-206ENST00000588815 ATP5EP2Q5VTU8 51 aa17.99■□□□□ 0.47
CAPNS1-206ENST00000588815 Q5XG85 94 aa17.99■□□□□ 0.47
CAPNS1-206ENST00000588815 RPS29P62273 56 aaKnown RBP17.97■□□□□ 0.47
CAPNS1-206ENST00000588815 LIMD2Q9BT23 127 aa17.96■□□□□ 0.47
CAPNS1-206ENST00000588815 KRTAP10-8P60410 259 aa17.95■□□□□ 0.46
CAPNS1-206ENST00000588815 ASB16-AS1Q495Z4 193 aa17.94■□□□□ 0.46
CAPNS1-206ENST00000588815 CXCL6P80162 114 aa17.91■□□□□ 0.46
CAPNS1-206ENST00000588815 LINC00472Q9H8W2 130 aa17.89■□□□□ 0.45
CAPNS1-206ENST00000588815 FLG2Q5D862 2391 aaPredicted RBP17.89■□□□□ 0.45
CAPNS1-206ENST00000588815 BPY2O14599 106 aa17.88■□□□□ 0.45
CAPNS1-206ENST00000588815 OXTP01178 125 aa17.88■□□□□ 0.45
CAPNS1-206ENST00000588815 KRTAP4-5Q9BYR2 181 aa17.88■□□□□ 0.45
CAPNS1-206ENST00000588815 SIGMAR1Q99720 223 aa17.86■□□□□ 0.45
CAPNS1-206ENST00000588815 J3KT08 172 aa17.84■□□□□ 0.45
CAPNS1-206ENST00000588815 MT-ATP8P03928 68 aa17.82■□□□□ 0.44
CAPNS1-206ENST00000588815 Q96NJ1 140 aa17.82■□□□□ 0.44
CAPNS1-206ENST00000588815 IGKV3D-7A0A0C4DH55 119 aa17.81■□□□□ 0.44
CAPNS1-206ENST00000588815 IMUPQ9GZP8 106 aa17.79■□□□□ 0.44
CAPNS1-206ENST00000588815 FAT3Q8TDW7 4589 aa17.77■□□□□ 0.44
CAPNS1-206ENST00000588815 LRP1Q07954 4544 aaKnown RBP17.77■□□□□ 0.43
CAPNS1-206ENST00000588815 MT1HL1P0DM35 61 aa17.73■□□□□ 0.43
CAPNS1-206ENST00000588815 DEFB116Q30KQ4 102 aa17.73■□□□□ 0.43
CAPNS1-206ENST00000588815 HERC2O95714 4834 aa17.72■□□□□ 0.43
CAPNS1-206ENST00000588815 KRTAP29-1A8MX34 341 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-206ENST00000588815 IGKV4-1P06312 121 aa17.72■□□□□ 0.43
CAPNS1-206ENST00000588815 DSCR10P59022 87 aa17.71■□□□□ 0.43
CAPNS1-206ENST00000588815 TNXBP22105 4242 aa17.7■□□□□ 0.42
CAPNS1-206ENST00000588815 C1orf195Q5TG92 126 aa17.69■□□□□ 0.42
CAPNS1-206ENST00000588815 A8MWP4 228 aa17.67■□□□□ 0.42
CAPNS1-206ENST00000588815 NDUFB1O75438 58 aa17.64■□□□□ 0.41
CAPNS1-206ENST00000588815 HIST1H4AP62805 103 aaKnown RBP17.64■□□□□ 0.41
CAPNS1-206ENST00000588815 K7EQZ3 153 aa17.6■□□□□ 0.41
CAPNS1-206ENST00000588815 MYCBP2O75592 4640 aa17.59■□□□□ 0.41
CAPNS1-206ENST00000588815 PRR15Q8IV56 129 aa17.58■□□□□ 0.41
CAPNS1-206ENST00000588815 Q8N9L7 120 aa17.57■□□□□ 0.4
CAPNS1-206ENST00000588815 DMBT1Q9UGM3 2413 aaPredicted RBP17.56■□□□□ 0.4
CAPNS1-206ENST00000588815 A0A1B0GVX0 72 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms