RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
CCDC43-204ENST00000588687 COPS9Q8WXC6 57 aa9.49□□□□□ -0.89
CCDC43-204ENST00000588687 OBSCN-AS1Q96MR7 158 aa9.49□□□□□ -0.89
CCDC43-204ENST00000588687 TRBV7-7A0A0K0K1E9 115 aa9.48□□□□□ -0.89
CCDC43-204ENST00000588687 FCGBPQ9Y6R7 5405 aaPredicted RBP9.47□□□□□ -0.89
CCDC43-204ENST00000588687 Q6Q795 121 aa9.47□□□□□ -0.89
CCDC43-204ENST00000588687 IGFL1Q6UW32 110 aa9.47□□□□□ -0.89
CCDC43-204ENST00000588687 CLEC2BQ92478 149 aa9.47□□□□□ -0.89
CCDC43-204ENST00000588687 PCP2Q8IVA1 136 aa9.46□□□□□ -0.9
CCDC43-204ENST00000588687 TRAV13-2A0A0B4J235 113 aa9.45□□□□□ -0.9
CCDC43-204ENST00000588687 F8WEM9 126 aa9.45□□□□□ -0.9
CCDC43-204ENST00000588687 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
CCDC43-204ENST00000588687 CFC1P0CG37 223 aa9.44□□□□□ -0.9
CCDC43-204ENST00000588687 Q6JHZ5 121 aa9.44□□□□□ -0.9
CCDC43-204ENST00000588687 LINC00575Q6W349 94 aa9.44□□□□□ -0.9
CCDC43-204ENST00000588687 Q6ZQY7 126 aa9.43□□□□□ -0.9
CCDC43-204ENST00000588687 KRTDAPP60985 99 aa9.42□□□□□ -0.9
CCDC43-204ENST00000588687 SLC7A5P1Q8MH63 180 aa9.42□□□□□ -0.9
CCDC43-204ENST00000588687 COA6Q5JTJ3 125 aaKnown RBP9.41□□□□□ -0.9
CCDC43-204ENST00000588687 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
CCDC43-204ENST00000588687 OCIAD2Q56VL3 154 aa9.38□□□□□ -0.91
CCDC43-204ENST00000588687 C20orf166-AS1Q96NR2 134 aa9.38□□□□□ -0.91
CCDC43-204ENST00000588687 hADV29S1A0JD25 119 aa9.37□□□□□ -0.91
CCDC43-204ENST00000588687 C20orf202A1L168 122 aa9.35□□□□□ -0.91
CCDC43-204ENST00000588687 A8MUU9 505 aa9.34□□□□□ -0.91
CCDC43-204ENST00000588687 MT2AP02795 61 aa9.34□□□□□ -0.91
CCDC43-204ENST00000588687 VAMP3Q15836 100 aa9.34□□□□□ -0.91
CCDC43-204ENST00000588687 Q96NJ1 140 aa9.34□□□□□ -0.91
CCDC43-204ENST00000588687 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
CCDC43-204ENST00000588687 H3BUT2 72 aa9.31□□□□□ -0.92
CCDC43-204ENST00000588687 LST1O00453 97 aa9.31□□□□□ -0.92
CCDC43-204ENST00000588687 PPDPFLQ8WWR9 84 aa9.3□□□□□ -0.92
CCDC43-204ENST00000588687 MACF1Q9UPN3 7388 aaKnown RBP9.27□□□□□ -0.93
CCDC43-204ENST00000588687 MT1FP04733 61 aa9.27□□□□□ -0.93
CCDC43-204ENST00000588687 KRTAP19-1Q8IUB9 90 aa9.26□□□□□ -0.93
CCDC43-204ENST00000588687 SYNE2Q8WXH0 6885 aaKnown RBP9.26□□□□□ -0.93
CCDC43-204ENST00000588687 KRTAP16-1A8MUX0 517 aa9.24□□□□□ -0.93
CCDC43-204ENST00000588687 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
CCDC43-204ENST00000588687 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
CCDC43-204ENST00000588687 SS18L2Q9UHA2 77 aa9.24□□□□□ -0.93
CCDC43-204ENST00000588687 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
CCDC43-204ENST00000588687 SCGB1D1O95968 90 aa9.23□□□□□ -0.93
CCDC43-204ENST00000588687 KRTAP9-3Q9BYQ3 159 aa9.23□□□□□ -0.93
CCDC43-204ENST00000588687 SNHG12Q9BXW3 62 aa9.22□□□□□ -0.93
CCDC43-204ENST00000588687 BVES-AS1Q5T3Y7 98 aa9.21□□□□□ -0.94
CCDC43-204ENST00000588687 MPLKIPQ8TAP9 179 aa9.21□□□□□ -0.94
CCDC43-204ENST00000588687 C12orf57Q99622 126 aa9.2□□□□□ -0.94
CCDC43-204ENST00000588687 A0A087WSZ3 146 aa9.18□□□□□ -0.94
CCDC43-204ENST00000588687 DSCR10P59022 87 aa9.18□□□□□ -0.94
CCDC43-204ENST00000588687 TEN1Q86WV5 123 aa9.18□□□□□ -0.94
CCDC43-204ENST00000588687 HRES1P13985 223 aa9.15□□□□□ -0.94
CCDC43-204ENST00000588687 FAM218AQ96MZ4 157 aa9.14□□□□□ -0.95
CCDC43-204ENST00000588687 NDUFV3P56181 108 aaKnown RBP9.13□□□□□ -0.95
CCDC43-204ENST00000588687 HIST1H2BLQ99880 126 aa9.12□□□□□ -0.95
CCDC43-204ENST00000588687 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
CCDC43-204ENST00000588687 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
CCDC43-204ENST00000588687 KRTAP10-10P60014 251 aa9.1□□□□□ -0.95
CCDC43-204ENST00000588687 HIST3H2BBQ8N257 126 aa9.1□□□□□ -0.95
CCDC43-204ENST00000588687 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
CCDC43-204ENST00000588687 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
CCDC43-204ENST00000588687 HSBP1L1C9JCN9 74 aa9.08□□□□□ -0.96
CCDC43-204ENST00000588687 HIST1H4GQ99525 98 aa9.08□□□□□ -0.96
CCDC43-204ENST00000588687 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
CCDC43-204ENST00000588687 NOTCH2NLQ7Z3S9 236 aa9.07□□□□□ -0.96
CCDC43-204ENST00000588687 H3BMG7 143 aa9.05□□□□□ -0.96
CCDC43-204ENST00000588687 LINC00313P59037 77 aa9.05□□□□□ -0.96
CCDC43-204ENST00000588687 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
CCDC43-204ENST00000588687 H0YGX0 51 aa9.03□□□□□ -0.96
CCDC43-204ENST00000588687 COX8AP10176 69 aa9.02□□□□□ -0.97
CCDC43-204ENST00000588687 A0A0B4J2C4 111 aa9.01□□□□□ -0.97
CCDC43-204ENST00000588687 KRTAP19-6Q3LI70 58 aa9.01□□□□□ -0.97
CCDC43-204ENST00000588687 IGKV4-1P06312 121 aa9□□□□□ -0.97
CCDC43-204ENST00000588687 DLEU1O43261 78 aa8.99□□□□□ -0.97
CCDC43-204ENST00000588687 S100A2P29034 98 aa8.98□□□□□ -0.97
CCDC43-204ENST00000588687 RAB37Q96AX2 223 aa8.98□□□□□ -0.97
CCDC43-204ENST00000588687 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
CCDC43-204ENST00000588687 A0A1B0GX51 115 aa8.97□□□□□ -0.97
CCDC43-204ENST00000588687 SNCGO76070 127 aa8.97□□□□□ -0.97
CCDC43-204ENST00000588687 LINC00472Q9H8W2 130 aa8.97□□□□□ -0.97
CCDC43-204ENST00000588687 FABP2P12104 132 aa8.96□□□□□ -0.98
CCDC43-204ENST00000588687 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
CCDC43-204ENST00000588687 HIGD1BQ9P298 99 aa8.93□□□□□ -0.98
CCDC43-204ENST00000588687 GHRHP01286 108 aa8.92□□□□□ -0.98
CCDC43-204ENST00000588687 C2orf91Q6ZV80 131 aa8.92□□□□□ -0.98
CCDC43-204ENST00000588687 IGHV6-1A0A0B4J1U7 121 aa8.9□□□□□ -0.98
CCDC43-204ENST00000588687 TRIAP1O43715 76 aa8.89□□□□□ -0.99
CCDC43-204ENST00000588687 ANKRD29Q8N6D5 301 aa8.89□□□□□ -0.99
CCDC43-204ENST00000588687 C14orf144Q96I85 54 aa8.89□□□□□ -0.99
CCDC43-204ENST00000588687 A0A1B0GV72 72 aa8.88□□□□□ -0.99
CCDC43-204ENST00000588687 PRO1854Q9UHT4 67 aa8.87□□□□□ -0.99
CCDC43-204ENST00000588687 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
CCDC43-204ENST00000588687 CEND1Q8N111 149 aa8.84□□□□□ -0.99
CCDC43-204ENST00000588687 ZCCHC13Q8WW36 166 aaKnown RBP8.84□□□□□ -0.99
CCDC43-204ENST00000588687 LOC100996750A0A140TA64 210 aa8.83□□□□□ -1
CCDC43-204ENST00000588687 A0A1B0GVX0 72 aa8.83□□□□□ -1
CCDC43-204ENST00000588687 C8orf87E5RJ46 101 aa8.83□□□□□ -1
CCDC43-204ENST00000588687 CCKP06307 115 aa8.83□□□□□ -1
CCDC43-204ENST00000588687 FXYD2P54710 66 aa8.83□□□□□ -1
CCDC43-204ENST00000588687 SPINK7P58062 85 aa8.83□□□□□ -1
CCDC43-204ENST00000588687 MTURNQ8N3F0 131 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms